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Q5UP54

- YR596_MIMIV

UniProt

Q5UP54 - YR596_MIMIV

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Protein

Probable FAD-linked sulfhydryl oxidase R596

Gene

MIMI_R596

Organism
Acanthamoeba polyphaga mimivirus (APMV)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation.PROSITE-ProRule annotation

Catalytic activityi

2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + H2O2.

Cofactori

FADPROSITE-ProRule annotation

GO - Molecular functioni

  1. thiol oxidase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Probable FAD-linked sulfhydryl oxidase R596 (EC:1.8.3.2)
Gene namesi
Ordered Locus Names:MIMI_R596
OrganismiAcanthamoeba polyphaga mimivirus (APMV)
Taxonomic identifieri212035 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageMimiviridaeMimivirus
Virus hostiAcanthamoeba polyphaga (Amoeba) [TaxID: 5757]
ProteomesiUP000001134: Genome

Subcellular locationi

Virion 1 Publication

GO - Cellular componenti

  1. virion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 292292Probable FAD-linked sulfhydryl oxidase R596PRO_0000247371Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi80 ↔ 83Redox-activePROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Structurei

Secondary structure

1
292
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi37 – 5317Combined sources
Helixi61 – 7717Combined sources
Beta strandi78 – 803Combined sources
Helixi81 – 9010Combined sources
Helixi94 – 963Combined sources
Helixi100 – 1034Combined sources
Helixi106 – 12318Combined sources
Helixi132 – 1409Combined sources
Helixi160 – 17112Combined sources
Helixi180 – 1834Combined sources
Helixi184 – 1863Combined sources
Helixi187 – 1926Combined sources
Helixi197 – 2004Combined sources
Helixi201 – 2088Combined sources
Turni209 – 2113Combined sources
Helixi213 – 2164Combined sources
Helixi221 – 23818Combined sources
Turni249 – 2524Combined sources
Helixi256 – 2627Combined sources
Turni263 – 2653Combined sources
Helixi271 – 29020Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3GWNX-ray1.78A/B33-145[»]
3TD7X-ray2.21A1-292[»]
ProteinModelPortaliQ5UP54.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5UP54.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 139107ERV/ALR sulfhydryl oxidasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ERV/ALR sulfhydryl oxidase domain.PROSITE-ProRule annotation

Family and domain databases

Gene3Di1.20.120.310. 1 hit.
InterProiIPR017905. ERV/ALR_sulphydryl_oxidase.
[Graphical view]
PfamiPF04777. Evr1_Alr. 1 hit.
[Graphical view]
SUPFAMiSSF69000. SSF69000. 1 hit.
PROSITEiPS51324. ERV_ALR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5UP54-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLSKQVVPT HRVEIAPNSE STCKMDHSNY QHNGLITKIW GTAGWTFNHA
60 70 80 90 100
VTFGYPLNPT SDDKRRYKNY FISLGDVLPC RLCRESYKKF ITTGKTALTN
110 120 130 140 150
EVLRNRHTLT KWFYDVHNAV NNKLEVDYGL SYEDVVNKYE SFRAKCGKPV
160 170 180 190 200
PTVKGCVTPL DHKAFSFKKL YYMDAPIVSL DKVENFVRIA RMRGISDKYF
210 220 230 240 250
CFLELATVLN GDFNELKKQS SWEYRNKYCQ KKIRHMRENA IPSIEEQGYW
260 270 280 290
KGTPTIDELK LLLFLCSNLN RTEVNDAINN VERLESTHYI EN
Length:292
Mass (Da):33,998
Last modified:December 7, 2004 - v1
Checksum:i5FEBA7FD1B7F526B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50859.1.
RefSeqiYP_003987112.1. NC_014649.1.

Genome annotation databases

GeneIDi9925233.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA. Translation: AAV50859.1 .
RefSeqi YP_003987112.1. NC_014649.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3GWN X-ray 1.78 A/B 33-145 [» ]
3TD7 X-ray 2.21 A 1-292 [» ]
ProteinModelPortali Q5UP54.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9925233.

Miscellaneous databases

EvolutionaryTracei Q5UP54.

Family and domain databases

Gene3Di 1.20.120.310. 1 hit.
InterProi IPR017905. ERV/ALR_sulphydryl_oxidase.
[Graphical view ]
Pfami PF04777. Evr1_Alr. 1 hit.
[Graphical view ]
SUPFAMi SSF69000. SSF69000. 1 hit.
PROSITEi PS51324. ERV_ALR. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rowbotham-Bradford.
  2. "Mimivirus giant particles incorporate a large fraction of anonymous and unique gene products."
    Renesto P., Abergel C., Decloquement P., Moinier D., Azza S., Ogata H., Fourquet P., Gorvel J.-P., Claverie J.-M., Raoult D.
    J. Virol. 80:11678-11685(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], SUBCELLULAR LOCATION.

Entry informationi

Entry nameiYR596_MIMIV
AccessioniPrimary (citable) accession number: Q5UP54
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2006
Last sequence update: December 7, 2004
Last modified: November 26, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3