Reviewed,
UniProtKB/Swiss-Prot Q5T8D3 (ACBD5_HUMAN)
Last modified
November 24, 2009.
Version 45.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Acyl-CoA-binding domain-containing protein 5 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 534 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | Membrane; Single-pass membrane protein Potential. |
| Sequence similarities | Contains 1 ACB (acyl-CoA-binding) domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transport |
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil Transmembrane |
| Ligand | Lipid-binding |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| Biological process | transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | acyl-CoA binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q5T8D3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q5T8D3-2) The sequence of this isoform differs from the canonical sequence as follows: 1-33: Missing. 162-172: Missing. | ||||||
| Isoform 3 (identifier: Q5T8D3-3) The sequence of this isoform differs from the canonical sequence as follows: 1-3: MFQ → MLFLS 162-172: Missing. | ||||||
| Isoform 4 (identifier: Q5T8D3-4) The sequence of this isoform differs from the canonical sequence as follows: 1-107: Missing. 162-172: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||
Molecule processing | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 534 | 534 | Acyl-CoA-binding domain-containing protein 5 | PRO_0000287377 | ||||||||||||||
Regions | ||||||||||||||||||
| Transmembrane | 506 – 526 | 21 | Potential | |||||||||||||||
| Domain | 41 – 130 | 90 | ACB | |||||||||||||||
| Coiled coil | 190 – 219 | 30 | Potential | |||||||||||||||
| Coiled coil | 447 – 476 | 30 | Potential | |||||||||||||||
| Compositional bias | 13 – 16 | 4 | Poly-Cys | |||||||||||||||
| Compositional bias | 201 – 204 | 4 | Poly-Glu | |||||||||||||||
| Compositional bias | 528 – 531 | 4 | Poly-Arg | |||||||||||||||
Amino acid modifications | ||||||||||||||||||
| Modified residue | 127 | 1 | Phosphothreonine Ref.9 | |||||||||||||||
| Modified residue | 131 | 1 | Phosphothreonine Ref.9 | |||||||||||||||
| Modified residue | 156 | 1 | Phosphoserine Ref.7 | |||||||||||||||
| Modified residue | 160 | 1 | Phosphothreonine By similarity | |||||||||||||||
| Modified residue | 181 | 1 | Phosphothreonine | |||||||||||||||
| Modified residue | 193 | 1 | Phosphoserine Ref.11 | |||||||||||||||
| Modified residue | 194 | 1 | Phosphoserine Ref.11 | |||||||||||||||
| Modified residue | 196 | 1 | Phosphoserine Ref.11 Ref.10 Ref.12 | |||||||||||||||
| Modified residue | 200 | 1 | Phosphoserine Ref.11 Ref.10 Ref.12 | |||||||||||||||
| Modified residue | 215 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 256 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 296 | 1 | Phosphothreonine Ref.8 | |||||||||||||||
| Modified residue | 388 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 400 | 1 | Phosphothreonine Ref.10 | |||||||||||||||
| Modified residue | 418 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 428 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 437 | 1 | Phosphoserine Ref.10 | |||||||||||||||
| Modified residue | 441 | 1 | Phosphoserine By similarity | |||||||||||||||
Natural variations | ||||||||||||||||||
| Alternative sequence | 1 – 107 | 107 | Missing in isoform 4. | VSP_025448 | ||||||||||||||
| Alternative sequence | 1 – 33 | 33 | Missing in isoform 2. | VSP_025447 | ||||||||||||||
| Alternative sequence | 1 – 3 | 3 | MFQ → MLFLS in isoform 3. | VSP_025446 | ||||||||||||||
| Alternative sequence | 162 – 172 | 11 | Missing in isoform 2, isoform 3 and isoform 4. | VSP_025449 | ||||||||||||||
| Natural variant | 472 | 1 | T → M: dbSNP rs7918793. | VAR_032301 | ||||||||||||||
Experimental info | ||||||||||||||||||
| Sequence conflict | 332 | 1 | P → Q in AAP30852. Ref.1 | |||||||||||||||
| Sequence conflict | 419 | 1 | E → D in AAP30852. Ref.1 | |||||||||||||||
| Sequence conflict | 478 | 1 | A → T in AAP30852. Ref.1 | |||||||||||||||
Secondary structure | ||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||
| Helix | 41 – 54 | 14 | ||||||||||||||||
| Turn | 55 – 57 | 3 | ||||||||||||||||
| Helix | 65 – 79 | 15 | ||||||||||||||||
| Helix | 97 – 104 | 8 | ||||||||||||||||
| Helix | 110 – 127 | 18 | ||||||||||||||||
Sequences
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References
| [1] | "Functional research of a new human gene related to endozepine." Ye X., Mao Y., Xie Y. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4). |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Testis. |
| [3] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed: 15164054] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Blood. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 252-534. Tissue: Testis. |
| [7] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-156, MASS SPECTROMETRY. Tissue: Epithelium. |
| [8] | "Evaluation of the low-specificity protease elastase for large-scale phosphoproteome analysis." Wang B., Malik R., Nigg E.A., Korner R. Anal. Chem. 80:9526-9533(2008) [PubMed: 19007248] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-296, MASS SPECTROMETRY. |
| [9] | "Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column." Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y. Anal. Sci. 24:161-166(2008) [PubMed: 18187866] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-127 AND THR-131, MASS SPECTROMETRY. |
| [10] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-196; SER-200; SER-215; SER-256; SER-388; THR-400; SER-418; SER-428 AND SER-437, MASS SPECTROMETRY. |
| [11] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-193; SER-194; SER-196 AND SER-200, MASS SPECTROMETRY. |
| [12] | "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography." Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J. Proteomics 8:1346-1361(2008) [PubMed: 18318008] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-196 AND SER-200, MASS SPECTROMETRY. Tissue: Liver. |
| [13] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-181, MASS SPECTROMETRY. Tissue: T-cell. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AF505653 mRNA. Translation: AAP30852.1. AK057469 mRNA. Translation: BAG51918.1. AL160291 Genomic DNA. Translation: CAI16911.1. AL160291 Genomic DNA. Translation: CAI16912.1. AL160291 Genomic DNA. Translation: CAI16913.1. AL160291 Genomic DNA. Translation: CAI16914.1. AL160291 Genomic DNA. Translation: CAI16915.1. CH471072 Genomic DNA. Translation: EAW86062.1. BC030555 mRNA. Translation: AAH30555.1. Different initiation. AL133064 mRNA. Translation: CAB61388.1. | |||||||||||||
| IPI | IPI00186681. IPI00550377. IPI00640010. IPI00644427. | ||||||||||||
| PIR | T42665. | ||||||||||||
| RefSeq | NP_001035938.1. NP_663736.2. | ||||||||||||
| UniGene | Hs.530597 | ||||||||||||
3D structure databases | |||||||||||||
| |||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| STRING | Q5T8D3. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q5T8D3. | ||||||||||||
Proteomic databases | |||||||||||||
| PRIDE | Q5T8D3. | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000375888; ENSP00000365049; ENSG00000107897; Homo sapiens. [Genome view] | ||||||||||||
| GeneID | 91452. | ||||||||||||
| KEGG | hsa:91452. | ||||||||||||
| UCSC | uc001itn.1. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 91452. | ||||||||||||
| GeneCards | GC10M027525. | ||||||||||||
| HGNC | HGNC:23338. ACBD5. | ||||||||||||
| HPA | HPA011861. HPA012145. | ||||||||||||
| PharmGKB | PA134892991. | ||||||||||||
| HUGE | Search... | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | Q5T8D3. | ||||||||||||
| HOVERGEN | Q5T8D3. | ||||||||||||
| OMA | GHRMQHL | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q5T8D3. | ||||||||||||
| Bgee | Q5T8D3. | ||||||||||||
| CleanEx | HS_ACBD5. | ||||||||||||
| Genevestigator | Q5T8D3. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR000582. Acyl-CoA-binding_protein. IPR014352. FERM/acyl-CoA_bd_prot_3-hlx. IPR016347. M-assoc_diazepam-bd-inh. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:1.20.80.10. ACBP. 1 hit. | ||||||||||||
| PANTHER | PTHR23310. ACBP. 1 hit. | ||||||||||||
| Pfam | PF00887. ACBP. 1 hit. [Graphical view] | ||||||||||||
| PIRSF | PIRSF002412. MA_DBI. 1 hit. | ||||||||||||
| PRINTS | PR00689. ACOABINDINGP. | ||||||||||||
| PROSITE | PS00880. ACB_1. 1 hit. PS51228. ACB_2. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other Resources | |||||||||||||
| NextBio | 77259. | ||||||||||||
Entry information
| Entry name | ACBD5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q5T8D3 Secondary accession number(s): B3KQ56 Q9UFB5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


