Q5U3G5 (Q5U3G5_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chromobox homolog 2 (Drosophila Pc class) EMBL AAH85553.1

Gene names

Name:

cbx2 ZFIN ZDB-GENE-030131-5502

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH85553.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	510 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU003301 SAAS SAAS000953
Gene Ontology (GO)
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5U3G5 [UniParc]. Last modified December 7, 2004. Version 1. Checksum: 2A9BCA056417052B	FASTA	510	55,415
	10 20 30 40 50 60 MEGLSAVGEQ VFDAECILNK RTRKGKLEYL VKWRGWSSKH NSWEPQENLL DPRLLVAFNK 70 80 90 100 110 120 REQEKELLIS KKGKRPRGRP RKIMETIPVV SKSSSSSSSS SSSGSSSSSS SSSSSTDDDD 130 140 150 160 170 180 EDDHNMTPKP IPRPREHLPV PQKKAQIVVA KPGPPKKRGR KALPPELKAI RQVKGTRKIL 190 200 210 220 230 240 KPISRDSDLR GIKKPLMPAS FTYTGLNRTS GREPMAMHNR GSFTHKSSLS SLGRSIGSVS 250 260 270 280 290 300 SPPTLNRSPQ TKSASDFKLS VSDMNSGLDP KTPTCKSPGV AALNLHSSNG QTCPQLSPTV 310 320 330 340 350 360 PKDQTLLQRS ASLPKSPSSS FSSLKTPSSL QALNLQSVNK TVQGNGTDLK TSPHSGRKSS 370 380 390 400 410 420 GFNTSSAPNT PSKFQTSQQA LKSPQKLKAD DLAERLGKKS QARTEKILPT EGRDSQPAQD 430 440 450 460 470 480 RPSSKDPSKQ SKTLSELSTG EEGSSSDTDH DSSFPRDSHD LSISVQAGQD WRPTRSLIEH 490 500 510 VFVTDVTANL VTVTVKESPT SVGFFSIRNY

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary EMBL AAH85553.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC085553 mRNA. Translation: AAH85553.1.
IPI	IPI00507858.
UniGene	Dr.78712.
3D structure databases
ProteinModelPortal	Q5U3G5.
SMR	Q5U3G5. Positions 8-67.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5U3G5.
Proteomic databases
PRIDE	Q5U3G5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-030131-5502. cbx2.
Phylogenomic databases
eggNOG	fiNOG15638.
HOGENOM	HBG715334.
HOVERGEN	HBG005256.
InParanoid	Q5U3G5.
OrthoDB	EOG4Q84ZX.
Gene expression databases
ArrayExpress	Q5U3G5.
Bgee	Q5U3G5.
Family and domain databases
InterPro	IPR017956. AT_hook_DNA-bd_motif. IPR023780. Chromo_domain. IPR000953. Chromo_domain/shadow. IPR016197. Chromodomain-like. IPR023779. Chromodomain_CS. [Graphical view]
Pfam	PF00385. Chromo. 1 hit. [Graphical view]
SMART	SM00384. AT_hook. 1 hit. SM00298. CHROMO. 1 hit. [Graphical view]
SUPFAM	SSF54160. Chromodomain-like. 1 hit.
PROSITE	PS00598. CHROMO_1. 1 hit. PS50013. CHROMO_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5U3G5_DANRE

Accession

Primary (citable) accession number: Q5U3G5

Entry history

Integrated into UniProtKB/TrEMBL:	December 7, 2004
Last sequence update:	December 7, 2004
Last modified:	October 19, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)