Q5T7B8 (KIF24_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 85.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Kinesin-like protein KIF24 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1368 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Microtubule-dependent motor protein that acts as a negative regulator of ciliogenesis by mediating recruitment of CCP110 to mother centriole in cycling cells, leading to restrict nucleation of cilia at centrioles. Mediates depolymerization of microtubules of centriolar origin, possibly to suppress abberrant cilia formation. Ref.6 |
| Subunit structure | Interacts with CCP110 and CEP97. Ref.6 |
| Subcellular location | Cytoplasm › cytoskeleton › centrosome › centriole. Note: Primarily localizes to the mother centriole/basal body and is either absent at daughter centriole. Ref.6 |
| Developmental stage | Increases as cells progress through G1, peaks during S and G2 phases and decreases as cells enter mitosis during G2/M (at protein level). Ref.6 |
| Sequence similarities | Belongs to the kinesin-like protein family. Contains 1 kinesin-motor domain. Contains 1 SAM (sterile alpha motif) domain. |
| Sequence caution | The sequence AAI10504.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAC86074.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAC86329.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence CAI15917.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cilium biogenesis/degradation |
| Cellular component | Cytoplasm Cytoskeleton Microtubule |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Motor protein |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | cilium assembly Inferred from mutant phenotype Ref.6. Source: UniProtKB microtubule depolymerizationInferred from direct assay Ref.6. Source: UniProtKB microtubule-based movementInferred from electronic annotation. Source: InterPro |
| Cellular_component | centriole Inferred from direct assay Ref.6. Source: UniProtKB microtubuleInferred from electronic annotation. Source: UniProtKB-KW microtubule associated complexInferred from electronic annotation. Source: InterPro |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW microtubule motor activityInferred from direct assay Ref.6. Source: UniProtKB |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| CCP110 | O43303 | 9 | EBI-2556811,EBI-1566217 | |
| CEP97 | Q8IW35 | 9 | EBI-2556811,EBI-1566210 |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q5T7B8-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q5T7B8-2) The sequence of this isoform differs from the canonical sequence as follows: 272-405: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q5T7B8-3) The sequence of this isoform differs from the canonical sequence as follows: 209-1368: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q5T7B8-4) The sequence of this isoform differs from the canonical sequence as follows: 1131-1158: SPSPIRQHPADKLPSREADLGEACQSRE → GPGEKTSYKAWLAGVWFVHRPHQVALQQ 1159-1368: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1368 | 1368 | Kinesin-like protein KIF24 | PRO_0000278248 | |||||
Regions | |||||||||
| Domain | 1 – 64 | 64 | SAM | ||||||
| Domain | 220 – 477 | 258 | Kinesin-motor | ||||||
| Nucleotide binding | 313 – 320 | 8 | ATP Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 102 | 1 | Phosphoserine Ref.4 | ||||||
| Modified residue | 112 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 478 | 1 | Phosphoserine Ref.4 Ref.5 | ||||||
| Modified residue | 646 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 1012 | 1 | Phosphoserine Ref.4 | ||||||
Natural variations | |||||||||
| Alternative sequence | 209 – 1368 | 1160 | Missing in isoform 3. | VSP_023211 | |||||
| Alternative sequence | 272 – 405 | 134 | Missing in isoform 2. | VSP_023210 | |||||
| Alternative sequence | 1131 – 1158 | 28 | SPSPI…CQSRE → GPGEKTSYKAWLAGVWFVHR PHQVALQQ in isoform 4. | VSP_023212 | |||||
| Alternative sequence | 1159 – 1368 | 210 | Missing in isoform 4. | VSP_023213 | |||||
| Natural variant | 50 | 1 | D → E. Corresponds to variant rs16935508 [ dbSNP | Ensembl ]. | VAR_030720 | |||||
| Natural variant | 109 | 1 | R → G. Corresponds to variant rs41274845 [ dbSNP | Ensembl ]. | VAR_061284 | |||||
| Natural variant | 140 | 1 | M → V. Corresponds to variant rs10972048 [ dbSNP | Ensembl ]. | VAR_030721 | |||||
| Natural variant | 218 | 1 | W → L. Corresponds to variant rs17350674 [ dbSNP | Ensembl ]. | VAR_049706 | |||||
| Natural variant | 837 | 1 | S → F. Ref.2 Ref.3 Corresponds to variant rs41274041 [ dbSNP | Ensembl ]. | VAR_061285 | |||||
| Natural variant | 1077 | 1 | T → K. Corresponds to variant rs34101674 [ dbSNP | Ensembl ]. | VAR_049707 | |||||
Experimental info | |||||||||
| Mutagenesis | 263 – 264 | 2 | VD → AA: Impairs ability to suppress cilia formation. | ||||||
| Mutagenesis | 483 – 485 | 3 | KEC → AAA: Impairs ability to suppress cilia formation. Ref.6 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 503-1368 (ISOFORM 1), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 32-1368 (ISOFORM 3), VARIANT PHE-837. Tissue: Fetal brain, Ovarian carcinoma and Testis. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 509-1368 (ISOFORM 1), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 956-1368 (ISOFORM 4), VARIANT PHE-837. Tissue: Duodenum. |
| [4] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102; SER-478 AND SER-1012, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [5] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-112; SER-478 AND SER-646, MASS SPECTROMETRY. |
| [6] | "Centriolar kinesin Kif24 interacts with CP110 to remodel microtubules and regulate ciliogenesis." Kobayashi T., Tsang W.Y., Li J., Lane W., Dynlacht B.D. Cell 145:914-925(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE, INTERACTION WITH CCP110 AND CEP97, MUTAGENESIS OF 263-VAL-ASP-264 AND 483-LYS--CYS-485. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AL353662 Genomic DNA. Translation: CAI15917.1. Sequence problems. AL353662 Genomic DNA. Translation: CAI15919.1. AL353662 Genomic DNA. Translation: CAI15920.3. AK001795 mRNA. No translation available. AK125180 mRNA. Translation: BAC86074.1. Different initiation. AK125872 mRNA. Translation: BAC86329.1. Different initiation. BC048311 mRNA. Translation: AAH48311.1. BC110502 mRNA. Translation: AAI10503.2. BC110503 mRNA. Translation: AAI10504.1. Different initiation. |
| IPI | IPI00419014. IPI00828028. IPI00828144. IPI00847428. |
| RefSeq | NP_919289.2. NM_194313.2. |
| UniGene | Hs.710246. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1V8J based on UniProtKB Q922S8. |
| ProteinModelPortal | Q5T7B8. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q5T7B8. 5 interactions. |
| STRING | 9606.ENSP00000368464. |
PTM databases | |
| PhosphoSite | Q5T7B8. |
Polymorphism databases | |
| DMDM | 126215732. |
Proteomic databases | |
| PaxDb | Q5T7B8. |
| PRIDE | Q5T7B8. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000345050; ENSP00000340179; ENSG00000186638. ENST00000379166; ENSP00000368464; ENSG00000186638. ENST00000379174; ENSP00000368472; ENSG00000186638. ENST00000402558; ENSP00000384433; ENSG00000186638. |
| GeneID | 347240. |
| KEGG | hsa:347240. |
| UCSC | uc003zua.4. human. |
Organism-specific databases | |
| CTD | 347240. |
| GeneCards | GC09M034252. |
| H-InvDB | HIX0025726. |
| HGNC | HGNC:19916. KIF24. |
| HPA | HPA020643. |
| MIM | 613747. gene. |
| neXtProt | NX_Q5T7B8. |
| PharmGKB | PA142671589. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5059. |
| HOVERGEN | HBG080392. |
| InParanoid | Q5T7B8. |
| KO | K10393. |
| OMA | QKLKYQP. |
| OrthoDB | EOG4SJ5CZ. |
Gene expression databases | |
| Bgee | Q5T7B8. |
| CleanEx | HS_KIF24. |
| Genevestigator | Q5T7B8. |
Family and domain databases | |
| Gene3D | 1.10.150.50. 1 hit. 3.40.850.10. 1 hit. |
| InterPro | IPR019821. Kinesin_motor_CS. IPR001752. Kinesin_motor_dom. IPR001660. SAM. IPR013761. SAM/pointed. IPR021129. SAM_type1. [Graphical view] |
| Pfam | PF00225. Kinesin. 1 hit. PF00536. SAM_1. 1 hit. [Graphical view] |
| PRINTS | PR00380. KINESINHEAVY. |
| SMART | SM00129. KISc. 1 hit. [Graphical view] |
| SUPFAM | SSF47769. SAM_homology. 1 hit. |
| PROSITE | PS00411. KINESIN_MOTOR_DOMAIN1. 1 hit. PS50067. KINESIN_MOTOR_DOMAIN2. 1 hit. PS50105. SAM_DOMAIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 347240. |
| NextBio | 99066. |
| SOURCE | Search... |
Entry information
| Entry name | KIF24_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q5T7B8 Secondary accession number(s): Q2TB93 Q9NV43 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
