Q5U0N0 (Q5U0N0_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) EMBL AAV38240.1

Submitted name:
Sarcoglycan, beta (43kDa dystrophin-associated glycoprotein), isoform CRA_a EMBL EAX05429.1
Submitted name:
cDNA FLJ75413, highly similar to Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA EMBL BAF82581.1

Gene names

Name:	SGCB EMBL EAX05429.1
ORF Names:	hCG_20638 EMBL EAX05429.1

Organism

Homo sapiens (Human) EMBL AAV38240.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	318 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	cardiocyte differentiation Inferred from electronic annotation. Source: Compara cytoskeleton organization Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro sarcoglycan complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5U0N0 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: DAC5E93D1AB6C80C	FASTA	318	34,777
	10 20 30 40 50 60 MAAAAAAAAE QQSSNGPVKK SMREKAVERR SVNKEHNSNF KAGYIPIDED RLHKTGLRGR 70 80 90 100 110 120 KGNLAICVII LLFILAVINL IITLVIWAVI RIGPNGCDSM EFHESGLLRF KQVSDMGVIH 130 140 150 160 170 180 PLYKSTVGGR RNENLVITGN NQPIVFQQGT TKLSVENNKT SITSDIGMQF FDPRTQNILF 190 200 210 220 230 240 STDYETHEFH LPSGVKSLNV QKASTERITS NATSDLNIKV DGRAIVRGNE GVFIMGKTIE 250 260 270 280 290 300 FHMGGNMELK AENSIILNGS VMVSTTRLPS SSSGDQLGSG DWVRYKLCMC ADGTLFKVQV 310 TSQNMGCQIS DNPCGNTH

References

[1]	"Cloning of human full-length CDSs in BD Creator(TM) System Donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"NEDO human cDNA sequencing project." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Corpus callosum EMBL BAF82581.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT019433 mRNA. Translation: AAV38240.1. AK289892 mRNA. Translation: BAF82581.1. CH471057 Genomic DNA. Translation: EAX05429.1.
IPI	IPI00002970.
RefSeq	NP_000223.1. NM_000232.4.
UniGene	Hs.438953.
3D structure databases
ProteinModelPortal	Q5U0N0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5U0N0.
Proteomic databases
PRIDE	Q5U0N0.
Protocols and materials databases
DNASU	6443.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6443.
KEGG	hsa:6443.
Organism-specific databases
CTD	6443.
PharmGKB	PA35717.
Phylogenomic databases
HOVERGEN	HBG004508.
KO	K12566.
OMA	NMGCQTS.
PhylomeDB	Q5U0N0.
Gene expression databases
ArrayExpress	Q5U0N0.
Bgee	Q5U0N0.
Family and domain databases
InterPro	IPR006875. Sarcoglycan. [Graphical view]
Pfam	PF04790. Sarcoglycan_1. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	SGCB. human.
GenomeRNAi	6443.
NextBio	25039.

Entry information

Entry name

Q5U0N0_HUMAN

Accession

Primary (citable) accession number: Q5U0N0

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	April 3, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.