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Q5TKP3

- Q5TKP3_ORYSJ

UniProt

Q5TKP3 - Q5TKP3_ORYSJ

Protein
Submitted name:

Putative 60S ribosomal L28 protein

Gene

OJ1362_G11.15

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative 60S ribosomal L28 proteinImported
    Gene namesi
    Name:OJ1362_G11.15Imported
    OrganismiOryza sativa subsp. japonica (Rice)Imported
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 5

    Organism-specific databases

    GrameneiQ5TKP3.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiQ5TKP3.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3J61electron microscopy5.50r1-147[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OMAiESKGPRA.

    Family and domain databases

    InterProiIPR029004. L28e/Mak16.
    IPR002672. Ribosomal_L28e.
    [Graphical view]
    PANTHERiPTHR10544. PTHR10544. 1 hit.
    PfamiPF01778. Ribosomal_L28e. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5TKP3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG    50
    LANKKTVTIQ PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK 100
    AVKNQVSDNY YRPDLTKPAL ARLSSVYRSL QVSKSGAKKK NRQPTKL 147
    Length:147
    Mass (Da):16,606
    Last modified:December 21, 2004 - v1
    Checksum:i3092AB54910D925B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC104713 Genomic DNA. Translation: AAV67824.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC104713 Genomic DNA. Translation: AAV67824.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3J61 electron microscopy 5.50 r 1-147 [» ]
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q5TKP3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei Q5TKP3.

    Phylogenomic databases

    OMAi ESKGPRA.

    Family and domain databases

    InterProi IPR029004. L28e/Mak16.
    IPR002672. Ribosomal_L28e.
    [Graphical view ]
    PANTHERi PTHR10544. PTHR10544. 1 hit.
    Pfami PF01778. Ribosomal_L28e. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NipponbareImported.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. NipponbareImported.
    3. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
      Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
      Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).

    Entry informationi

    Entry nameiQ5TKP3_ORYSJ
    AccessioniPrimary (citable) accession number: Q5TKP3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 21, 2004
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3