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Q5T7N8 (F27D1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 22, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein FAM27D1
Gene names
Name:FAM27D1
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FAM27 family.

Sequence caution

The sequence CAI13103.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 215215Protein FAM27D1
PRO_0000340731

Experimental info

Sequence conflict1231H → Q in CAH71857. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q5T7N8 [UniParc].

Last modified June 10, 2008. Version 2.
Checksum: 373912211945D5BA

FASTA21524,905
        10         20         30         40         50         60 
MLEKRLLRMG MRLQLLRDRR ISSRGPGLHR AKADPQQQKR LTTGLMTQAE TQKEAQQRQA 

        70         80         90        100        110        120 
AMRKTALWHT GHLQPKTHTH TGMHTQTHRE RERNTQRLRD RERRENGRHT HRHTHTLTHT 

       130        140        150        160        170        180 
HTHRDTHTAS YRRGIETHTT RQPLRLRGSA HDENDPRVRE QPRGTQADLS SRSRMAARLL 

       190        200        210 
GRLTPTNTVR AGLRLGSRAA SPDPAWGFLI VVGPL 

« Hide

References

[1]"DNA sequence and analysis of human chromosome 9."
Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. expand/collapse author list , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL773537 Genomic DNA. Translation: CAH71857.1.
AL162731 Genomic DNA. Translation: CAI13103.1. Different initiation.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Polymorphism databases

DMDM190359334.

Proteomic databases

PaxDbQ5T7N8.
PRIDEQ5T7N8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000417276; ENSP00000393138; ENSG00000231997.

Organism-specific databases

GeneCardsGC09P046389.
HGNCHGNC:32015. FAM27D1.
HPAHPA051093.
neXtProtNX_Q5T7N8.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG241687.
HOGENOMHOG000170905.
OrthoDBEOG715Q7D.

Gene expression databases

BgeeQ5T7N8.
GenevestigatorQ5T7N8.

Family and domain databases

ProtoNetSearch...

Other

PROQ5T7N8.

Entry information

Entry nameF27D1_HUMAN
AccessionPrimary (citable) accession number: Q5T7N8
Secondary accession number(s): Q5VSL6
Entry history
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: January 22, 2014
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

Human chromosome 9

Human chromosome 9: entries, gene names and cross-references to MIM