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Protein

Glycosyltransferase 8 domain-containing protein 1

Gene

glt8d1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT8. Glycosyltransferase Family 8.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycosyltransferase 8 domain-containing protein 1 (EC:2.4.1.-)
Gene namesi
Name:glt8d1
ORF Names:zgc:103525
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437 Componenti: Unplaced

Organism-specific databases

ZFINiZDB-GENE-041114-23. glt8d1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 44CytoplasmicSequence Analysis
Transmembranei5 – 2218Helical; Signal-anchor for type II membrane proteinSequence AnalysisAdd
BLAST
Topological domaini23 – 365343LumenalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 365365Glycosyltransferase 8 domain-containing protein 1PRO_0000288531Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi102 – 1021N-linked (GlcNAc...)Sequence Analysis
Glycosylationi181 – 1811N-linked (GlcNAc...)Sequence Analysis
Glycosylationi245 – 2451N-linked (GlcNAc...)Sequence Analysis
Glycosylationi253 – 2531N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiQ5U3H3.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000058734.

Structurei

3D structure databases

ProteinModelPortaliQ5U3H3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 8 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG74598.
HOGENOMiHOG000112730.
HOVERGENiHBG055240.
InParanoidiQ5U3H3.
PhylomeDBiQ5U3H3.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR002495. Glyco_trans_8.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF01501. Glyco_transf_8. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5U3H3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVRRVNVVI LVLLVVAFLI VLHRNLLNLN DFLNQETSDT VPGMILPFET
60 70 80 90 100
DFLLGRKAMR SGEEIPVLIT APEERLGAAV TAMNSIYRNS KANVVFNIVT
110 120 130 140 150
LNESVVHLST WLSKTDLKHK IIVFDPSILL GKIPTDAQKM ETVRPLTFAR
160 170 180 190 200
FYMPAFLPDA EKAIYLDDDV IVQGDIRELF NTSLKSGHVA AFSEDCDSAS
210 220 230 240 250
SKGIVRGAGN QNSYIGYLDF KKEAIKKLGM RANTCSFNPG VFVANLTEWK
260 270 280 290 300
QQNVTSQLEF WMERNAKEDL YSKTLADCMT TPPMLIVFYK HHSNIDPMWN
310 320 330 340 350
VRHLGATGAG NRYSAQFVKA AKLLHWNGHY KPWGRTSSFS DIWDKWYIPD
360
PTGKFHPIRK HVEEK
Length:365
Mass (Da):41,353
Last modified:December 7, 2004 - v1
Checksum:i0830DA1692F23E13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC085543 mRNA. Translation: AAH85543.1.
RefSeqiNP_001007339.1. NM_001007338.1.
UniGeneiDr.79325.

Genome annotation databases

GeneIDi492466.
KEGGidre:492466.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC085543 mRNA. Translation: AAH85543.1.
RefSeqiNP_001007339.1. NM_001007338.1.
UniGeneiDr.79325.

3D structure databases

ProteinModelPortaliQ5U3H3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000058734.

Protein family/group databases

CAZyiGT8. Glycosyltransferase Family 8.

Proteomic databases

PRIDEiQ5U3H3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi492466.
KEGGidre:492466.

Organism-specific databases

CTDi55830.
ZFINiZDB-GENE-041114-23. glt8d1.

Phylogenomic databases

eggNOGiNOG74598.
HOGENOMiHOG000112730.
HOVERGENiHBG055240.
InParanoidiQ5U3H3.
PhylomeDBiQ5U3H3.

Miscellaneous databases

NextBioi20865026.
PROiQ5U3H3.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR002495. Glyco_trans_8.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF01501. Glyco_transf_8. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Ovary.

Entry informationi

Entry nameiGL8D1_DANRE
AccessioniPrimary (citable) accession number: Q5U3H3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: December 7, 2004
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.