Q5TDE7 (Q5TDE7_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
E3 ubiquitin-protein ligase RNF220 Ensembl ENSP00000388533

Gene names

Name:

RNF220 Ensembl ENSP00000388533

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000388533

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	259 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000388533

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	259	1	Ensembl ENSP00000388533

Sequences

	Sequence		Length	Mass (Da)
	Q5TDE7 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: A0F41E7A203B68F7	FASTA	259	29,305
	10 20 30 40 50 60 MPRARSGRRS RGAGGREETF LRVRANRQTR LNARIGKMKR RKQDEGQREG SCMAEDDAVD 70 80 90 100 110 120 IEHENNNRFE EYEWCGQKRI RATTLLEGGF RGSGFIMCSG KENPDSDADL DVDGDDTLEY 130 140 150 160 170 180 GKPQYTEADV IPCTGEEPGE AKEREALRGA VLNGGPPSTR ITPEFSKWAS DEMPSTSNGE 190 200 210 220 230 240 SSKQEAMQKT CKNSDIEKIT EDSAVTTFEA LKARVRELER QLSRGDRYKC LICMDSYSMP 250 LTSIQCWHVH CEECWLRTL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., Langford C.F., Pandian R.D., Porter K.M., Prigmore E. Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL122004 Genomic DNA. No translation available. AL359373 Genomic DNA. No translation available. AL596225 Genomic DNA. No translation available.
IPI	IPI00477181.
UniGene	Hs.456557.
3D structure databases
SMR	Q5TDE7. Positions 226-257.
ModBase	Search...
Proteomic databases
PRIDE	Q5TDE7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000440132; ENSP00000388533; ENSG00000187147.
UCSC	uc001clx.2. human.
Organism-specific databases
HGNC	HGNC:25552. RNF220.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	HOG000231748.
HOVERGEN	HBG055526.
Gene expression databases
ArrayExpress	Q5TDE7.
Family and domain databases
Gene3D	3.30.40.10. 1 hit.
InterPro	IPR013083. Znf_RING/FYVE/PHD. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	RNF220. human.
NextBio	35539912.

Entry information

Entry name

Q5TDE7_HUMAN

Accession

Primary (citable) accession number: Q5TDE7

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.