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Protein
Submitted name:

GATA-binding protein 5

Gene

Gata5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-983231 Factors involved in megakaryocyte development and platelet production

Names & Taxonomyi

Protein namesi
Submitted name:
GATA-binding protein 5Imported
Submitted name:
Similar to Transcription factor GATA-5 (GATA binding factor-5)Imported
Gene namesi
Name:Gata5Imported
Synonyms:LOC499951Imported
ORF Names:rCG_38545Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1561365 Gata5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000058983

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007896

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini190 – 244GATA-typeInterPro annotationAdd BLAST55
Domaini244 – 297GATA-typeInterPro annotationAdd BLAST54

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1601 Eukaryota
COG5641 LUCA
GeneTreeiENSGT00760000119221
HOGENOMiHOG000047700
HOVERGENiHBG051703
KOiK17896
OMAiAFPFAHS
OrthoDBiEOG091G0AUR
TreeFamiTF315391

Family and domain databases

Gene3Di3.30.50.10, 2 hits
InterProiView protein in InterPro
IPR008013 GATA_N
IPR016375 TF_GATA_4/5/6
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00320 GATA, 2 hits
PF05349 GATA-N, 1 hit
PIRSFiPIRSF003028 TF_GATA_4/5/6, 1 hit
PRINTSiPR00619 GATAZNFINGER
SMARTiView protein in SMART
SM00401 ZnF_GATA, 2 hits
PROSITEiView protein in PROSITE
PS00344 GATA_ZN_FINGER_1, 2 hits
PS50114 GATA_ZN_FINGER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q5U2V0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYQSLALAQS PGQGTYADSG PFLHSSGAGS PVFVAPTRVP SMLPYLPSCE
60 70 80 90 100
PGSQPPALAA HSSWTQAVSA ESSAFGSGSP HPPATHPPGA TAFPFAHSPS
110 120 130 140 150
GSGSGGSAGV RDGAAFQSAL LAREQYPTAL GRPMSASYPT TYPAYVSPDV
160 170 180 190 200
APSWTSGPFD SSILHGLQGR PGGLPGRRTT FVPDFLEEFP GEGRECVNCG
210 220 230 240 250
ALSTPLWRRD GTGHYLCNAC GLYHKMNGVN RPLVRPQKRL SSSRRSGLCC
260 270 280 290 300
SNCHTATTTL WRRNAEGEPV CNACGLYMKL HGVPRPLAMK KESIQTRKRK
310 320 330 340 350
PKNPAKIKGS SGSTANSTAS SPTLLNTESS ATTLKAESSL ASPGCAGPTI
360 370 380 390 400
TSQASSPADE SLASSHLEFK FEPEDFVFTS SSLSPQAGLS GVLRQEAWCA

LALA
Length:404
Mass (Da):42,098
Last modified:December 7, 2004 - v1
Checksum:i3E235B571A59D8BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC115322 Genomic DNA No translation available.
BC085855 mRNA Translation: AAH85855.1
CH474066 Genomic DNA Translation: EDL88812.1
RefSeqiNP_001019487.1, NM_001024316.1
UniGeneiRn.27175

Genome annotation databases

EnsembliENSRNOT00000089971; ENSRNOP00000073661; ENSRNOG00000058983
GeneIDi499951
KEGGirno:499951

Similar proteinsi

Entry informationi

Entry nameiQ5U2V0_RAT
AccessioniPrimary (citable) accession number: Q5U2V0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: May 23, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health