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Protein
Submitted name:

Zinc finger protein 78

Gene

Zfp78

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein 78Imported
Gene namesi
Name:Zfp78Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:107783 Zfp78

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000055150

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104199

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 85KRABInterPro annotationAdd BLAST72
Domaini205 – 232C2H2-typeInterPro annotationAdd BLAST28
Domaini233 – 260C2H2-typeInterPro annotationAdd BLAST28
Domaini261 – 288C2H2-typeInterPro annotationAdd BLAST28
Domaini289 – 316C2H2-typeInterPro annotationAdd BLAST28
Domaini317 – 344C2H2-typeInterPro annotationAdd BLAST28
Domaini345 – 372C2H2-typeInterPro annotationAdd BLAST28
Domaini373 – 400C2H2-typeInterPro annotationAdd BLAST28
Domaini401 – 428C2H2-typeInterPro annotationAdd BLAST28
Domaini429 – 456C2H2-typeInterPro annotationAdd BLAST28
Domaini457 – 484C2H2-typeInterPro annotationAdd BLAST28
Domaini485 – 512C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00840000129704
HOVERGENiHBG018163
KOiK09228
OMAiPFSDWES
OrthoDBiEOG091G02KC
TreeFamiTF337055

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 11 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 6 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 11 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits

Sequencei

Sequence statusi: Complete.

Q5U406-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVELMKAML QEAVTFNDVA IDFSPEEWDW LNPAQRSLYR TVVLENYRNL
60 70 80 90 100
VSVGACISKP SLISLLEHGK EPWEVKGQVT GSRVQGGKSV QKTHELSLRQ
110 120 130 140 150
LVFEDVAVEN TTSLGCESLT SGRKQKCKDL LDRQMSQEIF NLKETVTHKG
160 170 180 190 200
THTKEIGYKH TESLKSAHLD SVEENIYTHK SNKKSFSKNP KVWKYKKIWA
210 220 230 240 250
GKTIFKCNEC EKTFTHSSAV TVHQRIHTGE KPYQCTVCGK AFKQSHHLAQ
260 270 280 290 300
HHTTHTHEKL FQCEECKKAF SQNSYLTVHR RIHTGEKPYK CKECAKSFRQ
310 320 330 340 350
PAHLAQHHRI HTGEKPYKCE ICGKAFNHSM SLTGHQRVHS GEKPYKCKDC
360 370 380 390 400
GKAFRQSIHL VVHSRIHTGE EPYECNECGK TFRESSQLTI HQRNHTGEKP
410 420 430 440 450
FECKQCGKFF NRSAYLARHQ KIHTGEKPYE CNECGKTFTH AAYLIRHKRV
460 470 480 490 500
HTGEKPYKCA ECGKAFGDGS SRAQHQRLHT GQRPYVCEKC GRAFRRKSSL
510
NCHQRYHTGK KL
Length:512
Mass (Da):58,921
Last modified:December 7, 2004 - v1
Checksum:iBA0200A8DA492D78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC188607 Genomic DNA No translation available.
BC085322 mRNA Translation: AAH85322.1
RefSeqiNP_001020334.1, NM_001025163.1
XP_017177795.1, XM_017322306.1
XP_017177796.1, XM_017322307.1
UniGeneiMm.136456

Genome annotation databases

EnsembliENSMUST00000108559; ENSMUSP00000104199; ENSMUSG00000055150
ENSMUST00000207347; ENSMUSP00000147154; ENSMUSG00000055150
GeneIDi330463
KEGGimmu:330463
UCSCiuc009fbf.1 mouse

Similar proteinsi

Entry informationi

Entry nameiQ5U406_MOUSE
AccessioniPrimary (citable) accession number: Q5U406
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: February 28, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported