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Q5TDE8

- Q5TDE8_HUMAN

UniProt

Q5TDE8 - Q5TDE8_HUMAN

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Protein
Submitted name:

E3 ubiquitin-protein ligase RNF220

Gene

RNF220

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase RNF220Imported
Gene namesi
Name:RNF220Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:25552. RNF220.

PTM / Processingi

Proteomic databases

PRIDEiQ5TDE8.

Expressioni

Gene expression databases

ExpressionAtlasiQ5TDE8. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5TDE8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000016573.
HOGENOMiHOG000231748.
HOVERGENiHBG055526.

Sequencei

Sequence statusi: Fragment.

Q5TDE8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPRARSGRRS RGAGGREETF LRVRANRQTR LNARIGKMKR RKQDEGQVCP
60 70 80 90 100
LCNRPLAGSE QEMSRHVEHC LSKREGSCMA EDDAVDIEHE NNNRFEEYEW
110 120 130 140 150
CGQKRIRATT LLEGGFRGSG FIMCSGKENP DSDADLDVDG DDTLEYGKPQ
160 170 180 190 200
YTEADVIPCT GEEPGEAKER EALRGAVLNG GPPSTRITPE FSKWASDEMP
210 220 230 240 250
STSNGESSKQ EAMQKTCKNS DIEKITEDSA VTTFEALKAR VRELERQLSR
260
GDRYKCLICM
Length:260
Mass (Da):29,191
Last modified:February 5, 2008 - v1
Checksum:i233085435CA38D90
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei260 – 2601Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL122004 Genomic DNA. No translation available.
AL359373 Genomic DNA. No translation available.
AL596225 Genomic DNA. No translation available.
KF495935 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000335497; ENSP00000335580; ENSG00000187147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL122004 Genomic DNA. No translation available.
AL359373 Genomic DNA. No translation available.
AL596225 Genomic DNA. No translation available.
KF495935 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali Q5TDE8.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5TDE8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000335497 ; ENSP00000335580 ; ENSG00000187147 .

Organism-specific databases

HGNCi HGNC:25552. RNF220.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00390000016573.
HOGENOMi HOG000231748.
HOVERGENi HBG055526.

Miscellaneous databases

ChiTaRSi RNF220. human.
NextBioi 35539913.

Gene expression databases

ExpressionAtlasi Q5TDE8. baseline and differential.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., Langford C.F., Pandian R.D., Porter K.M., Prigmore E.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5TDE8_HUMAN
AccessioniPrimary (citable) accession number: Q5TDE8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3