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Q5TBF5

- Q5TBF5_HUMAN

UniProt

Q5TBF5 - Q5TBF5_HUMAN

Protein
Submitted name:

Mimecan

Gene

OGN

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MimecanImported
    Gene namesi
    Name:OGNImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 9

    Organism-specific databases

    HGNCiHGNC:8126. OGN.

    PTM / Processingi

    Proteomic databases

    PRIDEiQ5TBF5.

    Expressioni

    Gene expression databases

    ArrayExpressiQ5TBF5.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5TBF5.
    SMRiQ5TBF5. Positions 150-268.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Leucine-rich repeatSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000273909.
    HOVERGENiHBG006850.

    Family and domain databases

    InterProiIPR001611. Leu-rich_rpt.
    IPR000372. LRR-contain_N.
    IPR027211. Mimecan.
    [Graphical view]
    PANTHERiPTHR24371:SF5. PTHR24371:SF5. 1 hit.
    PfamiPF13855. LRR_8. 1 hit.
    [Graphical view]
    SMARTiSM00013. LRRNT. 1 hit.
    [Graphical view]
    PROSITEiPS51450. LRR. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q5TBF5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLAKISTTWK LFLKLLGPEI LLSSLKSRHS FSHSPSHLGL MHRHEHLLRK    50
    TTKNFKTATT TLQSTLLLLL LVPLIKPAPP TQQDSRIIYD YGTDNFEESI 100
    FSQDYEDKYL DGKNIKEKET VIIPNEKSLQ LQKDEAITPL PPKKENDEMP 150
    TCLLCVCLSG SVYCEEVDID AVPPLPKESA YLYARFNKIK KLTAKDFADI 200
    PNLRRLDFTG NLIEDIEDGT FSKLSLLEEL SLAENQLLKL PVLPPKLTLF 250
    NAKYNKIKSR GIKANAFK 268
    Length:268
    Mass (Da):30,456
    Last modified:December 21, 2004 - v1
    Checksum:i7DF3AD748C11361C
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei268 – 2681Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL137848 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000447356; ENSP00000396709; ENSG00000106809.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL137848 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali Q5TBF5.
    SMRi Q5TBF5. Positions 150-268.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q5TBF5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000447356 ; ENSP00000396709 ; ENSG00000106809 .

    Organism-specific databases

    HGNCi HGNC:8126. OGN.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000273909.
    HOVERGENi HBG006850.

    Miscellaneous databases

    NextBioi 35539860.

    Gene expression databases

    ArrayExpressi Q5TBF5.

    Family and domain databases

    InterProi IPR001611. Leu-rich_rpt.
    IPR000372. LRR-contain_N.
    IPR027211. Mimecan.
    [Graphical view ]
    PANTHERi PTHR24371:SF5. PTHR24371:SF5. 1 hit.
    Pfami PF13855. LRR_8. 1 hit.
    [Graphical view ]
    SMARTi SM00013. LRRNT. 1 hit.
    [Graphical view ]
    PROSITEi PS51450. LRR. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of human chromosome 9."
      Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
      , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
      Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiQ5TBF5_HUMAN
    AccessioniPrimary (citable) accession number: Q5TBF5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 21, 2004
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3