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Q5TKP3 (Q5TKP3_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:OJ1362_G11.15 EMBL AAV67824.1
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3J61
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5TKP3 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 3092AB54910D925B

FASTA14716,606
        10         20         30         40         50         60 
MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG LANKKTVTIQ 

        70         80         90        100        110        120 
PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK AVKNQVSDNY YRPDLTKPAL 

       130        140 
ARLSSVYRSL QVSKSGAKKK NRQPTKL 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC104713 Genomic DNA. Translation: AAV67824.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3J61electron microscopy5.50r1-147[»]
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ5TKP3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneQ5TKP3.

Phylogenomic databases

OMAESKGPRA.

Family and domain databases

InterProIPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
[Graphical view]
PANTHERPTHR10544. PTHR10544. 1 hit.
PfamPF01778. Ribosomal_L28e. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5TKP3_ORYSJ
AccessionPrimary (citable) accession number: Q5TKP3
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)