Q5T7N8 (F27D1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein FAM27D1

Gene names

Name:

FAM27D1

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	215 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Belongs to the FAM27 family.
Sequence caution	The sequence CAI13103.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 215	215	Protein FAM27D1		PRO_0000340731
Experimental info
	Sequence conflict	123	1	H → Q in CAH71857. Ref.1

Sequences

	Sequence		Length	Mass (Da)
	Q5T7N8 [UniParc]. Last modified June 10, 2008. Version 2. Checksum: 373912211945D5BA	FASTA	215	24,905
	10 20 30 40 50 60 MLEKRLLRMG MRLQLLRDRR ISSRGPGLHR AKADPQQQKR LTTGLMTQAE TQKEAQQRQA 70 80 90 100 110 120 AMRKTALWHT GHLQPKTHTH TGMHTQTHRE RERNTQRLRD RERRENGRHT HRHTHTLTHT 130 140 150 160 170 180 HTHRDTHTAS YRRGIETHTT RQPLRLRGSA HDENDPRVRE QPRGTQADLS SRSRMAARLL 190 200 210 GRLTPTNTVR AGLRLGSRAA SPDPAWGFLI VVGPL

References

[1]

"DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I. Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL773537 Genomic DNA. Translation: CAH71857.1. AL162731 Genomic DNA. Translation: CAI13103.1. Different initiation.
IPI	IPI00478489.
3D structure databases
ModBase	Search...
Polymorphism databases
DMDM	190359334.
Proteomic databases
PaxDb	Q5T7N8.
PRIDE	Q5T7N8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000417276; ENSP00000393138; ENSG00000231997.
Organism-specific databases
GeneCards	GC09M045730. GC09P046394. GC09P067794.
HGNC	HGNC:32015. FAM27D1.
HPA	HPA051093.
neXtProt	NX_Q5T7N8.
GenAtlas	Search...
Phylogenomic databases
eggNOG	NOG241687.
HOGENOM	HOG000170905.
OrthoDB	EOG4G4GRX.
Gene expression databases
ArrayExpress	Q5T7N8.
Bgee	Q5T7N8.
Genevestigator	Q5T7N8.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

F27D1_HUMAN

Accession

Primary (citable) accession number: Q5T7N8
Secondary accession number(s): Q5VSL6

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 1, 2013
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.