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Q5TKP3

- Q5TKP3_ORYSJ

UniProt

Q5TKP3 - Q5TKP3_ORYSJ

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Protein
Submitted name:

Putative 60S ribosomal L28 protein

Gene

OJ1362_G11.15

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative 60S ribosomal L28 proteinImported
Gene namesi
Name:OJ1362_G11.15Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ5TKP3.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ5TKP3.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J61electron microscopy5.50r1-147[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiQ5TKP3.
OMAiESKGPRA.

Family and domain databases

InterProiIPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view]
PANTHERiPTHR10544. PTHR10544. 1 hit.
PfamiPF01778. Ribosomal_L28e. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5TKP3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG
60 70 80 90 100
LANKKTVTIQ PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK
110 120 130 140
AVKNQVSDNY YRPDLTKPAL ARLSSVYRSL QVSKSGAKKK NRQPTKL
Length:147
Mass (Da):16,606
Last modified:December 21, 2004 - v1
Checksum:i3092AB54910D925B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC104713 Genomic DNA. Translation: AAV67824.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3J61 electron microscopy 5.50 r 1-147 [» ]
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5TKP3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

Gramenei Q5TKP3.

Phylogenomic databases

InParanoidi Q5TKP3.
OMAi ESKGPRA.

Family and domain databases

InterProi IPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view ]
PANTHERi PTHR10544. PTHR10544. 1 hit.
Pfami PF01778. Ribosomal_L28e. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. NipponbareImported.
  3. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).

Entry informationi

Entry nameiQ5TKP3_ORYSJ
AccessioniPrimary (citable) accession number: Q5TKP3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3