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Q5T5W8

- SI11L_HUMAN

UniProt

Q5T5W8 - SI11L_HUMAN

Protein

Putative small integral membrane protein 11-like

Gene

SMIM11P1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative small integral membrane protein 11-like
    Alternative name(s):
    Small integral membrane protein 11 pseudogene 1
    Gene namesi
    Name:SMIM11P1
    Synonyms:C6orf161, FAM165A
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 6

    Organism-specific databases

    HGNCiHGNC:21400. SMIM11P1.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 5858Putative small integral membrane protein 11-likePRO_0000341293Add
    BLAST

    Proteomic databases

    PaxDbiQ5T5W8.
    PRIDEiQ5T5W8.

    PTM databases

    PhosphoSiteiQ5T5W8.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5T5W8.

    Organism-specific databases

    HPAiHPA051321.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5T5W8.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei10 – 3223HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili29 – 5830Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the SMIM11 family.Curated

    Keywords - Domaini

    Coiled coil, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG71913.
    HOGENOMiHOG000060330.
    HOVERGENiHBG107872.
    InParanoidiQ5T5W8.
    OrthoDBiEOG715Q7C.
    PhylomeDBiQ5T5W8.
    TreeFamiTF330784.

    Family and domain databases

    InterProiIPR028023. FAM165.
    [Graphical view]
    PfamiPF14981. FAM165. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5T5W8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNWKVLEHVH LLLYILAAKT LILCLAFAGV KIYQRKRLEA KQQKLEAERK   50
    KQSEKKDN 58
    Length:58
    Mass (Da):6,878
    Last modified:December 21, 2004 - v1
    Checksum:i9FC3B50D696E5854
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL355615 Genomic DNA. Translation: CAI13514.1.

    Genome annotation databases

    EnsembliENST00000369586; ENSP00000358599; ENSG00000198738.

    Polymorphism databases

    DMDMi74745137.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL355615 Genomic DNA. Translation: CAI13514.1 .

    3D structure databases

    ProteinModelPortali Q5T5W8.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q5T5W8.

    Polymorphism databases

    DMDMi 74745137.

    Proteomic databases

    PaxDbi Q5T5W8.
    PRIDEi Q5T5W8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000369586 ; ENSP00000358599 ; ENSG00000198738 .

    Organism-specific databases

    GeneCardsi GC06M086468.
    HGNCi HGNC:21400. SMIM11P1.
    HPAi HPA051321.
    neXtProti NX_Q5T5W8.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG71913.
    HOGENOMi HOG000060330.
    HOVERGENi HBG107872.
    InParanoidi Q5T5W8.
    OrthoDBi EOG715Q7C.
    PhylomeDBi Q5T5W8.
    TreeFami TF330784.

    Miscellaneous databases

    NextBioi 21544809.

    Gene expression databases

    Genevestigatori Q5T5W8.

    Family and domain databases

    InterProi IPR028023. FAM165.
    [Graphical view ]
    Pfami PF14981. FAM165. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and analysis of human chromosome 6."
      Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
      Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiSI11L_HUMAN
    AccessioniPrimary (citable) accession number: Q5T5W8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 10, 2008
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene. There is no evidence of the expression of the gene for this putative protein.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 6
      Human chromosome 6: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3