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Protein

Allergen Fra a 1

Gene
N/A
Organism
Fragaria ananassa (Strawberry)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May be involved in ripening of fruits.

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Fruit ripening, Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Allergen Fra a 1
Alternative name(s):
Allergen: Fra a 1
OrganismiFragaria ananassa (Strawberry)
Taxonomic identifieri3747 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeRosoideaePotentilleaeFragariinaeFragaria

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human. Binds to IgE (Probable).1 Publication

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei2124. Fra a 1.
3286. Fra a 1.0101.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 100›100Allergen Fra a 1PRO_0000154189Add
BLAST

Proteomic databases

PRIDEiQ5ULZ4.

Structurei

3D structure databases

ProteinModelPortaliQ5ULZ4.
SMRiQ5ULZ4. Positions 22-100.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the BetVI family.Curated

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR023393. START-like_dom.
[Graphical view]

Sequencei

Sequence statusi: Fragments.

Q5ULZ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AFVLDADNLI PKKITFGEGS QYGYVKVEGD ALSDTLEKID YETKLVSAPS
60 70 80 90 100
SSTIIKTTSK YHTKGDVEIK EEHVKAGKEK AAHLFKLIEG YLKDHPSEYN
Length:100
Mass (Da):11,120
Last modified:March 1, 2005 - v2
Checksum:iCE5BF0329BB7F09D
GO

Sequence cautioni

The sequence AAV33460.1 differs from that shown. Reason: Frameshift at positions 35 and 52. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11
Non-adjacent residuesi12 – 132Curated
Non-adjacent residuesi26 – 272Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY679601 mRNA. Translation: AAV33460.1. Frameshift.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY679601 mRNA. Translation: AAV33460.1. Frameshift.

3D structure databases

ProteinModelPortaliQ5ULZ4.
SMRiQ5ULZ4. Positions 22-100.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei2124. Fra a 1.
3286. Fra a 1.0101.

Proteomic databases

PRIDEiQ5ULZ4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR023393. START-like_dom.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Bet v 1 homologues in strawberry identified as IgE-binding proteins and presumptive allergens."
    Karlsson A.L., Alm R., Ekstrand B., Fjelkner-Modig S., Schioett A., Bengtsson U., Bjoerk L., Hjernoe K., Roepstorff P., Emanuelsson C.S.
    Allergy 59:1277-1284(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 1-26, ALLERGEN.
  2. "Identification of novel genes involved in ripening of strawberry fruits."
    Balogh A., Koncz T., Kiss E., Heszky L.E.
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 27-100.
    Tissue: Receptacle.

Entry informationi

Entry nameiFRAA_FRAAN
AccessioniPrimary (citable) accession number: Q5ULZ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: March 1, 2005
Last modified: October 14, 2015
This is version 46 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Direct protein sequencing

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.