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Q5U3G8 (Q5U3G8_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Neil3 protein EMBL AAI64271.1
Gene names
Name:neil3 EMBL AAH85550.1 ZFIN ZDB-GENE-041114-18
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH85550.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length550 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q5U3G8 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 92663E81FAF35D9B

FASTA55061,684
        10         20         30         40         50         60 
MVEGPGCTLN GEKIRARVQK RQKVLHIQGN ETKTTSDDGS RSSFQSFTGG EFTGVETLGK 

        70         80         90        100        110        120 
ELFMYFGVRA LRLHFGMNGS MRINPLKKDL HGKPPVLVIQ LTNDAICFFD TTVEIRLSED 

       130        140        150        160        170        180 
CEQKVRAMEA LDICSPKFSF SRAVEAVKTE RARMLCDVLL DQTVLPGVGN IIKNEALFDS 

       190        200        210        220        230        240 
GLNPAVKVSQ LTDEQVHHLV KMTRDFTLLF YKCRKNGSPL YKHYKVYKRP NCGQCSGTVT 

       250        260        270        280        290        300 
VCRLGDNGRM TYYCQRCQTG DPSEVNISKL LTRNSLIGWV YQGGMSSSEH VAKQEEEEWA 

       310        320        330        340        350        360 
CSLCTLINRP FNKHCDACMS PRPDEPQKLE HSPLSPDLIR YPCNSFSKPL QEIKMNRRAA 

       370        380        390        400        410        420 
FGTTTLVLTS LSAKPDSPSS PAISQAHTPE TMRGLSTHGN WQRKSPCNGV SGMQFKGNEP 

       430        440        450        460        470        480 
CKRESPTDHS QPNKRMKTTN GTFSGGNIKH ISSSHHRPCT QRVVTKEGEN KGRQFYTCSL 

       490        500        510        520        530        540 
PRETQCNFFE WADLHFPMCH HGKRTVMKTV LKLGPNNGRN FYTCPVKMGK QCNFFQWAEN 

       550 
GPGISILPGC 

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary EMBL AAH85550.1.
[2]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: PCR rescue EMBL AAI64271.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC085550 mRNA. Translation: AAH85550.1.
BC164271 mRNA. Translation: AAI64271.1.
RefSeqNP_001007336.1. NM_001007335.1.
UniGeneDr.28324.

3D structure databases

ProteinModelPortalQ5U3G8.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ5U3G8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID492463.
KEGGdre:492463.

Organism-specific databases

CTD55247.
ZFINZDB-GENE-041114-18. neil3.

Phylogenomic databases

HOGENOMHOG000113754.
HOVERGENHBG052594.
InParanoidQ5U3G8.
KOK10569.

Gene expression databases

BgeeQ5U3G8.

Family and domain databases

InterProIPR015886. DNA_glyclase/AP_lyase_DNA-bd.
IPR015887. DNA_glyclase_Znf_dom_DNA_BS.
IPR012319. DNA_glycosylase/AP_lyase_cat.
IPR010979. Ribosomal_S13-like_H2TH.
IPR000214. Znf_DNA_glyclase/AP_lyase.
IPR010666. Znf_GRF.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamPF01149. Fapy_DNA_glyco. 1 hit.
PF06831. H2TH. 1 hit.
PF06839. zf-GRF. 2 hits.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTSM00898. Fapy_DNA_glyco. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMSSF46946. SSF46946. 1 hit.
SSF81624. SSF81624. 1 hit.
PROSITEPS51068. FPG_CAT. 1 hit.
PS01242. ZF_FPG_1. 1 hit.
PS51066. ZF_FPG_2. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20865025.

Entry information

Entry nameQ5U3G8_DANRE
AccessionPrimary (citable) accession number: Q5U3G8
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: April 16, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)