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Q5U458

- DJC11_MOUSE

UniProt

Q5U458 - DJC11_MOUSE

Protein

DnaJ homolog subfamily C member 11

Gene

Dnajc11

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 2 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    Keywords - Molecular functioni

    Chaperone

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DnaJ homolog subfamily C member 11
    Gene namesi
    Name:Dnajc11
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 4

    Organism-specific databases

    MGIiMGI:2443386. Dnajc11.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial inner membrane Source: MGI
    2. mitochondrion Source: MGI

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 559558DnaJ homolog subfamily C member 11PRO_0000247158Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei2 – 21N-acetylalanineBy similarity

    Keywords - PTMi

    Acetylation

    Proteomic databases

    MaxQBiQ5U458.
    PaxDbiQ5U458.
    PRIDEiQ5U458.

    PTM databases

    PhosphoSiteiQ5U458.

    Expressioni

    Gene expression databases

    ArrayExpressiQ5U458.
    BgeeiQ5U458.
    CleanExiMM_DNAJC11.
    GenevestigatoriQ5U458.

    Interactioni

    Protein-protein interaction databases

    IntActiQ5U458. 2 interactions.
    MINTiMINT-4114586.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5U458.
    SMRiQ5U458. Positions 14-82.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini14 – 8269JPROSITE-ProRule annotationAdd
    BLAST

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili415 – 45743Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the DNAJC11 family.Curated
    Contains 1 J domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiCOG0484.
    GeneTreeiENSGT00720000108827.
    HOGENOMiHOG000231113.
    HOVERGENiHBG080125.
    InParanoidiA2A8C9.
    KOiK09531.
    OMAiFYLAIQR.
    OrthoDBiEOG70GMFJ.
    TreeFamiTF105170.

    Family and domain databases

    Gene3Di1.10.287.110. 1 hit.
    InterProiIPR024586. DnaJ-like_C11_C.
    IPR001623. DnaJ_domain.
    IPR018253. DnaJ_domain_CS.
    [Graphical view]
    PfamiPF00226. DnaJ. 1 hit.
    PF11875. DUF3395. 1 hit.
    [Graphical view]
    PRINTSiPR00625. JDOMAIN.
    SMARTiSM00271. DnaJ. 1 hit.
    [Graphical view]
    SUPFAMiSSF46565. SSF46565. 1 hit.
    PROSITEiPS00636. DNAJ_1. 1 hit.
    PS50076. DNAJ_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5U458-1 [UniParc]FASTAAdd to Basket

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    MATALSEEEL DNEDYYSLLN VRREASSEEL KAAYRRLCML YHPDKHRDPE    50
    LKSQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERKRTP 100
    AEIREEFERL QREREERRLQ QRTNPKGTIS VGVDATDLFD RYDEEYEDVS 150
    GSGFPQIEIN KMHISQSIEA PLTATDTAIL SGSLSTQNGN GGGSVNFALR 200
    RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI 250
    RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT CHFTVALQLG 300
    IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTIVEYGAE RKISRHSVLG 350
    AAVSIGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAVF YATVGPLVVY 400
    LAVHRLIIRP YLRAQKEKEL EKQRENTASD ILQKKQEAEA AVRLMQESVR 450
    RIIEAEESRM GLIIVNAWYG KFVNDKSRKN EKVKVIDVTV PLQCLVKDSK 500
    LILTEASKAG LPGFYDPCVG EEKSLRVLYQ FRGVLHQVMV PDSEALRIPK 550
    QSHRIDTDG 559
    Length:559
    Mass (Da):63,233
    Last modified:July 27, 2011 - v2
    Checksum:iDA6B7590EC7D2561
    GO

    Sequence cautioni

    The sequence BAC41027.1 differs from that shown. Reason: Probable cloning artifact.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti195 – 1951V → I in BAC41027. (PubMed:16141072)Curated
    Sequence conflicti195 – 1951V → I in BAE42661. (PubMed:16141072)Curated
    Sequence conflicti195 – 1951V → I in BAE43060. (PubMed:16141072)Curated
    Sequence conflicti195 – 1951V → I in AAH85257. (PubMed:15489334)Curated
    Sequence conflicti256 – 2561T → S in BAC41027. (PubMed:16141072)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK053156 mRNA. Translation: BAC35287.1.
    AK077544 mRNA. Translation: BAC36856.1.
    AK089983 mRNA. Translation: BAC41027.1. Sequence problems.
    AK171781 mRNA. Translation: BAE42661.1.
    AK172542 mRNA. Translation: BAE43060.1.
    AL611931 Genomic DNA. Translation: CAM25057.1.
    BC085257 mRNA. Translation: AAH85257.1.
    CCDSiCCDS18981.2.
    RefSeqiNP_766292.2. NM_172704.3.
    UniGeneiMm.21353.

    Genome annotation databases

    EnsembliENSMUST00000062904; ENSMUSP00000051643; ENSMUSG00000039768.
    GeneIDi230935.
    KEGGimmu:230935.
    UCSCiuc008vys.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK053156 mRNA. Translation: BAC35287.1 .
    AK077544 mRNA. Translation: BAC36856.1 .
    AK089983 mRNA. Translation: BAC41027.1 . Sequence problems.
    AK171781 mRNA. Translation: BAE42661.1 .
    AK172542 mRNA. Translation: BAE43060.1 .
    AL611931 Genomic DNA. Translation: CAM25057.1 .
    BC085257 mRNA. Translation: AAH85257.1 .
    CCDSi CCDS18981.2.
    RefSeqi NP_766292.2. NM_172704.3.
    UniGenei Mm.21353.

    3D structure databases

    ProteinModelPortali Q5U458.
    SMRi Q5U458. Positions 14-82.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q5U458. 2 interactions.
    MINTi MINT-4114586.

    PTM databases

    PhosphoSitei Q5U458.

    Proteomic databases

    MaxQBi Q5U458.
    PaxDbi Q5U458.
    PRIDEi Q5U458.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000062904 ; ENSMUSP00000051643 ; ENSMUSG00000039768 .
    GeneIDi 230935.
    KEGGi mmu:230935.
    UCSCi uc008vys.2. mouse.

    Organism-specific databases

    CTDi 55735.
    MGIi MGI:2443386. Dnajc11.

    Phylogenomic databases

    eggNOGi COG0484.
    GeneTreei ENSGT00720000108827.
    HOGENOMi HOG000231113.
    HOVERGENi HBG080125.
    InParanoidi A2A8C9.
    KOi K09531.
    OMAi FYLAIQR.
    OrthoDBi EOG70GMFJ.
    TreeFami TF105170.

    Miscellaneous databases

    NextBioi 380306.
    PROi Q5U458.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q5U458.
    Bgeei Q5U458.
    CleanExi MM_DNAJC11.
    Genevestigatori Q5U458.

    Family and domain databases

    Gene3Di 1.10.287.110. 1 hit.
    InterProi IPR024586. DnaJ-like_C11_C.
    IPR001623. DnaJ_domain.
    IPR018253. DnaJ_domain_CS.
    [Graphical view ]
    Pfami PF00226. DnaJ. 1 hit.
    PF11875. DUF3395. 1 hit.
    [Graphical view ]
    PRINTSi PR00625. JDOMAIN.
    SMARTi SM00271. DnaJ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46565. SSF46565. 1 hit.
    PROSITEi PS00636. DNAJ_1. 1 hit.
    PS50076. DNAJ_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J and NOD.
      Tissue: Embryo, Lung and Spleen.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: FVB/N.
      Tissue: Mammary tumor.

    Entry informationi

    Entry nameiDJC11_MOUSE
    AccessioniPrimary (citable) accession number: Q5U458
    Secondary accession number(s): A2A8C9
    , Q8BP83, Q8C1Z4, Q8C6U5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 25, 2006
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 82 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3