Q5T6N4 (Q5T6N4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Actin-binding LIM protein 1 Ensembl ENSP00000277895

Gene names

Name:

ABLIM1 Ensembl ENSP00000277895

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000277895

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	846 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000277895

Ontologies

Keywords
Domain	LIM domain SAAS SAAS001781
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cytoskeleton organization Inferred from electronic annotation. Source: InterPro
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5T6N4 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: EA300E3C7DBD4DCE	FASTA	846	95,527
	10 20 30 40 50 60 MPAFLGLKCL GKLCSSEKSK VTSSERTSAR GSNRKRLIVE DRRVSGTSFT AHRRATITHL 70 80 90 100 110 120 LYLCPKDYCP RGRVCNSVDP FVAHPQDPHH PSEKPVIHCH KCGEPCKGEV LRVQTKHFHI 130 140 150 160 170 180 KCFTCKVCGC DLAQGGFFIK NGEYLCTLDY QRMYGTRCHG CGEFVEGEVV TALGKTYHPN 190 200 210 220 230 240 CFACTICKRP FPPGDRVTFN GRDCLCQLCA QPMSSSPKET TFSSNCAGCG RDIKNGQALL 250 260 270 280 290 300 ALDKQWHLGC FKCKSCGKVL TGEYISKDGA PYCEKDYQGL FGVKCEACHQ FITGKVLEAG 310 320 330 340 350 360 DKHYHPSCAR CSRCNQMFTE GEEMYLQGST VWHPDCKQST KTEEKLRLPN IRRSSSDFFY 370 380 390 400 410 420 SKSLIRRTGR SPSLQPTRTS SESIYSRPGS SIPGSPGHTI YAKVDNEILD YKDLAAIPKV 430 440 450 460 470 480 KAIYDIERPD LITYEPFYTS GYDDKQERQS LGESPRTLSP TPSAEGYQDV RDRMIHRSTS 490 500 510 520 530 540 QGSINSPVYS RHSYTPTTSR SPQHFHRPEL LSPGVQRLSY LRTSSLSPTH SDSRPNPPFR 550 560 570 580 590 600 HHFIPHIKGN EPSSGRNSPL PYRPDSRPLT PTYAQAPKHF HVPDQGINIY RKPPIYKQHA 610 620 630 640 650 660 ALAAQSKSSE DIIKFSKFPA AQAPDPSETP KIETDHWPGP PSFAVVGPDM KRRSSGREED 670 680 690 700 710 720 DEELLRRRQL QEEQLMKLNS GLGQLILKEE MEKESRERSS LLASRYDSPI NSASHIPSSK 730 740 750 760 770 780 TASLPGYGRN GLHRPVSTDF AQYNSYGDVS GGVRDYQTLP DGHMPAMRMD RGVSMPNMLE 790 800 810 820 830 840 PKIFPYEMLM VTNRGRNKIL REVDRTRLER HLAPEVFREI FGMSIQEFDR LPLWRRNDMK KKAKLF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J. Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL133384 Genomic DNA. No translation available. AL354873 Genomic DNA. No translation available. AL590109 Genomic DNA. No translation available.
IPI	IPI00515115.
UniGene	Hs.438236. Hs.538331.
3D structure databases
ProteinModelPortal	Q5T6N4.
SMR	Q5T6N4. Positions 16-344, 782-846.
ModBase	Search...
Proteomic databases
PRIDE	Q5T6N4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000277895; ENSP00000277895; ENSG00000099204.
Organism-specific databases
HGNC	HGNC:78. ABLIM1.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	HOG000285997.
HOVERGEN	HBG031499.
OMA	HHPSEKP.
Gene expression databases
ArrayExpress	Q5T6N4.
Family and domain databases
Gene3D	1.10.950.10. 1 hit. 2.10.110.10. 4 hits.
InterPro	IPR003128. Villin_headpiece. IPR001781. Znf_LIM. [Graphical view]
Pfam	PF00412. LIM. 4 hits. PF02209. VHP. 1 hit. [Graphical view]
SMART	SM00132. LIM. 4 hits. SM00153. VHP. 1 hit. [Graphical view]
SUPFAM	SSF47050. VHP. 1 hit.
PROSITE	PS51089. HP. 1 hit. PS00478. LIM_DOMAIN_1. 4 hits. PS50023. LIM_DOMAIN_2. 4 hits. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	ABLIM1. human.
NextBio	35539780.

Entry information

Entry name

Q5T6N4_HUMAN

Accession

Primary (citable) accession number: Q5T6N4

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	May 1, 2013
This is version 72 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.