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Protein
Submitted name:

Putative 60S ribosomal L28 protein

Gene

OJ1362_G11.15

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative 60S ribosomal L28 proteinImported
Gene namesi
Name:OJ1362_G11.15Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 5

Organism-specific databases

GrameneiQ5TKP3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ5TKP3.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g46430.1.

Family & Domainsi

Phylogenomic databases

InParanoidiQ5TKP3.
OMAiIIRNNSC.

Family and domain databases

InterProiIPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view]
PANTHERiPTHR10544. PTHR10544. 1 hit.
PfamiPF01778. Ribosomal_L28e. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5TKP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG
60 70 80 90 100
LANKKTVTIQ PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK
110 120 130 140
AVKNQVSDNY YRPDLTKPAL ARLSSVYRSL QVSKSGAKKK NRQPTKL
Length:147
Mass (Da):16,606
Last modified:December 21, 2004 - v1
Checksum:i3092AB54910D925B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os05g46430.1.

Proteomic databases

PRIDEiQ5TKP3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GrameneiQ5TKP3.

Phylogenomic databases

InParanoidiQ5TKP3.
OMAiIIRNNSC.

Family and domain databases

InterProiIPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view]
PANTHERiPTHR10544. PTHR10544. 1 hit.
PfamiPF01778. Ribosomal_L28e. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. NipponbareImported.

Entry informationi

Entry nameiQ5TKP3_ORYSJ
AccessioniPrimary (citable) accession number: Q5TKP3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: June 24, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.