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Protein
Submitted name:

E3 ubiquitin-protein ligase RNF220

Gene

RNF220

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase RNF220Imported
Gene namesi
Name:RNF220Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:25552. RNF220.

PTM / Processingi

Proteomic databases

PaxDbiQ5TDE7.
PeptideAtlasiQ5TDE7.
PRIDEiQ5TDE7.

Expressioni

Gene expression databases

BgeeiENSG00000187147.
ExpressionAtlasiQ5TDE7. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000347548.

Structurei

3D structure databases

ProteinModelPortaliQ5TDE7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 159116RNF220InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IEJC. Eukaryota.
ENOG4111JY9. LUCA.
GeneTreeiENSGT00390000016573.
HOGENOMiHOG000231748.
HOVERGENiHBG055526.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR031824. RNF220_mid.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF15926. RNF220. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q5TDE7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRARSGRRS RGAGGREETF LRVRANRQTR LNARIGKMKR RKQDEGQREG
60 70 80 90 100
SCMAEDDAVD IEHENNNRFE EYEWCGQKRI RATTLLEGGF RGSGFIMCSG
110 120 130 140 150
KENPDSDADL DVDGDDTLEY GKPQYTEADV IPCTGEEPGE AKEREALRGA
160 170 180 190 200
VLNGGPPSTR ITPEFSKWAS DEMPSTSNGE SSKQEAMQKT CKNSDIEKIT
210 220 230 240 250
EDSAVTTFEA LKARVRELER QLSRGDRYKC LICMDSYSMP LTSIQCWHVH

CEECWLRTL
Length:259
Mass (Da):29,305
Last modified:February 5, 2008 - v1
Checksum:iA0F41E7A203B68F7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei259 – 2591Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL122004 Genomic DNA. No translation available.
AL359373 Genomic DNA. No translation available.
AL596225 Genomic DNA. No translation available.
KF495935 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000440132; ENSP00000388533; ENSG00000187147.
UCSCiuc057fui.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL122004 Genomic DNA. No translation available.
AL359373 Genomic DNA. No translation available.
AL596225 Genomic DNA. No translation available.
KF495935 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliQ5TDE7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000347548.

Proteomic databases

PaxDbiQ5TDE7.
PeptideAtlasiQ5TDE7.
PRIDEiQ5TDE7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000440132; ENSP00000388533; ENSG00000187147.
UCSCiuc057fui.1. human.

Organism-specific databases

HGNCiHGNC:25552. RNF220.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IEJC. Eukaryota.
ENOG4111JY9. LUCA.
GeneTreeiENSGT00390000016573.
HOGENOMiHOG000231748.
HOVERGENiHBG055526.

Miscellaneous databases

ChiTaRSiRNF220. human.

Gene expression databases

BgeeiENSG00000187147.
ExpressionAtlasiQ5TDE7. baseline and differential.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR031824. RNF220_mid.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF15926. RNF220. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5TDE7_HUMAN
AccessioniPrimary (citable) accession number: Q5TDE7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.