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Q5TZ05 (Q5TZ05_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Si:dkey-221h15.1 Ensembl ENSDARP00000047361
Gene names
Name:si:dkey-221h15.1 Ensembl ENSDARP00000047361 ZFIN ZDB-GENE-041014-344
ORF Names:DKEY-166K9.1-001 EMBL CAH68999.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL CAH68999.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length235 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q5TZ05 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 6B18BF8946BBC199

FASTA23526,625
        10         20         30         40         50         60 
MVARTSVRLI WRQFIQSRMG EMSSKVQMIS PEEALPGREQ SIKVSAKHDV NGNRTVPPFP 

        70         80         90        100        110        120 
EGLQMVLFGM GCFWGAERKF WRQKGVYSTQ VGYSGGYTPN PTYEEVCTGK TGHTEVVRVV 

       130        140        150        160        170        180 
FEPQKIKFSE LLKVFWESHN PTQGMRQGND VGTTYRSSIY TNTQEQLEQA LQSREEYQKV 

       190        200        210        220        230 
LTEEGFGAIT TEITMAKEFY YAEDYHQQYL SKNPDGYCGL GGTGVSCPIG LKSKH 

« Hide

References

« Hide 'large scale' references
[1]Smith M.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Dyer L.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"The genomic sequence of Danio rerio."
The Danio rerio Sequencing Project at the Sanger Institute
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000047361.
[4]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000047361.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX569784, BX511178 Genomic DNA. Translation: CAH68999.1.
BX511178, BX569784 Genomic DNA. Translation: CAI20959.1.
IPIIPI00496817.
RefSeqNP_001076362.1. NM_001082893.2.
UniGeneDr.83707.

3D structure databases

ProteinModelPortalQ5TZ05.
SMRQ5TZ05. Positions 28-228.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5TZ05.

Proteomic databases

PRIDEQ5TZ05.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000047362; ENSDARP00000047361; ENSDARG00000029587.
GeneID793910.
KEGGdre:793910.

Organism-specific databases

ZFINZDB-GENE-041014-344. si:dkey-221h15.1.

Phylogenomic databases

eggNOGfiNOG10349.
GeneTreeENSGT00390000003823.
HOGENOMHBG748152.
HOVERGENHBG006401.
InParanoidQ5TZ05.
OMASAIYCTT.
OrthoDBEOG4H19WS.
PhylomeDBQ5TZ05.

Gene expression databases

ArrayExpressQ5TZ05.
BgeeQ5TZ05.

Family and domain databases

HAMAPMF_01401. MsrA.
[Tree]
InterProIPR002569. Peptide_Met_Sox_Rdtase_MsrA.
[Graphical view]
Gene3DG3DSA:3.30.1060.10. MsrA. 1 hit.
KOK07304.
PfamPF01625. PMSR. 1 hit.
[Graphical view]
SUPFAMSSF55068. MsrA. 1 hit.
TIGRFAMsTIGR00401. MsrA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5TZ05_DANRE
AccessionPrimary (citable) accession number: Q5TZ05
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: January 25, 2012
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)