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Q5TBF5

- Q5TBF5_HUMAN

UniProt

Q5TBF5 - Q5TBF5_HUMAN

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Protein
Submitted name:

Mimecan

Gene

OGN

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
MimecanImported
Gene namesi
Name:OGNImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 9

Organism-specific databases

HGNCiHGNC:8126. OGN.

PTM / Processingi

Proteomic databases

PRIDEiQ5TBF5.

Expressioni

Gene expression databases

ExpressionAtlasiQ5TBF5. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5TBF5.
SMRiQ5TBF5. Positions 150-268.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Leucine-rich repeatSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00730000110781.
HOGENOMiHOG000273909.
HOVERGENiHBG006850.

Family and domain databases

InterProiIPR001611. Leu-rich_rpt.
IPR000372. LRR-contain_N.
IPR027211. Mimecan.
[Graphical view]
PANTHERiPTHR24371:SF5. PTHR24371:SF5. 1 hit.
PfamiPF13855. LRR_8. 1 hit.
[Graphical view]
SMARTiSM00013. LRRNT. 1 hit.
[Graphical view]
PROSITEiPS51450. LRR. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q5TBF5 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLAKISTTWK LFLKLLGPEI LLSSLKSRHS FSHSPSHLGL MHRHEHLLRK
60 70 80 90 100
TTKNFKTATT TLQSTLLLLL LVPLIKPAPP TQQDSRIIYD YGTDNFEESI
110 120 130 140 150
FSQDYEDKYL DGKNIKEKET VIIPNEKSLQ LQKDEAITPL PPKKENDEMP
160 170 180 190 200
TCLLCVCLSG SVYCEEVDID AVPPLPKESA YLYARFNKIK KLTAKDFADI
210 220 230 240 250
PNLRRLDFTG NLIEDIEDGT FSKLSLLEEL SLAENQLLKL PVLPPKLTLF
260
NAKYNKIKSR GIKANAFK
Length:268
Mass (Da):30,456
Last modified:December 21, 2004 - v1
Checksum:i7DF3AD748C11361C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei268 – 2681Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL137848 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000447356; ENSP00000396709; ENSG00000106809.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL137848 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali Q5TBF5.
SMRi Q5TBF5. Positions 150-268.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5TBF5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000447356 ; ENSP00000396709 ; ENSG00000106809 .

Organism-specific databases

HGNCi HGNC:8126. OGN.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00730000110781.
HOGENOMi HOG000273909.
HOVERGENi HBG006850.

Miscellaneous databases

NextBioi 35539860.

Gene expression databases

ExpressionAtlasi Q5TBF5. baseline and differential.

Family and domain databases

InterProi IPR001611. Leu-rich_rpt.
IPR000372. LRR-contain_N.
IPR027211. Mimecan.
[Graphical view ]
PANTHERi PTHR24371:SF5. PTHR24371:SF5. 1 hit.
Pfami PF13855. LRR_8. 1 hit.
[Graphical view ]
SMARTi SM00013. LRRNT. 1 hit.
[Graphical view ]
PROSITEi PS51450. LRR. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5TBF5_HUMAN
AccessioniPrimary (citable) accession number: Q5TBF5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: October 29, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3