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Protein

Putative poly(A) polymerase catalytic subunit

Gene

MIMI_R341

Organism
Acanthamoeba polyphaga mimivirus (APMV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Polymerase that creates the 3'-poly(A) tail of mRNA's.Curated

Catalytic activityi

ATP + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

mRNA processing, Transcription

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative poly(A) polymerase catalytic subunit (EC:2.7.7.19)
Gene namesi
Ordered Locus Names:MIMI_R341
OrganismiAcanthamoeba polyphaga mimivirus (APMV)
Taxonomic identifieri212035 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageMimiviridaeMimivirus
Virus hostiAcanthamoeba polyphaga (Amoeba) [TaxID: 5757]
ProteomesiUP000001134 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

  • virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 584584Putative poly(A) polymerase catalytic subunitPRO_0000253421Add
BLAST

Structurei

Secondary structure

1
584
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi19 – 4123Combined sources
Beta strandi42 – 443Combined sources
Helixi46 – 6318Combined sources
Beta strandi66 – 683Combined sources
Helixi69 – 8012Combined sources
Helixi82 – 843Combined sources
Beta strandi95 – 1017Combined sources
Helixi102 – 11514Combined sources
Beta strandi122 – 1254Combined sources
Beta strandi131 – 1388Combined sources
Beta strandi140 – 1467Combined sources
Helixi149 – 1546Combined sources
Beta strandi157 – 1604Combined sources
Beta strandi163 – 1664Combined sources
Helixi168 – 17912Combined sources
Helixi182 – 20322Combined sources
Helixi220 – 23112Combined sources
Turni232 – 2354Combined sources
Turni237 – 2393Combined sources
Beta strandi243 – 2464Combined sources
Helixi247 – 25711Combined sources
Turni277 – 2804Combined sources
Beta strandi286 – 2916Combined sources
Helixi294 – 30815Combined sources
Beta strandi309 – 3113Combined sources
Helixi312 – 3143Combined sources
Beta strandi315 – 3206Combined sources
Turni324 – 3263Combined sources
Beta strandi330 – 3378Combined sources
Beta strandi339 – 3457Combined sources
Beta strandi351 – 3544Combined sources
Helixi377 – 39317Combined sources
Helixi397 – 42125Combined sources
Beta strandi427 – 4293Combined sources
Beta strandi438 – 4403Combined sources
Helixi445 – 45915Combined sources
Helixi469 – 4724Combined sources
Helixi477 – 4826Combined sources
Helixi501 – 5033Combined sources
Beta strandi505 – 5084Combined sources
Beta strandi514 – 5163Combined sources
Beta strandi524 – 5263Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4WSEX-ray2.84A/B1-584[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Sequencei

Sequence statusi: Complete.

Q5UQS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKNKTRAEK YQTYYTTNEY QIVKEKLPDI IRDAEIKASE VLEPTIYEKR
60 70 80 90 100
AIMEVIKDFI RDHQRKVYGG TALNEALKQV NPKDAIYDNY SFSDIEFYSP
110 120 130 140 150
TPVQDLVDLC NILYRKGYKF VQGKDAQHEE TYSIFVNFQL YCDITYSPTR
160 170 180 190 200
VFYGIKTIEI DGINYTDPHF MLIDYLRMVN QPLTAAGQRW EKAFERMYRL
210 220 230 240 250
LKDYPIEDFD KRLDIPEPPE EIQSYISRIK TEFLSDNKLN ESFLISGIEA
260 270 280 290 300
YNFYIRHAAS SKDEEQMART NRNVVNLNNF IANVPFSELI SVNYREDVKN
310 320 330 340 350
TYNFLRMIVE DKEKISVDEY FPLFQFTGYS TVIKYDDHPI IRIYEGDGYC
360 370 380 390 400
IPNVKTVKTV ENDNGTKTKY EYKYVSFQYV LMILYINKFR AHLDKNKPMY
410 420 430 440 450
FNYGIAISNL VKARNIYLDQ TGKSVLDNTV FKEFRTNCTG NTISFTRMNR
460 470 480 490 500
LRLLEKRKQG KQTSFVYTPE DFFKKDLETQ AKLDPSKARF KNTSGNKIMV
510 520 530 540 550
PKYLLFKIDN NGNIEDNIHS EEAEISEKEE TSGGSSISTD KSFEESPNSS
560 570 580
PNSSPNNSLN NSIDISTNNY DDRSENSLDS LTSD
Length:584
Mass (Da):68,247
Last modified:December 7, 2004 - v1
Checksum:iD14A33890DE87406
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50610.1.
RefSeqiYP_003986843.1. NC_014649.1.

Genome annotation databases

GeneIDi9924958.
KEGGivg:9924958.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50610.1.
RefSeqiYP_003986843.1. NC_014649.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4WSEX-ray2.84A/B1-584[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9924958.
KEGGivg:9924958.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rowbotham-Bradford.
  2. Abergel C.
    Unpublished observations (SEP-2007)
    Cited for: SIMILARITY.
  3. "Mimivirus giant particles incorporate a large fraction of anonymous and unique gene products."
    Renesto P., Abergel C., Decloquement P., Moinier D., Azza S., Ogata H., Fourquet P., Gorvel J.-P., Claverie J.-M., Raoult D.
    J. Virol. 80:11678-11685(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], SUBCELLULAR LOCATION.

Entry informationi

Entry nameiPAP1_MIMIV
AccessioniPrimary (citable) accession number: Q5UQS6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: December 7, 2004
Last modified: June 24, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.