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Protein
Submitted name:

MCP domain signal transducer

Gene

htr6

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MCP domain signal transducerImported
Gene namesi
Name:htr6Imported
Ordered Locus Names:rrnAC2760Imported
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)Imported
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei25 – 48HelicalSequence analysisAdd BLAST24
Transmembranei297 – 316HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272569.rrnAC2760.

Structurei

3D structure databases

ProteinModelPortaliQ5UYY0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini317 – 369HAMPInterPro annotationAdd BLAST53
Domaini404 – 457HAMPInterPro annotationAdd BLAST54
Domaini476 – 712Methyl-accepting transducerInterPro annotationAdd BLAST237

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili361 – 416Sequence analysisAdd BLAST56
Coiled coili495 – 525Sequence analysisAdd BLAST31
Coiled coili617 – 644Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000038212.
OMAiGRQTVGP.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5UYY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGPLDGLA SALDRVAPEF IRQRFAAKFA VAFLAVLLVI AGAGAFTFQA
60 70 80 90 100
TSTAVEQQTT EQLAETSQLE GDSIGSWVEQ QRTHTRSISQ GEPLRSDRRA
110 120 130 140 150
AAYILLQDQL LPDDVVSMHL VNESRGEVVA STELPLEGRS LSELDAPWTA
160 170 180 190 200
AEVPEGPGNN TQVWSSSRSY RSPVLNDEPV MAFASSVPKR DGSHLVVVTR
210 220 230 240 250
IQSQVDRLSD TNSTKETTIL NTNDETVLNI DREFDAATHS ESLAAIRDAN
260 270 280 290 300
GTAAPVTAVS DGRVYAFAPV PTTNWVTVTS LDTAQAFSVR DTVGQTVGLL
310 320 330 340 350
VLLALVSLSA VGLVLGKRTV DPLKQLRDRA ERIEAGNFDV DLSTNRADEI
360 370 380 390 400
GRLYGTFDDM RISLQNRIQE AEDAVEEAKT ARSEAEELRT EAEDARAEAE
410 420 430 440 450
EASQRLQERA TEYSAVMQEI ADGDLTKRLD EDAEETAMRE VAVEFNAMLD
460 470 480 490 500
GLEATVSEVA AFADEVADAT IEVATGAEEI ETTSQTVSDR IQEIADGAIR
510 520 530 540 550
QHDDLEEAAA EMDELSASIE EVAASSTTVA ETAREAVDRG ETGREAAESA
560 570 580 590 600
IDDMAEIESR SADAVDQILA LQKRMDDIGE IVDFISDIAE QTNMLALNAN
610 620 630 640 650
IEAARADKDG EGFAVVADEV KNLAEETKQA AAEIEAEIAA VQTETDETVT
660 670 680 690 700
DIRATSDHID TGVKTVREAA DAIADTVDAI ENANDGIQEI ADATEDQADA
710 720 730 740 750
TQSVVHRVDG VSEISQNVTE DAEQVSAAAE EQSASVAEIA QSADELRDRA
760 770
DSLAATVDEF DTSSREDDHS DVGGQR
Length:776
Mass (Da):83,197
Last modified:December 7, 2004 - v1
Checksum:i683F3656E7D61629
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV47523.1.
RefSeqiWP_011224412.1. NC_006396.1.

Genome annotation databases

EnsemblBacteriaiAAV47523; AAV47523; rrnAC2760.
GeneIDi3128957.
KEGGihma:rrnAC2760.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV47523.1.
RefSeqiWP_011224412.1. NC_006396.1.

3D structure databases

ProteinModelPortaliQ5UYY0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC2760.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV47523; AAV47523; rrnAC2760.
GeneIDi3128957.
KEGGihma:rrnAC2760.

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000038212.
OMAiGRQTVGP.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5UYY0_HALMA
AccessioniPrimary (citable) accession number: Q5UYY0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: November 2, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.