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Q5V058 (Q5V058_HALMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5V058 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 754241574141C9D6

FASTA37041,638
        10         20         30         40         50         60 
MSRDWGSLFD IDTGPEDLLE HFDTEWFRGQ RYRHLSDERH GVERGTALVG DVIVRGYPSM 

        70         80         90        100        110        120 
PRALVLEPAI RETFDGPVAI EEKLNGYNVR VARIDGDLLA FTRSGFVCPY TTRKVEALLD 

       130        140        150        160        170        180 
AEAFFDDHPE QMLCGELVGP ENPYTDHDYS EVDEVGFYVF GIRHRETGTP MGVERRLDQC 

       190        200        210        220        230        240 
TTYGLDSVGH YGTFTPTAAV DAARERIDDL NARGREGVVL KSADGETALK YTTSAIHRAD 

       250        260        270        280        290        300 
LEHAFELPFD YGRDFVFTRV IREAFQAVER GESPAAVRER ARELGEAILE PAVETVRAVD 

       310        320        330        340        350        360 
AGDPVGETHT VRGDPRTIDD LLSYFHDQGL ELHVEHDETD GDQRVVTFTK IAQSTRDKTR 

       370 
YYLEGGTIDE 

« Hide

References

[1]"Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea."
Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W., Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E., Hood L., Ng W.V.
Genome Res. 14:2221-2234(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY596297 Genomic DNA. Translation: AAV47095.1.
RefSeqYP_136801.1. NC_006396.1.

3D structure databases

ProteinModelPortalQ5V058.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272569.rrnAC2266.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV47095; AAV47095; rrnAC2266.
GeneID3128643.
KEGGhma:rrnAC2266.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.
ProtClustDBCLSK862643.

Enzyme and pathway databases

BioCycHMAR272569:GJDH-2040-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5V058_HALMA
AccessionPrimary (citable) accession number: Q5V058
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)