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Protein

Sterile alpha motif domain-containing protein 5

Gene

SAMD5

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Sterile alpha motif domain-containing protein 5
Short name:
SAM domain-containing protein 5
Gene namesi
Name:SAMD5
Synonyms:SAMDC1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000203727.3.
HGNCiHGNC:21180. SAMD5.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000203727.
PharmGKBiPA134888862.

Polymorphism and mutation databases

BioMutaiSAMD5.
DMDMi74746493.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003113611 – 173Sterile alpha motif domain-containing protein 5Add BLAST173

Proteomic databases

PaxDbiQ5TGI4.
PRIDEiQ5TGI4.

PTM databases

iPTMnetiQ5TGI4.
PhosphoSitePlusiQ5TGI4.

Expressioni

Gene expression databases

BgeeiENSG00000203727.
CleanExiHS_SAMD5.
ExpressionAtlasiQ5TGI4. baseline and differential.
GenevisibleiQ5TGI4. HS.

Organism-specific databases

HPAiHPA067811.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000356444.

Structurei

3D structure databases

ProteinModelPortaliQ5TGI4.
SMRiQ5TGI4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 65SAMPROSITE-ProRule annotationAdd BLAST65

Phylogenomic databases

eggNOGiENOG410INAV. Eukaryota.
ENOG4111JDA. LUCA.
GeneTreeiENSGT00510000048701.
HOGENOMiHOG000048262.
HOVERGENiHBG096715.
InParanoidiQ5TGI4.
OMAiTMASNIV.
OrthoDBiEOG091G0BS1.
PhylomeDBiQ5TGI4.
TreeFamiTF339222.

Family and domain databases

InterProiView protein in InterPro
IPR001660. SAM.
IPR013761. SAM/pointed_sf.
PfamiView protein in Pfam
PF00536. SAM_1. 1 hit.
SMARTiView protein in SMART
SM00454. SAM. 1 hit.
SUPFAMiSSF47769. SSF47769. 1 hit.
PROSITEiView protein in PROSITE
PS50105. SAM_DOMAIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5TGI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCTNIVYEWL KALQLPQYAE SFVDNGYDDL EVCKQIGDPD LDAIGVLAPA
60 70 80 90 100
HRRRILEAVR RLREQDANAA GLYFTLEPQP APPGPPADAV PTGRRGEPCG
110 120 130 140 150
GPAQGTRGDS RGHTTAPRSR ELVSYPKLKL KIMIRDKLVR DGIHLSKPPY
160 170
SRKVPMAGIL EYLMNWPKSS QSR
Length:173
Mass (Da):19,231
Last modified:December 21, 2004 - v1
Checksum:i6869A7A22FD73745
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL354880 Genomic DNA. No translation available.
AL034350 Genomic DNA. No translation available.
CCDSiCCDS34548.1.
RefSeqiNP_001025231.1. NM_001030060.2.
UniGeneiHs.567973.

Genome annotation databases

EnsembliENST00000367474; ENSP00000356444; ENSG00000203727.
GeneIDi389432.
KEGGihsa:389432.
UCSCiuc003qmc.3. human.

Similar proteinsi

Entry informationi

Entry nameiSAMD5_HUMAN
AccessioniPrimary (citable) accession number: Q5TGI4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: December 21, 2004
Last modified: November 22, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 6
    Human chromosome 6: entries, gene names and cross-references to MIM