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Protein
Submitted name:

General transcription factor IIA, 1

Gene

gtf2a1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-674695 RNA Polymerase II Pre-transcription Events
R-DRE-6807505 RNA polymerase II transcribes snRNA genes
R-DRE-73776 RNA Polymerase II Promoter Escape
R-DRE-73779 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
R-DRE-75953 RNA Polymerase II Transcription Initiation
R-DRE-76042 RNA Polymerase II Transcription Initiation And Promoter Clearance
R-DRE-9018519 Estrogen-dependent gene expression

Names & Taxonomyi

Protein namesi
Submitted name:
General transcription factor IIA, 1Imported
Gene namesi
Name:gtf2a1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 20

Organism-specific databases

ZFINiZDB-GENE-030131-2694 gtf2a1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiQ5TYT6

Expressioni

Gene expression databases

BgeeiENSDARG00000011000
ExpressionAtlasiQ5TYT6 baseline

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000015974

Structurei

3D structure databases

ProteinModelPortaliQ5TYT6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2652 Eukaryota
ENOG4111M8K LUCA
GeneTreeiENSGT00900000141061
HOGENOMiHOG000015236
HOVERGENiHBG052771
InParanoidiQ5TYT6
OMAiMLCTYDK
TreeFamiTF350445

Family and domain databases

CDDicd07976 TFIIA_alpha_beta_like, 2 hits
Gene3Di2.30.18.10, 1 hit
InterProiView protein in InterPro
IPR004855 TFIIA_asu/bsu
IPR009088 TFIIA_b-brl
PfamiView protein in Pfam
PF03153 TFIIA, 2 hits
SMARTiView protein in SMART
SM01371 TFIIA, 1 hit
SUPFAMiSSF50784 SSF50784, 1 hit

Sequencei

Sequence statusi: Complete.

Q5TYT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSANSNQV PKLYRSVMED VIAEVRELFL DEGVDEQVLM ELKTLWESKL
60 70 80 90 100
MQSKAVDGFH TEEQQVLHAQ QQQAQAQQTQ PQTQPQQVLL PPAQTTPQQQ
110 120 130 140 150
VIVQDAKIMQ HMSATGMSAA ATAATLALPT GVAPFQQLIT PQGQILQVVR
160 170 180 190 200
AANGAQYIIQ PQQQMLLQQQ VLPQMQPGGV QAPVIQQVLT PLQGGLPQQT
210 220 230 240 250
GVIIQPQQIV LTGNKVPQNT QVMQAAAMAV QSGPGDAQVQ TQPQAQQQQQ
260 270 280 290 300
QQQQQASQQP PMMLQVDGAG DTSSEEDEEE EDEYDEDEDE DKEKDGGEDG
310 320 330 340 350
QVEEEPLNSG DDVSDEEDQE LFDTENVVVC QYDKIHRSKN KWKFHLKDGI
360
MNLNGRDFVF SKAIGDAEW
Length:369
Mass (Da):40,785
Last modified:December 7, 2004 - v1
Checksum:iAE42C437C1101CAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX890568 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSDART00000006443; ENSDARP00000015974; ENSDARG00000011000

Similar proteinsi

Entry informationi

Entry nameiQ5TYT6_DANRE
AccessioniPrimary (citable) accession number: Q5TYT6
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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