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Q5U3H3 (GL8D1_DANRE) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycosyltransferase 8 domain-containing protein 1

EC=2.4.1.-
Gene names
Name:glt8d1
ORF Names:zgc:103525
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length365 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Membrane; Single-pass type II membrane protein Potential.

Sequence similarities

Belongs to the glycosyltransferase 8 family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainSignal-anchor
Transmembrane
Transmembrane helix
   Molecular functionGlycosyltransferase
Transferase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functiontransferase activity, transferring glycosyl groups

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 365365Glycosyltransferase 8 domain-containing protein 1
PRO_0000288531

Regions

Topological domain1 – 44Cytoplasmic Potential
Transmembrane5 – 2218Helical; Signal-anchor for type II membrane protein; Potential
Topological domain23 – 365343Lumenal Potential

Amino acid modifications

Glycosylation1021N-linked (GlcNAc...) Potential
Glycosylation1811N-linked (GlcNAc...) Potential
Glycosylation2451N-linked (GlcNAc...) Potential
Glycosylation2531N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q5U3H3 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 0830DA1692F23E13

FASTA36541,353
        10         20         30         40         50         60 
MTVRRVNVVI LVLLVVAFLI VLHRNLLNLN DFLNQETSDT VPGMILPFET DFLLGRKAMR 

        70         80         90        100        110        120 
SGEEIPVLIT APEERLGAAV TAMNSIYRNS KANVVFNIVT LNESVVHLST WLSKTDLKHK 

       130        140        150        160        170        180 
IIVFDPSILL GKIPTDAQKM ETVRPLTFAR FYMPAFLPDA EKAIYLDDDV IVQGDIRELF 

       190        200        210        220        230        240 
NTSLKSGHVA AFSEDCDSAS SKGIVRGAGN QNSYIGYLDF KKEAIKKLGM RANTCSFNPG 

       250        260        270        280        290        300 
VFVANLTEWK QQNVTSQLEF WMERNAKEDL YSKTLADCMT TPPMLIVFYK HHSNIDPMWN 

       310        320        330        340        350        360 
VRHLGATGAG NRYSAQFVKA AKLLHWNGHY KPWGRTSSFS DIWDKWYIPD PTGKFHPIRK 


HVEEK 

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC085543 mRNA. Translation: AAH85543.1.
RefSeqNP_001007339.1. NM_001007338.1.
UniGeneDr.79325.

3D structure databases

ProteinModelPortalQ5U3H3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000058734.

Protein family/group databases

CAZyGT8. Glycosyltransferase Family 8.

Proteomic databases

PRIDEQ5U3H3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID492466.
KEGGdre:492466.

Organism-specific databases

CTD55830.
ZFINZDB-GENE-041114-23. glt8d1.

Phylogenomic databases

eggNOGNOG74598.
HOGENOMHOG000112730.
HOVERGENHBG055240.
InParanoidQ5U3H3.
PhylomeDBQ5U3H3.

Family and domain databases

Gene3D3.90.550.10. 1 hit.
InterProIPR002495. Glyco_trans_8.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamPF01501. Glyco_transf_8. 1 hit.
[Graphical view]
SUPFAMSSF53448. SSF53448. 1 hit.
ProtoNetSearch...

Other

NextBio20865026.
PROQ5U3H3.

Entry information

Entry nameGL8D1_DANRE
AccessionPrimary (citable) accession number: Q5U3H3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: December 7, 2004
Last modified: June 11, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families