Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q5V1F1 (Q5V1F1_HALMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length637 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionphosphorelay sensor kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5V1F1 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 94F559C2E9578A36

FASTA63768,553
        10         20         30         40         50         60 
MFEQIRTYIY GQGSRSSDAT ARRADGGFVA SDGRTRFLTD AIDPDSPHLD DCFEDPDKAA 

        70         80         90        100        110        120 
IGTQHVERQF ELGPDELQAL IGDYEAAGIS QHEFVATQSF VTESLVEGAF DQLRDELGPD 

       130        140        150        160        170        180 
AQAAIDAVEA ELHDGLQTTQ SVSQAGVSAF TDSTADSNSS GGFDYHDILQ HIGTPLFVLD 

       190        200        210        220        230        240 
PDGDILSWNS SIENLTGVSE AEAKEMEMAS MAFYPDGRRG QTLADKVLDA PETTHTEYDV 

       250        260        270        280        290        300 
PKVEDEDFTL YRDTSVMADQ HGNERHISFS AAPIYDDDGE LIAVVEMVQD RTDEANRHEA 

       310        320        330        340        350        360 
VTSLVDEVKS TMAALKNGRL DARASFDRTD VGQYVDDQLY EVVGSLNDMA EQVEQLADQV 

       370        380        390        400        410        420 
DEQAQQLAVT IEQANSSAED VETRVTEQTD SLTEAADNIQ EIGAGMEEVA ATSSEVASAA 

       430        440        450        460        470        480 
QRAKAAAEDG SDAGEAVMDV TDGLAETSED LVDTVTDLDD QMDEVSEIVE IIADVAEQTN 

       490        500        510        520        530        540 
MLALNANIEA ARAGESGSGF AVVADEVKTL ANETSEYASE ISTSITTIQD QATETAEMVE 

       550        560        570        580        590        600 
TSHEQVEHAE SEIADALDAL DEISDAVEEA TRGIQEVADA NDDQASAIEN VTSMVEDAQN 

       610        620        630 
HAQEAETATK EIVKATDRQE DAVTELTDRV GELTNTN 

« Hide

References

[1]"Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea."
Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W., Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E., Hood L., Ng W.V.
Genome Res. 14:2221-2234(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY596297 Genomic DNA. Translation: AAV46651.1.
RefSeqYP_136357.1. NC_006396.1.

3D structure databases

ProteinModelPortalQ5V1F1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272569.rrnAC1752.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV46651; AAV46651; rrnAC1752.
GeneID3129485.
KEGGhma:rrnAC1752.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000038304.
OMAANQTHEH.
ProtClustDBCLSK395588.

Enzyme and pathway databases

BioCycHMAR272569:GJDH-1593-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5V1F1_HALMA
AccessionPrimary (citable) accession number: Q5V1F1
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: April 16, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)