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Q5T6N2 (Q5T6N2_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length688 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 4 LIM zinc-binding domains. RuleBase RU000350

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000358260

Ontologies

Keywords
   DomainLIM domain RuleBase RU000350 SAAS SAAS001781
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5T6N2 [UniParc].

Last modified June 26, 2013. Version 2.
Checksum: F878BED793BCB981

FASTA68877,160
        10         20         30         40         50         60 
MLMTLEMTEL TDPHHTMGDY KVAHPQDPHH PSEKPVIHCH KCGEPCKGEV LRVQTKHFHI 

        70         80         90        100        110        120 
KCFTCKVCGC DLAQGGFFIK NGEYLCTLDY QRMYGTRCHG CGEFVEGEVV TALGKTYHPN 

       130        140        150        160        170        180 
CFACTICKRP FPPGDRVTFN GRDCLCQLCA QPMSSSPKET TFSSNCAGCG RDIKNGQALL 

       190        200        210        220        230        240 
ALDKQWHLGC FKCKSCGKVL TGEYISKDGA PYCEKDYQGL FGVKCEACHQ FITGKVLEAG 

       250        260        270        280        290        300 
DKHYHPSCAR CSRCNQMFTE GEEMYLQGST VWHPDCKQST KTEEKLRLPN IRRSSSDFFY 

       310        320        330        340        350        360 
SKSLIRRTGR SPSLQPTRTS SESIYSRPGS SIPGSPGHTI YAKVDNEILD YKDLAAIPKV 

       370        380        390        400        410        420 
KAIYDIERPD LITYEPFYTS GYDDKQERQS LGESPRTLSP TPSAEGYQDV RDRMIHRSTS 

       430        440        450        460        470        480 
QGSINSPVYS RHSYTPTTSR SPQHFHRPGN EPSSGRNSPL PYRPDSRPLT PTYAQAPKHF 

       490        500        510        520        530        540 
HVPDQGINIY RKPPIYKQHD AAALAAQSKS SEDIIKFSKF PAAQAPDPSE TPKIETDHWP 

       550        560        570        580        590        600 
GPPSFAVVGP DMKRRSSGRE EDDEELLRRR QLQEEQLMKL NSGLGQLILK EEMEKESRER 

       610        620        630        640        650        660 
SSLLASRYDS PINSASHIPS SKTASLPGYG RNGLHRPVST DFAQYNSYGD VSGGVRDYQT 

       670        680 
LPDGHMPAMR MDRGVSMPNM LEPKIFPY 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and comparative analysis of human chromosome 10."
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. expand/collapse author list , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (MAY-2013) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL133384 Genomic DNA. No translation available.
AL354873 Genomic DNA. No translation available.
AL590109 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalQ5T6N2.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ5T6N2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000369256; ENSP00000358260; ENSG00000099204.

Organism-specific databases

HGNCHGNC:78. ABLIM1.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000285997.
HOVERGENHBG031499.

Family and domain databases

Gene3D2.10.110.10. 4 hits.
InterProIPR001781. Znf_LIM.
[Graphical view]
PfamPF00412. LIM. 4 hits.
[Graphical view]
SMARTSM00132. LIM. 4 hits.
[Graphical view]
PROSITEPS00478. LIM_DOMAIN_1. 4 hits.
PS50023. LIM_DOMAIN_2. 4 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSABLIM1. human.

Entry information

Entry nameQ5T6N2_HUMAN
AccessionPrimary (citable) accession number: Q5T6N2
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: June 26, 2013
Last modified: February 19, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.