Q5U0D2 (Q5U0D2_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein DKFZp686P11128 EMBL CAH18406.1

Submitted name:
TAGLN protein EMBL AAH92415.1
Submitted name:
Transgelin EMBL AAV38455.1
Submitted name:
Transgelin variant 2 EMBL ACA06080.1
Submitted name:
Transgelin, isoform CRA_b EMBL EAW67299.1
Submitted name:
cDNA, FLJ94704, highly similar to Homo sapiens transgelin (TAGLN), mRNA EMBL BAG36752.1

Gene names

Name:	TAGLN EMBL AAH92415.1
Synonyms:	DKFZp686P11128 EMBL CAH18406.1
ORF Names:	hCG_2032895 EMBL EAW67299.1

Organism

Homo sapiens (Human) EMBL AAV38455.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	201 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	muscle organ development Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	201	1	EMBL CAG46482.1

Sequences

	Sequence		Length	Mass (Da)
	Q5U0D2 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 7AE9E7A9A45602C3	FASTA	201	22,611
	10 20 30 40 50 60 MANKGPSYGM SREVQSKIEK KYDEELEERL VEWIIVQCGP DVGRPDRGRL GFQVWLKNGV 70 80 90 100 110 120 ILSKLVNSLY PDGSKPVKVP ENPPSMVFKQ MEQVAQFLKA AEDYGVIKTD MFQTVDLFEG 130 140 150 160 170 180 KDMAAVQRTL MALGSLAVTK NDGHYRGDPN WFMKKAQEHK REFTESQLQE GKHVIGLQMG 190 200 SNRGASQAGM TGYGRPRQII S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: White Matter pool- 5 brain tissues- femoral artery EMBL AAH92415.1.
[2]	"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Halleck A., Ebert L., Mkoundinya M., Schick M., Eisenstein S., Neubert P., Kstrang K., Schatten R., Shen B., Henze S., Mar W., Korn B., Zuo D., Hu Y., LaBaer J. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	The German cDNA Consortium Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S. Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Uterus EMBL CAH18406.1.
[4]	"Cloning of human full-length CDSs in BD Creator(TM) System Donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	Stockwell T.B., Busam D.A., Ferriera S.M., Brownley A.N., Strausberg R.L., Kirkness E.F., Rogers Y.-H., Levy S. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	"NEDO functional analysis of protein and research application project." Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Uterus EMBL BAG36752.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC092415 mRNA. Translation: AAH92415.1. BC093050 mRNA. Translation: AAH93050.1. BT019648 mRNA. Translation: AAV38454.1. BT019649 mRNA. Translation: AAV38455.1. EF445034 Genomic DNA. Translation: ACA06080.1. AK314043 mRNA. Translation: BAG36752.1. CR541681 mRNA. Translation: CAG46482.1. CR749612 mRNA. Translation: CAH18406.1. CH471065 Genomic DNA. Translation: EAW67299.1.
IPI	IPI00216138.
RefSeq	NP_001001522.1. NM_001001522.1. NP_003177.2. NM_003186.3.
UniGene	Hs.410977. Hs.666842.
3D structure databases
ProteinModelPortal	Q5U0D2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5U0D2.
Proteomic databases
PRIDE	Q5U0D2.
Protocols and materials databases
DNASU	6876.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6876.
KEGG	hsa:6876.
Organism-specific databases
CTD	6876.
PharmGKB	PA36324.
Phylogenomic databases
HOVERGEN	HBG005186.
OMA	VEWIVVQ.
PhylomeDB	Q5U0D2.
Gene expression databases
ArrayExpress	Q5U0D2.
Bgee	Q5U0D2.
Family and domain databases
Gene3D	1.10.418.10. 1 hit.
InterPro	IPR000557. Calponin_repeat. IPR001715. CH-domain. IPR003096. SM22_calponin. IPR001061. TAGLN. [Graphical view]
PANTHER	PTHR18959:SF5. PTHR18959:SF5. 1 hit.
Pfam	PF00402. Calponin. 1 hit. PF00307. CH. 1 hit. [Graphical view]
PRINTS	PR00888. SM22CALPONIN.
SMART	SM00033. CH. 1 hit. [Graphical view]
SUPFAM	SSF47576. Calponin-homology. 1 hit.
PROSITE	PS01052. CALPONIN_1. 1 hit. PS51122. CALPONIN_2. 1 hit. PS50021. CH. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	TAGLN. human.
GenomeRNAi	6876.
NextBio	26849.

Entry information

Entry name

Q5U0D2_HUMAN

Accession

Primary (citable) accession number: Q5U0D2

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	May 1, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.