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Protein

Protein FAM27D1

Gene

FAM27D1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM27D1
Gene namesi
Name:FAM27D1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:32015. FAM27D1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 215215Protein FAM27D1PRO_0000340731Add
BLAST

Proteomic databases

PaxDbiQ5T7N8.
PRIDEiQ5T7N8.

Expressioni

Gene expression databases

BgeeiQ5T7N8.
GenevestigatoriQ5T7N8.

Organism-specific databases

HPAiHPA051093.

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM27 family.Curated

Phylogenomic databases

eggNOGiNOG241687.
HOGENOMiHOG000170905.
InParanoidiQ5T7N8.
OrthoDBiEOG715Q7D.

Sequencei

Sequence statusi: Complete.

Q5T7N8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLEKRLLRMG MRLQLLRDRR ISSRGPGLHR AKADPQQQKR LTTGLMTQAE
60 70 80 90 100
TQKEAQQRQA AMRKTALWHT GHLQPKTHTH TGMHTQTHRE RERNTQRLRD
110 120 130 140 150
RERRENGRHT HRHTHTLTHT HTHRDTHTAS YRRGIETHTT RQPLRLRGSA
160 170 180 190 200
HDENDPRVRE QPRGTQADLS SRSRMAARLL GRLTPTNTVR AGLRLGSRAA
210
SPDPAWGFLI VVGPL
Length:215
Mass (Da):24,905
Last modified:June 10, 2008 - v2
Checksum:i373912211945D5BA
GO

Sequence cautioni

The sequence CAI13103.1 differs from that shown. Reason: Erroneous initiation. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti123 – 1231H → Q in CAH71857. (PubMed:15164053)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL773537 Genomic DNA. Translation: CAH71857.1.
AL162731 Genomic DNA. Translation: CAI13103.1. Different initiation.

Polymorphism databases

DMDMi190359334.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL773537 Genomic DNA. Translation: CAH71857.1.
AL162731 Genomic DNA. Translation: CAI13103.1. Different initiation.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Polymorphism databases

DMDMi190359334.

Proteomic databases

PaxDbiQ5T7N8.
PRIDEiQ5T7N8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiGC09P046389.
HGNCiHGNC:32015. FAM27D1.
HPAiHPA051093.
neXtProtiNX_Q5T7N8.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG241687.
HOGENOMiHOG000170905.
InParanoidiQ5T7N8.
OrthoDBiEOG715Q7D.

Miscellaneous databases

PROiQ5T7N8.

Gene expression databases

BgeeiQ5T7N8.
GenevestigatoriQ5T7N8.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiF27D1_HUMAN
AccessioniPrimary (citable) accession number: Q5T7N8
Secondary accession number(s): Q5VSL6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: January 7, 2015
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.