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Protein

Putative poly(A) polymerase catalytic subunit

Gene

MIMI_R341

Organism
Acanthamoeba polyphaga mimivirus (APMV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Polymerase that creates the 3'-poly(A) tail of mRNA's.Curated

Catalytic activityi

ATP + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

mRNA processing, Transcription

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative poly(A) polymerase catalytic subunit (EC:2.7.7.19)
Gene namesi
Ordered Locus Names:MIMI_R341
OrganismiAcanthamoeba polyphaga mimivirus (APMV)
Taxonomic identifieri212035 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageMimiviridaeMimivirus
Virus hostiAcanthamoeba polyphaga (Amoeba) [TaxID: 5757]
Proteomesi
  • UP000001134 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

  • virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002534211 – 584Putative poly(A) polymerase catalytic subunitAdd BLAST584

Structurei

Secondary structure

1584
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi19 – 41Combined sources23
Beta strandi42 – 44Combined sources3
Helixi46 – 63Combined sources18
Beta strandi66 – 68Combined sources3
Helixi69 – 80Combined sources12
Helixi82 – 84Combined sources3
Beta strandi95 – 101Combined sources7
Helixi102 – 115Combined sources14
Beta strandi122 – 125Combined sources4
Beta strandi131 – 138Combined sources8
Beta strandi140 – 146Combined sources7
Helixi149 – 154Combined sources6
Beta strandi157 – 160Combined sources4
Beta strandi163 – 166Combined sources4
Helixi168 – 179Combined sources12
Helixi182 – 203Combined sources22
Helixi220 – 231Combined sources12
Turni232 – 235Combined sources4
Turni237 – 239Combined sources3
Beta strandi243 – 246Combined sources4
Helixi247 – 257Combined sources11
Turni277 – 280Combined sources4
Beta strandi286 – 291Combined sources6
Helixi294 – 308Combined sources15
Beta strandi309 – 311Combined sources3
Helixi312 – 314Combined sources3
Beta strandi315 – 320Combined sources6
Turni324 – 326Combined sources3
Beta strandi330 – 337Combined sources8
Beta strandi339 – 345Combined sources7
Beta strandi351 – 354Combined sources4
Helixi377 – 393Combined sources17
Helixi397 – 421Combined sources25
Beta strandi427 – 429Combined sources3
Beta strandi438 – 440Combined sources3
Helixi445 – 459Combined sources15
Helixi469 – 472Combined sources4
Helixi477 – 482Combined sources6
Helixi501 – 503Combined sources3
Beta strandi505 – 508Combined sources4
Beta strandi514 – 516Combined sources3
Beta strandi524 – 526Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4WSEX-ray2.84A/B1-584[»]
SMRiQ5UQS6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Sequencei

Sequence statusi: Complete.

Q5UQS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKNKTRAEK YQTYYTTNEY QIVKEKLPDI IRDAEIKASE VLEPTIYEKR
60 70 80 90 100
AIMEVIKDFI RDHQRKVYGG TALNEALKQV NPKDAIYDNY SFSDIEFYSP
110 120 130 140 150
TPVQDLVDLC NILYRKGYKF VQGKDAQHEE TYSIFVNFQL YCDITYSPTR
160 170 180 190 200
VFYGIKTIEI DGINYTDPHF MLIDYLRMVN QPLTAAGQRW EKAFERMYRL
210 220 230 240 250
LKDYPIEDFD KRLDIPEPPE EIQSYISRIK TEFLSDNKLN ESFLISGIEA
260 270 280 290 300
YNFYIRHAAS SKDEEQMART NRNVVNLNNF IANVPFSELI SVNYREDVKN
310 320 330 340 350
TYNFLRMIVE DKEKISVDEY FPLFQFTGYS TVIKYDDHPI IRIYEGDGYC
360 370 380 390 400
IPNVKTVKTV ENDNGTKTKY EYKYVSFQYV LMILYINKFR AHLDKNKPMY
410 420 430 440 450
FNYGIAISNL VKARNIYLDQ TGKSVLDNTV FKEFRTNCTG NTISFTRMNR
460 470 480 490 500
LRLLEKRKQG KQTSFVYTPE DFFKKDLETQ AKLDPSKARF KNTSGNKIMV
510 520 530 540 550
PKYLLFKIDN NGNIEDNIHS EEAEISEKEE TSGGSSISTD KSFEESPNSS
560 570 580
PNSSPNNSLN NSIDISTNNY DDRSENSLDS LTSD
Length:584
Mass (Da):68,247
Last modified:December 7, 2004 - v1
Checksum:iD14A33890DE87406
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50610.1.
RefSeqiYP_003986843.1. NC_014649.1.

Genome annotation databases

GeneIDi9924958.
KEGGivg:9924958.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50610.1.
RefSeqiYP_003986843.1. NC_014649.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4WSEX-ray2.84A/B1-584[»]
SMRiQ5UQS6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9924958.
KEGGivg:9924958.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiPAP1_MIMIV
AccessioniPrimary (citable) accession number: Q5UQS6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: December 7, 2004
Last modified: November 2, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.