Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Nei endonuclease VIII-like 3 (E. coli)

Gene

neil3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionEndonucleaseImported, Hydrolase, Nuclease
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Nei endonuclease VIII-like 3 (E. coli)Imported
Submitted name:
Neil3 proteinImported
Gene namesi
Name:neil3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-041114-18 neil3

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 115FPG_CATInterPro annotationAdd BLAST114
Domaini225 – 259FPG-typeInterPro annotationAdd BLAST35
Domaini295 – 324RanBP2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000113754
HOVERGENiHBG052594
KOiK10569

Family and domain databases

Gene3Di3.20.190.101 hit
InterProiView protein in InterPro
IPR015886 DNA_glyclase/AP_lyase_DNA-bd
IPR015887 DNA_glyclase_Znf_dom_DNA_BS
IPR012319 FPG_cat
IPR035937 MutM-like_N-ter
IPR010979 Ribosomal_S13-like_H2TH
IPR000214 Znf_DNA_glyclase/AP_lyase
IPR010666 Znf_GRF
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf
PfamiView protein in Pfam
PF06831 H2TH, 1 hit
PF06839 zf-GRF, 2 hits
PF00641 zf-RanBP, 1 hit
SMARTiView protein in SMART
SM00898 Fapy_DNA_glyco, 1 hit
SM01232 H2TH, 1 hit
SM00547 ZnF_RBZ, 1 hit
SUPFAMiSSF46946 SSF46946, 1 hit
SSF81624 SSF81624, 1 hit
SSF90209 SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS51068 FPG_CAT, 1 hit
PS01242 ZF_FPG_1, 1 hit
PS51066 ZF_FPG_2, 1 hit
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q5U3G8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEGPGCTLN GEKIRARVQK RQKVLHIQGN ETKTTSDDGS RSSFQSFTGG
60 70 80 90 100
EFTGVETLGK ELFMYFGVRA LRLHFGMNGS MRINPLKKDL HGKPPVLVIQ
110 120 130 140 150
LTNDAICFFD TTVEIRLSED CEQKVRAMEA LDICSPKFSF SRAVEAVKTE
160 170 180 190 200
RARMLCDVLL DQTVLPGVGN IIKNEALFDS GLNPAVKVSQ LTDEQVHHLV
210 220 230 240 250
KMTRDFTLLF YKCRKNGSPL YKHYKVYKRP NCGQCSGTVT VCRLGDNGRM
260 270 280 290 300
TYYCQRCQTG DPSEVNISKL LTRNSLIGWV YQGGMSSSEH VAKQEEEEWA
310 320 330 340 350
CSLCTLINRP FNKHCDACMS PRPDEPQKLE HSPLSPDLIR YPCNSFSKPL
360 370 380 390 400
QEIKMNRRAA FGTTTLVLTS LSAKPDSPSS PAISQAHTPE TMRGLSTHGN
410 420 430 440 450
WQRKSPCNGV SGMQFKGNEP CKRESPTDHS QPNKRMKTTN GTFSGGNIKH
460 470 480 490 500
ISSSHHRPCT QRVVTKEGEN KGRQFYTCSL PRETQCNFFE WADLHFPMCH
510 520 530 540 550
HGKRTVMKTV LKLGPNNGRN FYTCPVKMGK QCNFFQWAEN GPGISILPGC
Length:550
Mass (Da):61,684
Last modified:December 7, 2004 - v1
Checksum:i92663E81FAF35D9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC085550 mRNA Translation: AAH85550.1
BC164271 mRNA Translation: AAI64271.1
RefSeqiNP_001007336.1, NM_001007335.1
UniGeneiDr.28324

Genome annotation databases

GeneIDi492463
KEGGidre:492463

Similar proteinsi

Entry informationi

Entry nameiQ5U3G8_DANRE
AccessioniPrimary (citable) accession number: Q5U3G8
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: April 25, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)