Q5T8D3 (ACBD5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 76.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Acyl-CoA-binding domain-containing protein 5 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 534 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Binds medium- and long-chain acyl-CoA esters. |
| Subcellular location | Peroxisome membrane; Single-pass membrane protein By similarity. |
| Sequence similarities | Contains 1 ACB (acyl-CoA-binding) domain. |
| Sequence caution | The sequence AAH30555.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transport |
| Cellular component | Membrane Peroxisome |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil Transmembrane Transmembrane helix |
| Ligand | Lipid-binding |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW intracellular membrane-bounded organelleInferred from direct assay. Source: HPA peroxisomal membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | fatty-acyl-CoA binding Inferred from electronic annotation. Source: InterPro lipid bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q5T8D3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q5T8D3-2) The sequence of this isoform differs from the canonical sequence as follows: 1-33: Missing. 162-172: Missing. | ||||||
| Note: Contains a phosphothreonine at position 137. | ||||||
| Isoform 3 (identifier: Q5T8D3-3) The sequence of this isoform differs from the canonical sequence as follows: 1-3: MFQ → MLFLS 162-172: Missing. | ||||||
| Note: Contains a phosphothreonine at position 172. | ||||||
| Isoform 4 (identifier: Q5T8D3-4) The sequence of this isoform differs from the canonical sequence as follows: 1-107: Missing. 162-172: Missing. | ||||||
| Note: Contains a phosphothreonine at position 63. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||
Molecule processing | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 534 | 534 | Acyl-CoA-binding domain-containing protein 5 | PRO_0000287377 | ||||||||||||||
Regions | ||||||||||||||||||
| Transmembrane | 506 – 526 | 21 | Helical; Potential | |||||||||||||||
| Domain | 41 – 130 | 90 | ACB | |||||||||||||||
| Region | 52 – 61 | 10 | Acyl-CoA binding | |||||||||||||||
| Region | 72 – 76 | 5 | Acyl-CoA binding | |||||||||||||||
| Coiled coil | 190 – 219 | 30 | Potential | |||||||||||||||
| Coiled coil | 447 – 476 | 30 | Potential | |||||||||||||||
| Compositional bias | 13 – 16 | 4 | Poly-Cys | |||||||||||||||
| Compositional bias | 201 – 204 | 4 | Poly-Glu | |||||||||||||||
| Compositional bias | 528 – 531 | 4 | Poly-Arg | |||||||||||||||
Sites | ||||||||||||||||||
| Binding site | 98 | 1 | Acyl-CoA | |||||||||||||||
| Binding site | 117 | 1 | Acyl-CoA By similarity | |||||||||||||||
Amino acid modifications | ||||||||||||||||||
| Modified residue | 160 | 1 | Phosphothreonine By similarity | |||||||||||||||
| Modified residue | 193 | 1 | Phosphoserine Ref.9 | |||||||||||||||
| Modified residue | 194 | 1 | Phosphoserine Ref.9 | |||||||||||||||
| Modified residue | 196 | 1 | Phosphoserine Ref.9 | |||||||||||||||
| Modified residue | 200 | 1 | Phosphoserine Ref.7 Ref.8 Ref.9 Ref.10 | |||||||||||||||
| Modified residue | 400 | 1 | Phosphothreonine Ref.8 | |||||||||||||||
| Modified residue | 428 | 1 | Phosphoserine Ref.8 | |||||||||||||||
| Modified residue | 441 | 1 | Phosphoserine By similarity | |||||||||||||||
Natural variations | ||||||||||||||||||
| Alternative sequence | 1 – 107 | 107 | Missing in isoform 4. | VSP_025448 | ||||||||||||||
| Alternative sequence | 1 – 33 | 33 | Missing in isoform 2. | VSP_025447 | ||||||||||||||
| Alternative sequence | 1 – 3 | 3 | MFQ → MLFLS in isoform 3. | VSP_025446 | ||||||||||||||
| Alternative sequence | 162 – 172 | 11 | Missing in isoform 2, isoform 3 and isoform 4. | VSP_025449 | ||||||||||||||
| Natural variant | 472 | 1 | T → M. Corresponds to variant rs7918793 [ dbSNP | Ensembl ]. | VAR_032301 | ||||||||||||||
Experimental info | ||||||||||||||||||
| Sequence conflict | 332 | 1 | P → Q in AAP30852. Ref.1 | |||||||||||||||
| Sequence conflict | 419 | 1 | E → D in AAP30852. Ref.1 | |||||||||||||||
| Sequence conflict | 478 | 1 | A → T in AAP30852. Ref.1 | |||||||||||||||
Secondary structure | ||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||
| Helix | 41 – 58 | 18 | ||||||||||||||||
| Helix | 65 – 79 | 15 | ||||||||||||||||
| Helix | 93 – 104 | 12 | ||||||||||||||||
| Turn | 105 – 107 | 3 | ||||||||||||||||
| Helix | 110 – 127 | 18 | ||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Functional research of a new human gene related to endozepine." Ye X., Mao Y., Xie Y. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4). |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Testis. |
| [3] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Blood. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 252-534. Tissue: Testis. |
| [7] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-200, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-200; THR-400 AND SER-428, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-193; SER-194; SER-196 AND SER-200, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-137 (ISOFORM 2), PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-172 (ISOFORM 3), PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-63 (ISOFORM 4), MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [10] | "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography." Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J. Proteomics 8:1346-1361(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-200, MASS SPECTROMETRY. Tissue: Liver. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-137 (ISOFORM 2), PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-172 (ISOFORM 3), PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-63 (ISOFORM 4), MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [12] | "The crystal structure of human acyl-coenzyme A binding domain containing 5." Structural genomics consortium (SGC) Submitted (JUL-2011) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS) OF 41-136 IN COMPLEX WITH COENZYME A AND STEARIC ACID. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF505653 mRNA. Translation: AAP30852.1. AK057469 mRNA. Translation: BAG51918.1. AL160291 Genomic DNA. Translation: CAI16911.1. AL160291 Genomic DNA. Translation: CAI16912.1. AL160291 Genomic DNA. Translation: CAI16913.1. AL160291 Genomic DNA. Translation: CAI16914.1. AL160291 Genomic DNA. Translation: CAI16915.1. CH471072 Genomic DNA. Translation: EAW86062.1. CH471072 Genomic DNA. Translation: EAW86061.1. CH471072 Genomic DNA. Translation: EAW86063.1. BC030555 mRNA. Translation: AAH30555.1. Different initiation. AL133064 mRNA. Translation: CAB61388.1. | ||||||||||||
| IPI | IPI00186681. IPI00550377. IPI00640010. IPI00644427. | ||||||||||||
| PIR | T42665. | ||||||||||||
| RefSeq | NP_001035938.1. NM_001042473.2. NP_663736.2. NM_145698.3. | ||||||||||||
| UniGene | Hs.530597. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q5T8D3. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | Q5T8D3. 1 interaction. | ||||||||||||
| STRING | 9606.ENSP00000379568. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q5T8D3. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 74745508. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | Q5T8D3. | ||||||||||||
| PRIDE | Q5T8D3. | ||||||||||||
Protocols and materials databases | |||||||||||||
| DNASU | 91452. | ||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000375888; ENSP00000365049; ENSG00000107897. ENST00000375901; ENSP00000365066; ENSG00000107897. ENST00000375905; ENSP00000365070; ENSG00000107897. ENST00000396271; ENSP00000379568; ENSG00000107897. ENST00000412279; ENSP00000393398; ENSG00000107897. | ||||||||||||
| GeneID | 91452. | ||||||||||||
| KEGG | hsa:91452. | ||||||||||||
| UCSC | uc001ito.3. human. uc001itp.3. human. uc001itr.1. human. uc010qdp.2. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 91452. | ||||||||||||
| GeneCards | GC10M027484. | ||||||||||||
| HGNC | HGNC:23338. ACBD5. | ||||||||||||
| HPA | HPA011861. HPA012145. | ||||||||||||
| neXtProt | NX_Q5T8D3. | ||||||||||||
| PharmGKB | PA134892991. | ||||||||||||
| HUGE | Search... | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | COG4281. | ||||||||||||
| HOVERGEN | HBG106445. | ||||||||||||
| OMA | GRGHRMQ. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q5T8D3. | ||||||||||||
| Bgee | Q5T8D3. | ||||||||||||
| CleanEx | HS_ACBD5. | ||||||||||||
| Genevestigator | Q5T8D3. | ||||||||||||
Family and domain databases | |||||||||||||
| Gene3D | 1.20.80.10. 1 hit. | ||||||||||||
| InterPro | IPR022408. Acyl-CoA-binding_prot_CS. IPR000582. Acyl-CoA-binding_protein. IPR014352. FERM/acyl-CoA-bd_prot_3-hlx. IPR016347. M-assoc_diazepam-bd-inh. [Graphical view] | ||||||||||||
| Pfam | PF00887. ACBP. 1 hit. [Graphical view] | ||||||||||||
| PIRSF | PIRSF002412. MA_DBI. 1 hit. | ||||||||||||
| PRINTS | PR00689. ACOABINDINGP. | ||||||||||||
| SUPFAM | SSF47027. ACBP. 1 hit. | ||||||||||||
| PROSITE | PS00880. ACB_1. 1 hit. PS51228. ACB_2. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| ChiTaRS | ACBD5. human. | ||||||||||||
| EvolutionaryTrace | Q5T8D3. | ||||||||||||
| GenomeRNAi | 91452. | ||||||||||||
| NextBio | 77259. | ||||||||||||
Entry information
| Entry name | ACBD5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q5T8D3 Secondary accession number(s): B3KQ56 Q9UFB5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
