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Q5TCS8 (AKD1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Adenylate kinase domain-containing protein 1
Alternative name(s):
Adenylate kinase domain-containing protein 2
Gene names
Name:AKD1
Synonyms:AKD2, C6orf199, C6orf224
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1911 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Post-translational modification

Isoform 1 is phosphorylated on Ser-724. Ref.5

Sequence similarities

Belongs to the adenylate kinase family.

Sequence caution

The sequence AAI01715.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence AAI11949.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence BAC05368.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Alternative products

This entry describes 6 isoforms produced by alternative splicing. [Align] [Select]
Isoform 4 (identifier: Q5TCS8-4)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 1 (identifier: Q5TCS8-1)

The sequence of this isoform differs from the canonical sequence as follows:
     703-751: EARKATEEEL...EIEGDELEVH → KSHRRGIETR...CYCKQLQYFK
     752-1911: Missing.
Note: No experimental confirmation available. Phosphorylated on Ser-724.
Isoform 2 (identifier: Q5TCS8-2)

The sequence of this isoform differs from the canonical sequence as follows:
     420-421: VD → TN
     422-1911: Missing.
Isoform 3 (identifier: Q5TCS8-3)

The sequence of this isoform differs from the canonical sequence as follows:
     989-1014: APPLRICLVGPQGSGKTMCGRQLAEK → VRQYSYLNDCSHRIFLGLITNHHQFT
     1015-1911: Missing.
Isoform 5 (identifier: Q5TCS8-5)

The sequence of this isoform differs from the canonical sequence as follows:
     1-921: Missing.
     1212-1257: NVVRDDEEIS...SGEEDEEQET → VSSFVFFFKT...GSSHLSLSKC
     1258-1911: Missing.
Isoform 6 (identifier: Q5TCS8-6)

The sequence of this isoform differs from the canonical sequence as follows:
     1212-1283: NVVRDDEEIS...DTHNLQIIQD → PNKEKRKRGI...LSKQNIHNQK
     1284-1911: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 19111911Adenylate kinase domain-containing protein 1
PRO_0000304138

Regions

Coiled coil443 – 48543 Potential
Coiled coil676 – 71136 Potential
Compositional bias198 – 27578Glu-rich

Natural variations

Alternative sequence1 – 921921Missing in isoform 5.
VSP_039638
Alternative sequence420 – 4212VD → TN in isoform 2.
VSP_028008
Alternative sequence422 – 19111490Missing in isoform 2.
VSP_028009
Alternative sequence703 – 75149EARKA…ELEVH → KSHRRGIETRRRKSKATGTY ESEGKRQAQIAMTDDVSWYC YCKQLQYFK in isoform 1.
VSP_039639
Alternative sequence752 – 19111160Missing in isoform 1.
VSP_039640
Alternative sequence989 – 101426APPLR…QLAEK → VRQYSYLNDCSHRIFLGLIT NHHQFT in isoform 3.
VSP_028010
Alternative sequence1015 – 1911897Missing in isoform 3.
VSP_028011
Alternative sequence1212 – 128372NVVRD…QIIQD → PNKEKRKRGISENTTCYKCN HMSPWCEYAGLPYRGLLILY SATATATAGTKHCRSGAKVI VALSKQNIHNQK in isoform 6.
VSP_039641
Alternative sequence1212 – 125746NVVRD…EEQET → VSSFVFFFKTGSHSVAQGRV QWHNHSSLQPRTPGLKGSSH LSLSKC in isoform 5.
VSP_039642
Alternative sequence1258 – 1911654Missing in isoform 5.
VSP_039643
Alternative sequence1284 – 1911628Missing in isoform 6.
VSP_039644

Experimental info

Sequence conflict2221I → T in BAB70945. Ref.1
Sequence conflict17161K → R in BAC05368. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Isoform 4 [UniParc].

Last modified August 10, 2010. Version 2.
Checksum: 16A1888E727C51A4

FASTA1,911221,413
        10         20         30         40         50         60 
MTSQEKTEEY PFADIFDEDE TERNFLLSKP VCFVVFGKPG VGKTTLARYI TQAWKCIRVE 

        70         80         90        100        110        120 
ALPILEEQIA AETESGVMLQ SMLISGQSIP DELVIKLMLE KLNSPEVCHF GYIITEIPSL 

       130        140        150        160        170        180 
SQDAMTTLQQ IELIKNLNLK PDVIINIKCP DYDLCQRISG QRQHNNTGYI YSRDQWDPEV 

       190        200        210        220        230        240 
IENHRKKKKE AQKDGKGEEE EEEEEQEEEE AFIAEMQMVA EILHHLVQRP EDYLENVENI 

       250        260        270        280        290        300 
VKLYKETILQ TLEEVMAEHN PQYLIELNGN KPAEELFMIV MDRLKYLNLK RAAILTKLQG 

       310        320        330        340        350        360 
AEEEINDTME NDELFRTLAS YKLIAPRYRW QRSKWGRTCP VNLKDGNIYS GLPDYSVSFL 

       370        380        390        400        410        420 
GKIYCLSSEE ALKPFLLNPR PYLLPPMPGP PCKVFILGPQ YSGKTTLCNM LAENYKGKVV 

       430        440        450        460        470        480 
DYAQLVQPRF DKARETLVEN TIAEATAAAI KVVKEKLLRE LQARKQAETA LREFQRQYEK 

       490        500        510        520        530        540 
MEFGVFPMEA THSSIDEEGY IQGSQRDRGS SLVDTEEAKT KSENVLHDQA AKVDKDDGKE 

       550        560        570        580        590        600 
TGETFTFKRH SQDASQDVKL YSDTAPTEDL IEEVTADHPE VVTMIEETIK MSQDINFEQP 

       610        620        630        640        650        660 
YEKHAEILQE VLGEVMEENK DRFPGAPKYG GWIVDNCPIV KELWMALIKK GIIPDLVIYL 

       670        680        690        700        710        720 
SDTENNGKCL FNRIYLQKKS EIDSKILERL LEELQKKKKE EEEARKATEE ELRLEEENRR 

       730        740        750        760        770        780 
LLELMKVKAK EAEETDNEDE EEIEGDELEV HEEPEASHDT RGSWLPEEFE ASEVPETEPE 

       790        800        810        820        830        840 
AVSEPIEETT VETEIPKGSK EGLEIEKLSE TVVLPEFPED SYPDVPEMEP FKEKIGSFII 

       850        860        870        880        890        900 
LWKQLEATIS EAYIKILNLE IADRTPQELL QKVVETMEKP FQYTAWELTG EDYEEETEDY 

       910        920        930        940        950        960 
QTEAEVDEEL EEEEEEEGED KMKERKRHLG DTKHFCPVVL KENFILQPGN TEEAAKYREK 

       970        980        990       1000       1010       1020 
IYYFSSAEAK EKFLEHPEDY VAHEEPLKAP PLRICLVGPQ GSGKTMCGRQ LAEKLNIFHI 

      1030       1040       1050       1060       1070       1080 
QFEEVLQEKL LLKTEKKVGP EFEEDSENEQ AAKQELEELA IQANVKVEEE NTKKQLPEVQ 

      1090       1100       1110       1120       1130       1140 
LTEEEEVIKS SLMENEPLPP EILEVILSEW WLKEPIRSTG FILDGFPRYP EEAQFLGDRG 

      1150       1160       1170       1180       1190       1200 
FFPDAAVFIQ VDDQDIFDRL LPAQIEKWKL KQKKKLERKK LIKDMKAKIR VDTIAKRRAE 

      1210       1220       1230       1240       1250       1260 
LILERDKKRR ENVVRDDEEI SEEELEEDND DIENILEDEF PKDEEEMSGE EDEEQETDAI 

      1270       1280       1290       1300       1310       1320 
ERLRGELGEK FEADTHNLQI IQDELERYLI PIISINGARR NHIVQYTLNM KLKPLVENRA 

      1330       1340       1350       1360       1370       1380 
SIFEKCHPIP APLAQKMLTF TYKYISSFGY WDPVKLSEGE TIKPVENAEN PIYPVIHRQY 

      1390       1400       1410       1420       1430       1440 
IYFLSSKETK EKFMKNPIKY IRQPKPKPTV PIRIIIVGPP KSGKTTVAKK ITSEYGLKHL 

      1450       1460       1470       1480       1490       1500 
SIGGALRYVL NNHPETELAL MLNWHLHKGM TAPDELAIQA LELSLMESVC NTAGVVIDGY 

      1510       1520       1530       1540       1550       1560 
PVTKHQMNLL EARSIIPMVI FELSVPSKEI FKRLLLEKEN EQRLPYPLHN SAQIVAVNNV 

      1570       1580       1590       1600       1610       1620 
KYRKNIGEIR QYYQEQHQNW YVIDGFHSKW WVWNEVIKNV QMVNKYMQTY LERIKAGKAA 

      1630       1640       1650       1660       1670       1680 
CIDKLCITPQ ELLSRLGEFE QFCPVSLAES QELFDCSATD SLEFAAEFRG HYYKMSSQEK 

      1690       1700       1710       1720       1730       1740 
LNKFLENPEL YVPPLAPHPL PSADMIPKRL TLSELKSRFP KCAELQGYCP VTYKDGNQRY 

      1750       1760       1770       1780       1790       1800 
EALVPGSINY ALEYHNRIYI CENKEKLQKF LRSPLKYWEQ KLPHKLPPLR EPILLTSLPL 

      1810       1820       1830       1840       1850       1860 
PGYLEQGIAT SLIKAMNAAG CLKPKFPFLS IRRSALLYIA LHLKAFNPKG SEYTRKKYKK 

      1870       1880       1890       1900       1910 
KMEQFMESCE LITYLGAKMT RKYKEPQFRA IDFDHKLKTF LSLRNIDPIN G 

« Hide

Isoform 1 [UniParc].

Checksum: 5154893EA585590F
Show »

FASTA75186,644
Isoform 2 [UniParc].

Checksum: 18B996C20324D892
Show »

FASTA42148,501
Isoform 3 [UniParc].

Checksum: A8A3319DC3635FA1
Show »

FASTA1,014117,361
Isoform 5 [UniParc] [UniParc].

Checksum: 5FB4ED6C265E1CFE
Show »

FASTA33639,019
Isoform 6 [UniParc].

Checksum: 7A51010EC1323CE3
Show »

FASTA1,283148,193

References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 5), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 431-1911 (ISOFORM 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1563-1911 (ISOFORM 4).
Tissue: Caudate nucleus, Hair follicle dermal papilla, Placenta, Testis and Thymus.
[2]"The DNA sequence and analysis of human chromosome 6."
Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
Nature 425:805-811(2003) [PubMed: 14574404] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1067-1911 (ISOFORM 6), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1587-1911 (ISOFORM 4).
Tissue: Heart, Lung, Pituitary and Testis.
[5]"Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra."
Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.
J. Proteome Res. 6:4150-4162(2007) [PubMed: 17924679] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-724 (ISOFORM 1), MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK055538 mRNA. Translation: BAB70945.1.
AK098657 mRNA. Translation: BAC05368.1. Different initiation.
AK124171 mRNA. No translation available.
AK131244 mRNA. Translation: BAD18424.1.
AK315561 mRNA. Translation: BAG37937.1.
AL133472, AL121788 Genomic DNA. Translation: CAI19667.1.
AL133472, AL121788 Genomic DNA. Translation: CAI19668.1.
AL121788, AL133472 Genomic DNA. Translation: CAI22498.1.
AL121788, AL133472 Genomic DNA. Translation: CAI22499.1.
AL109947 Genomic DNA. No translation available.
AL139391 Genomic DNA. No translation available.
CH471051 Genomic DNA. Translation: EAW48333.1.
BC022031 mRNA. Translation: AAH22031.1.
BC087860 mRNA. Translation: AAH87860.1.
BC101714 mRNA. Translation: AAI01715.1. Different initiation.
BC111948 mRNA. Translation: AAI11949.1. Different initiation.
IPIIPI00418605.
IPI00552962.
IPI00556253.
IPI00641136.
IPI00856053.
IPI00930224.
RefSeqNP_001138600.2. NM_001145128.2.
NP_659462.1. NM_145025.4.
UniGeneHs.205144.

3D structure databases

HSSPHSSP built from PDB template 1KAG based on UniProtKB P0A6D7.
ProteinModelPortalQ5TCS8.
SMRQ5TCS8. Positions 28-291, 393-428, 1414-1602.
ModBaseSearch...

Protein-protein interaction databases

IntActQ5TCS8. 2 interactions.
MINTMINT-1369939.

PTM databases

PhosphoSiteQ5TCS8.

Polymorphism databases

DMDM302393675.

Proteomic databases

PRIDEQ5TCS8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000368948; ENSP00000357944; ENSG00000155085.
GeneID221264.
KEGGhsa:221264.
UCSCuc003ptr.2. human.

Organism-specific databases

CTD221264.
GeneCardsGC06M109814.
HGNCHGNC:33814. AKD1.
HPAHPA031779.
neXtProtNX_Q5TCS8.
PharmGKBPA162380441.
PA164715270.
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG107661.
OMALGIFHIQ.

Gene expression databases

ArrayExpressQ5TCS8.
BgeeQ5TCS8.
CleanExHS_C6orf199.
GenevestigatorQ5TCS8.

Family and domain databases

InterProIPR000850. Adenylate_kin.
IPR003593. ATPase_AAA+_core.
IPR007029. YHS.
[Graphical view]
PANTHERPTHR23359. Adenylate_kin. 1 hit.
PfamPF00406. ADK. 3 hits.
PF04945. YHS. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 3 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio91262.
91612.

Entry information

Entry nameAKD1_HUMAN
AccessionPrimary (citable) accession number: Q5TCS8
Secondary accession number(s): A6NL75 expand/collapse secondary AC list , B2RDJ0, B6ZDM7, Q3MIS4, Q5I0W8, Q6ZNF1, Q6ZVR7, Q8N7C6, Q8WW00, Q96NF4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: August 10, 2010
Last modified: January 25, 2012
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 6

Human chromosome 6: entries, gene names and cross-references to MIM

SIMILARITY comments

Index of protein domains and families