Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q5T6N4 (Q5T6N4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length846 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 4 LIM zinc-binding domains. RuleBase RU000350

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000277895

Ontologies

Keywords
   DomainLIM domain SAAS SAAS001781 RuleBase RU000350
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcytoskeleton organization

Inferred from electronic annotation. Source: InterPro

   Molecular_functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5T6N4 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: EA300E3C7DBD4DCE

FASTA84695,527
        10         20         30         40         50         60 
MPAFLGLKCL GKLCSSEKSK VTSSERTSAR GSNRKRLIVE DRRVSGTSFT AHRRATITHL 

        70         80         90        100        110        120 
LYLCPKDYCP RGRVCNSVDP FVAHPQDPHH PSEKPVIHCH KCGEPCKGEV LRVQTKHFHI 

       130        140        150        160        170        180 
KCFTCKVCGC DLAQGGFFIK NGEYLCTLDY QRMYGTRCHG CGEFVEGEVV TALGKTYHPN 

       190        200        210        220        230        240 
CFACTICKRP FPPGDRVTFN GRDCLCQLCA QPMSSSPKET TFSSNCAGCG RDIKNGQALL 

       250        260        270        280        290        300 
ALDKQWHLGC FKCKSCGKVL TGEYISKDGA PYCEKDYQGL FGVKCEACHQ FITGKVLEAG 

       310        320        330        340        350        360 
DKHYHPSCAR CSRCNQMFTE GEEMYLQGST VWHPDCKQST KTEEKLRLPN IRRSSSDFFY 

       370        380        390        400        410        420 
SKSLIRRTGR SPSLQPTRTS SESIYSRPGS SIPGSPGHTI YAKVDNEILD YKDLAAIPKV 

       430        440        450        460        470        480 
KAIYDIERPD LITYEPFYTS GYDDKQERQS LGESPRTLSP TPSAEGYQDV RDRMIHRSTS 

       490        500        510        520        530        540 
QGSINSPVYS RHSYTPTTSR SPQHFHRPEL LSPGVQRLSY LRTSSLSPTH SDSRPNPPFR 

       550        560        570        580        590        600 
HHFIPHIKGN EPSSGRNSPL PYRPDSRPLT PTYAQAPKHF HVPDQGINIY RKPPIYKQHA 

       610        620        630        640        650        660 
ALAAQSKSSE DIIKFSKFPA AQAPDPSETP KIETDHWPGP PSFAVVGPDM KRRSSGREED 

       670        680        690        700        710        720 
DEELLRRRQL QEEQLMKLNS GLGQLILKEE MEKESRERSS LLASRYDSPI NSASHIPSSK 

       730        740        750        760        770        780 
TASLPGYGRN GLHRPVSTDF AQYNSYGDVS GGVRDYQTLP DGHMPAMRMD RGVSMPNMLE 

       790        800        810        820        830        840 
PKIFPYEMLM VTNRGRNKIL REVDRTRLER HLAPEVFREI FGMSIQEFDR LPLWRRNDMK 


KKAKLF 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and comparative analysis of human chromosome 10."
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. expand/collapse author list , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL133384 Genomic DNA. No translation available.
AL354873 Genomic DNA. No translation available.
AL590109 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalQ5T6N4.
SMRQ5T6N4. Positions 17-344, 782-846.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ5T6N4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000277895; ENSP00000277895; ENSG00000099204.

Organism-specific databases

HGNCHGNC:78. ABLIM1.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000285997.
HOVERGENHBG031499.
OMAHHPSEKP.

Family and domain databases

Gene3D1.10.950.10. 1 hit.
2.10.110.10. 4 hits.
InterProIPR003128. Villin_headpiece.
IPR001781. Znf_LIM.
[Graphical view]
PfamPF00412. LIM. 4 hits.
PF02209. VHP. 1 hit.
[Graphical view]
SMARTSM00132. LIM. 4 hits.
SM00153. VHP. 1 hit.
[Graphical view]
SUPFAMSSF47050. SSF47050. 1 hit.
PROSITEPS51089. HP. 1 hit.
PS00478. LIM_DOMAIN_1. 4 hits.
PS50023. LIM_DOMAIN_2. 4 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSABLIM1. human.
NextBio35539780.

Entry information

Entry nameQ5T6N4_HUMAN
AccessionPrimary (citable) accession number: Q5T6N4
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: February 19, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.