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Q5T7N8

- F27D1_HUMAN

UniProt

Q5T7N8 - F27D1_HUMAN

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Protein
Protein FAM27D1
Gene
FAM27D1
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM27D1
Gene namesi
Name:FAM27D1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 9

Organism-specific databases

HGNCiHGNC:32015. FAM27D1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 215215Protein FAM27D1
PRO_0000340731Add
BLAST

Proteomic databases

PaxDbiQ5T7N8.
PRIDEiQ5T7N8.

Expressioni

Gene expression databases

BgeeiQ5T7N8.
GenevestigatoriQ5T7N8.

Organism-specific databases

HPAiHPA051093.

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM27 family.

Phylogenomic databases

eggNOGiNOG241687.
HOGENOMiHOG000170905.
OrthoDBiEOG715Q7D.

Sequencei

Sequence statusi: Complete.

Q5T7N8-1 [UniParc]FASTAAdd to Basket

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MLEKRLLRMG MRLQLLRDRR ISSRGPGLHR AKADPQQQKR LTTGLMTQAE    50
TQKEAQQRQA AMRKTALWHT GHLQPKTHTH TGMHTQTHRE RERNTQRLRD 100
RERRENGRHT HRHTHTLTHT HTHRDTHTAS YRRGIETHTT RQPLRLRGSA 150
HDENDPRVRE QPRGTQADLS SRSRMAARLL GRLTPTNTVR AGLRLGSRAA 200
SPDPAWGFLI VVGPL 215
Length:215
Mass (Da):24,905
Last modified:June 10, 2008 - v2
Checksum:i373912211945D5BA
GO

Sequence cautioni

The sequence CAI13103.1 differs from that shown. Reason: Erroneous initiation.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti123 – 1231H → Q in CAH71857. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL773537 Genomic DNA. Translation: CAH71857.1.
AL162731 Genomic DNA. Translation: CAI13103.1. Different initiation.

Genome annotation databases

EnsembliENST00000417276; ENSP00000393138; ENSG00000231997.

Polymorphism databases

DMDMi190359334.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL773537 Genomic DNA. Translation: CAH71857.1 .
AL162731 Genomic DNA. Translation: CAI13103.1 . Different initiation.

3D structure databases

ModBasei Search...
MobiDBi Search...

Polymorphism databases

DMDMi 190359334.

Proteomic databases

PaxDbi Q5T7N8.
PRIDEi Q5T7N8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000417276 ; ENSP00000393138 ; ENSG00000231997 .

Organism-specific databases

GeneCardsi GC09P046389.
HGNCi HGNC:32015. FAM27D1.
HPAi HPA051093.
neXtProti NX_Q5T7N8.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG241687.
HOGENOMi HOG000170905.
OrthoDBi EOG715Q7D.

Miscellaneous databases

PROi Q5T7N8.

Gene expression databases

Bgeei Q5T7N8.
Genevestigatori Q5T7N8.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiF27D1_HUMAN
AccessioniPrimary (citable) accession number: Q5T7N8
Secondary accession number(s): Q5VSL6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: January 22, 2014
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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