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Q5TKP3

- Q5TKP3_ORYSJ

UniProt

Q5TKP3 - Q5TKP3_ORYSJ

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Protein
Submitted name:

Putative 60S ribosomal L28 protein

Gene
OJ1362_G11.15
Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative 60S ribosomal L28 proteinImported
Gene namesi
Name:OJ1362_G11.15Imported
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ5TKP3.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ5TKP3.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J61electron microscopy5.50r1-147[»]

Family & Domainsi

Phylogenomic databases

OMAiESKGPRA.

Family and domain databases

InterProiIPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view]
PANTHERiPTHR10544. PTHR10544. 1 hit.
PfamiPF01778. Ribosomal_L28e. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5TKP3-1 [UniParc]FASTAAdd to Basket

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MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG    50
LANKKTVTIQ PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK 100
AVKNQVSDNY YRPDLTKPAL ARLSSVYRSL QVSKSGAKKK NRQPTKL 147
Length:147
Mass (Da):16,606
Last modified:December 21, 2004 - v1
Checksum:i3092AB54910D925B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3J61 electron microscopy 5.50 r 1-147 [» ]
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5TKP3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

Gramenei Q5TKP3.

Phylogenomic databases

OMAi ESKGPRA.

Family and domain databases

InterProi IPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view ]
PANTHERi PTHR10544. PTHR10544. 1 hit.
Pfami PF01778. Ribosomal_L28e. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).

Entry informationi

Entry nameiQ5TKP3_ORYSJ
AccessioniPrimary (citable) accession number: Q5TKP3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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