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Q5UQS6 (PAP1_MIMIV) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative poly(A) polymerase catalytic subunit

EC=2.7.7.19
Gene names
Ordered Locus Names:MIMI_R341
OrganismAcanthamoeba polyphaga mimivirus (APMV) [Reference proteome]
Taxonomic identifier212035 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageMimiviridaeMimivirus
Virus hostAcanthamoeba polyphaga (Amoeba) [TaxID: 5757]

Protein attributes

Sequence length584 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Polymerase that creates the 3'-poly(A) tail of mRNA's Potential.

Catalytic activity

ATP + RNA(n) = diphosphate + RNA(n+1).

Subcellular location

Virion.

Sequence similarities

Belongs to the poxviridae poly(A) polymerase catalytic subunit family. Highly divergent.

Ontologies

Keywords
   Biological processmRNA processing
Transcription
   Cellular componentVirion
   LigandATP-binding
Nucleotide-binding
   Molecular functionTransferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processmRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentvirion

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

polynucleotide adenylyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 584584Putative poly(A) polymerase catalytic subunit
PRO_0000253421

Sequences

Sequence LengthMass (Da)Tools
Q5UQS6 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: D14A33890DE87406

FASTA58468,247
        10         20         30         40         50         60 
MLKNKTRAEK YQTYYTTNEY QIVKEKLPDI IRDAEIKASE VLEPTIYEKR AIMEVIKDFI 

        70         80         90        100        110        120 
RDHQRKVYGG TALNEALKQV NPKDAIYDNY SFSDIEFYSP TPVQDLVDLC NILYRKGYKF 

       130        140        150        160        170        180 
VQGKDAQHEE TYSIFVNFQL YCDITYSPTR VFYGIKTIEI DGINYTDPHF MLIDYLRMVN 

       190        200        210        220        230        240 
QPLTAAGQRW EKAFERMYRL LKDYPIEDFD KRLDIPEPPE EIQSYISRIK TEFLSDNKLN 

       250        260        270        280        290        300 
ESFLISGIEA YNFYIRHAAS SKDEEQMART NRNVVNLNNF IANVPFSELI SVNYREDVKN 

       310        320        330        340        350        360 
TYNFLRMIVE DKEKISVDEY FPLFQFTGYS TVIKYDDHPI IRIYEGDGYC IPNVKTVKTV 

       370        380        390        400        410        420 
ENDNGTKTKY EYKYVSFQYV LMILYINKFR AHLDKNKPMY FNYGIAISNL VKARNIYLDQ 

       430        440        450        460        470        480 
TGKSVLDNTV FKEFRTNCTG NTISFTRMNR LRLLEKRKQG KQTSFVYTPE DFFKKDLETQ 

       490        500        510        520        530        540 
AKLDPSKARF KNTSGNKIMV PKYLLFKIDN NGNIEDNIHS EEAEISEKEE TSGGSSISTD 

       550        560        570        580 
KSFEESPNSS PNSSPNNSLN NSIDISTNNY DDRSENSLDS LTSD 

« Hide

References

« Hide 'large scale' references
[1]"The 1.2-megabase genome sequence of Mimivirus."
Raoult D., Audic S., Robert C., Abergel C., Renesto P., Ogata H., La Scola B., Susan M., Claverie J.-M.
Science 306:1344-1350(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Rowbotham-Bradford.
[2]Abergel C.
Unpublished observations (SEP-2007)
Cited for: SIMILARITY.
[3]"Mimivirus giant particles incorporate a large fraction of anonymous and unique gene products."
Renesto P., Abergel C., Decloquement P., Moinier D., Azza S., Ogata H., Fourquet P., Gorvel J.-P., Claverie J.-M., Raoult D.
J. Virol. 80:11678-11685(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], SUBCELLULAR LOCATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY653733 Genomic DNA. Translation: AAV50610.1.
RefSeqYP_003986843.1. NC_014649.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9924958.

Phylogenomic databases

ProtClustDBCLSP2510026.

Family and domain databases

ProtoNetSearch...

Entry information

Entry namePAP1_MIMIV
AccessionPrimary (citable) accession number: Q5UQS6
Entry history
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: December 7, 2004
Last modified: February 19, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families