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Q5TDE8

- Q5TDE8_HUMAN

UniProt

Q5TDE8 - Q5TDE8_HUMAN

Protein
Submitted name:

E3 ubiquitin-protein ligase RNF220

Gene

RNF220

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    E3 ubiquitin-protein ligase RNF220Imported
    Gene namesi
    Name:RNF220Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 1

    Organism-specific databases

    HGNCiHGNC:25552. RNF220.

    PTM / Processingi

    Proteomic databases

    PRIDEiQ5TDE8.

    Expressioni

    Gene expression databases

    ArrayExpressiQ5TDE8.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5TDE8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000231748.
    HOVERGENiHBG055526.

    Sequencei

    Sequence statusi: Fragment.

    Q5TDE8-1 [UniParc]FASTAAdd to Basket

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    MPRARSGRRS RGAGGREETF LRVRANRQTR LNARIGKMKR RKQDEGQVCP    50
    LCNRPLAGSE QEMSRHVEHC LSKREGSCMA EDDAVDIEHE NNNRFEEYEW 100
    CGQKRIRATT LLEGGFRGSG FIMCSGKENP DSDADLDVDG DDTLEYGKPQ 150
    YTEADVIPCT GEEPGEAKER EALRGAVLNG GPPSTRITPE FSKWASDEMP 200
    STSNGESSKQ EAMQKTCKNS DIEKITEDSA VTTFEALKAR VRELERQLSR 250
    GDRYKCLICM 260
    Length:260
    Mass (Da):29,191
    Last modified:February 5, 2008 - v1
    Checksum:i233085435CA38D90
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei260 – 2601Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL122004 Genomic DNA. No translation available.
    AL359373 Genomic DNA. No translation available.
    AL596225 Genomic DNA. No translation available.
    KF495935 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000335497; ENSP00000335580; ENSG00000187147.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL122004 Genomic DNA. No translation available.
    AL359373 Genomic DNA. No translation available.
    AL596225 Genomic DNA. No translation available.
    KF495935 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali Q5TDE8.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q5TDE8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000335497 ; ENSP00000335580 ; ENSG00000187147 .

    Organism-specific databases

    HGNCi HGNC:25552. RNF220.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000231748.
    HOVERGENi HBG055526.

    Miscellaneous databases

    ChiTaRSi RNF220. human.
    NextBioi 35539913.

    Gene expression databases

    ArrayExpressi Q5TDE8.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and biological annotation of human chromosome 1."
      Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
      , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., Langford C.F., Pandian R.D., Porter K.M., Prigmore E.
      Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    4. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiQ5TDE8_HUMAN
    AccessioniPrimary (citable) accession number: Q5TDE8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3