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Protein
Submitted name:

High mobility group AT-hook 1

Gene

HMGA1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group AT-hook 1Imported
Gene namesi
Name:HMGA1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA35094.

Expressioni

Gene expression databases

BgeeiENSG00000137309.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000076308.
HOVERGENiHBG097343.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR031079. HMGA1_mammal.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PANTHERiPTHR23341:SF1. PTHR23341:SF1. 1 hit.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5T6U8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSESSSKSSQ PLASKQEKDG TEKRGRGRPR KQPPKEPSEV PTPKRPRGRP
60 70 80 90
KGSKNKGAAK TRKTTTTPGR KPRGRPKKLE KEEEEGISQE SSEEEQ
Length:96
Mass (Da):10,679
Last modified:May 10, 2005 - v1
Checksum:iB82DCAA29E6D18FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC015789 mRNA. Translation: AAH15789.1.
BT006774 mRNA. Translation: AAP35420.1.
RefSeqiNP_001306006.1. NM_001319077.1.
NP_002122.1. NM_002131.3.
NP_665909.1. NM_145902.2.
NP_665910.1. NM_145903.2.
NP_665912.1. NM_145905.2.
UniGeneiHs.518805.
Hs.696527.
Hs.703764.

Genome annotation databases

GeneIDi3159.
UCSCiuc003oiv.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC015789 mRNA. Translation: AAH15789.1.
BT006774 mRNA. Translation: AAP35420.1.
RefSeqiNP_001306006.1. NM_001319077.1.
NP_002122.1. NM_002131.3.
NP_665909.1. NM_145902.2.
NP_665910.1. NM_145903.2.
NP_665912.1. NM_145905.2.
UniGeneiHs.518805.
Hs.696527.
Hs.703764.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi3159.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3159.
UCSCiuc003oiv.4. human.

Organism-specific databases

CTDi3159.
PharmGKBiPA35094.

Phylogenomic databases

HOGENOMiHOG000076308.
HOVERGENiHBG097343.

Miscellaneous databases

ChiTaRSiHMGA1. human.
GenomeRNAii3159.

Gene expression databases

BgeeiENSG00000137309.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR031079. HMGA1_mammal.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PANTHERiPTHR23341:SF1. PTHR23341:SF1. 1 hit.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5T6U8_HUMAN
AccessioniPrimary (citable) accession number: Q5T6U8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.