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Protein
Submitted name:

Catenin (Cadherin associated protein), alpha 1

Gene

Ctnna1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-375170 CDO in myogenesis
R-RNO-418990 Adherens junctions interactions
R-RNO-5218920 VEGFR2 mediated vascular permeability
R-RNO-5626467 RHO GTPases activate IQGAPs

Names & Taxonomyi

Protein namesi
Submitted name:
Catenin (Cadherin associated protein), alpha 1Imported
Submitted name:
Catenin (Cadherin-associated protein), alpha 1, isoform CRA_bImported
Submitted name:
Catenin alpha 1Imported
Gene namesi
Name:Ctnna1Imported
Synonyms:Catna1Imported
ORF Names:rCG_49560Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 18

Organism-specific databases

RGDi1359485 Ctnna1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000005796

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ5U302, 2 interactors
STRINGi10116.ENSRNOP00000008041

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili683 – 703Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3681 Eukaryota
ENOG410XSRU LUCA
GeneTreeiENSGT00550000074411
HOGENOMiHOG000280724
HOVERGENiHBG000069
KOiK05691
OMAiVLQRNIP
OrthoDBiEOG091G01KR
TreeFamiTF313686

Family and domain databases

InterProiView protein in InterPro
IPR036723 Alpha-catenin/vinculin-like_sf
IPR001033 Alpha_catenin
IPR030047 CTNNA1
IPR006077 Vinculin/catenin
IPR000633 Vinculin_CS
PANTHERiPTHR18914 PTHR18914, 1 hit
PTHR18914:SF24 PTHR18914:SF24, 1 hit
PfamiView protein in Pfam
PF01044 Vinculin, 2 hits
PRINTSiPR00805 ALPHACATENIN
SUPFAMiSSF47220 SSF47220, 4 hits
PROSITEiView protein in PROSITE
PS00663 VINCULIN_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q5U302-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAVHTGNIN FKWDPKSLEI RTLAVERLLE PLVTQVTTLV NTNSKGPSNK
60 70 80 90 100
KRGRSKKAHV LAASVEQATE NFLEKGDKIA KESQFLKEEL VAAVDDVRKQ
110 120 130 140 150
GDLMKSAAGE FADDPCSSVK RGNMVRAARA LLSAVTRLLI LADMADVYKL
160 170 180 190 200
LVQLKVVEDG ILKLRNAGNE QDLGIQYRAL KPEVDKLNIM AAKRQQELKD
210 220 230 240 250
VGHRDQMAAA RGILQKNVPI LYTASQACLQ HPDVAAYKAN RDLIYKQLQQ
260 270 280 290 300
AVTGISNAAQ ATASDDASQQ QGGGGGGGEL AYALNNFDKQ IIVDPLSFSE
310 320 330 340 350
ERFRPSLEER LESIISGAAL MADSSCTRDD RRERIVAECN AVRQALQDLL
360 370 380 390 400
SEYMGNAGRK ERSDALNSAI DKMTKKTRDL RRQLRKAVMD HVSDSFLETN
410 420 430 440 450
VPLLVLIEAA KNGNEKEVKE YAQVFREHAN KLIEVANLAC SISNNEEGVK
460 470 480 490 500
LVRMSASQLE ALCPQVINAA LALAAKPQSK LAQENMDLFK EQWEKQVRVL
510 520 530 540 550
TDAVDDITSI DDFLAVSENH ILEDVNKCVI ALQEKDVDGL DRTAGAIRGR
560 570 580 590 600
AARVIHVVTS EMDNYEPGVY TEKVLEATKL LSNTVMPRFT EQVEAAVEAL
610 620 630 640 650
SSDPAQPMDE NEFIDASRLV YDGIRDIRKA VLMIRTPEEL DDSDFETEDF
660 670 680 690 700
DVRSRTSVQT EDDQLIAGQS ARAIMAQLPQ EQKAKIAEQV ASFQEEKSKL
710 720 730 740 750
DAEVSKWDDS GNDIIVLAKQ MCMIMMEMTD FTRGKGPLKN TSDVISAAKK
760 770 780 790 800
IAEAGSRMDK LGRTIADHCP DSACKQDLLA YLQRIALYCH QLNICSKVKA
810 820 830 840 850
EVQNLGGELV VSGVDSAMSL IQAAKNLMNA VVQTVKASYV ASTKYQKSQG
860 870 880 890 900
MASLNLPAVS WKMKAPEKKP LVKREKQDET QTKIKRASQK KHVNPVQALS

EFKAMDSI
Length:908
Mass (Da):100,236
Last modified:December 7, 2004 - v1
Checksum:i247F212CF5C620C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072580 Genomic DNA No translation available.
AC126530 Genomic DNA No translation available.
BC085789 mRNA Translation: AAH85789.1
CH473974 Genomic DNA Translation: EDL76253.1
RefSeqiNP_001007146.1, NM_001007145.1
XP_017456453.1, XM_017600964.1
UniGeneiRn.103790

Genome annotation databases

EnsembliENSRNOT00000008041; ENSRNOP00000008041; ENSRNOG00000005796
GeneIDi307505
KEGGirno:307505
UCSCiRGD:1359485 rat

Similar proteinsi

Entry informationi

Entry nameiQ5U302_RAT
AccessioniPrimary (citable) accession number: Q5U302
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: May 23, 2018
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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