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Q5T200

- ZC3HD_HUMAN

UniProt

Q5T200 - ZC3HD_HUMAN

Protein

Zinc finger CCCH domain-containing protein 13

Gene

ZC3H13

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri36 – 6429C3H1-typePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. poly(A) RNA binding Source: UniProtKB
    3. protein binding Source: IntAct

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Zinc finger CCCH domain-containing protein 13
    Gene namesi
    Name:ZC3H13
    Synonyms:KIAA0853
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 13

    Organism-specific databases

    HGNCiHGNC:20368. ZC3H13.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA134907656.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 16681668Zinc finger CCCH domain-containing protein 13PRO_0000050778Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei64 – 641Phosphoserine1 Publication
    Modified residuei198 – 1981Phosphoserine3 Publications
    Modified residuei207 – 2071Phosphoserine2 Publications
    Modified residuei209 – 2091Phosphoserine2 Publications
    Modified residuei237 – 2371Phosphothreonine1 Publication
    Modified residuei242 – 2421Phosphoserine5 Publications
    Modified residuei263 – 2631Phosphothreonine6 Publications
    Modified residuei265 – 2651Phosphoserine6 Publications
    Modified residuei316 – 3161Phosphoserine1 Publication
    Modified residuei318 – 3181Phosphoserine1 Publication
    Modified residuei325 – 3251Phosphoserine2 Publications
    Modified residuei328 – 3281Phosphoserine1 Publication
    Modified residuei354 – 3541Phosphothreonine1 Publication
    Modified residuei364 – 3641Phosphothreonine1 Publication
    Modified residuei370 – 3701Phosphoserine3 Publications
    Modified residuei372 – 3721Phosphoserine3 Publications
    Modified residuei381 – 3811Phosphoserine3 Publications
    Modified residuei831 – 8311Phosphoserine1 Publication
    Modified residuei833 – 8331Phosphoserine1 Publication
    Modified residuei837 – 8371Phosphoserine1 Publication
    Modified residuei845 – 8451Phosphoserine3 Publications
    Modified residuei848 – 8481Phosphoserine3 Publications
    Modified residuei853 – 8531Phosphoserine3 Publications
    Modified residuei875 – 8751Phosphoserine1 Publication
    Modified residuei877 – 8771Phosphoserine3 Publications
    Modified residuei882 – 8821Phosphothreonine1 Publication
    Modified residuei986 – 9861Phosphoserine3 Publications
    Modified residuei993 – 9931Phosphoserine5 Publications
    Modified residuei1010 – 10101Phosphoserine3 Publications
    Modified residuei1014 – 10141Phosphoserine3 Publications
    Modified residuei1017 – 10171Phosphoserine4 Publications
    Modified residuei1170 – 11701Phosphothreonine1 Publication
    Modified residuei1191 – 11911Phosphoserine1 Publication
    Modified residuei1194 – 11941Phosphoserine1 Publication
    Modified residuei1208 – 12081Phosphoserine2 Publications
    Modified residuei1210 – 12101Phosphoserine1 Publication
    Modified residuei1230 – 12301Phosphoserine1 Publication
    Modified residuei1364 – 13641Phosphoserine1 Publication
    Modified residuei1366 – 13661Phosphoserine1 Publication
    Modified residuei1382 – 13821Phosphoserine1 Publication
    Modified residuei1438 – 14381Phosphoserine1 Publication
    Modified residuei1465 – 14651Phosphoserine1 Publication

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    MaxQBiQ5T200.
    PaxDbiQ5T200.
    PRIDEiQ5T200.

    PTM databases

    PhosphoSiteiQ5T200.

    Miscellaneous databases

    PMAP-CutDBQ5T200.

    Expressioni

    Gene expression databases

    ArrayExpressiQ5T200.
    BgeeiQ5T200.
    CleanExiHS_ZC3H13.
    GenevestigatoriQ5T200.

    Organism-specific databases

    HPAiHPA039340.
    HPA040140.
    HPA047806.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    SCHIP1Q9P0W52EBI-2679720,EBI-1397509

    Protein-protein interaction databases

    BioGridi116719. 43 interactions.
    IntActiQ5T200. 7 interactions.
    MINTiMINT-3306871.
    STRINGi9606.ENSP00000282007.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5T200.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili645 – 789145Sequence AnalysisAdd
    BLAST
    Coiled coili1300 – 136667Sequence AnalysisAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi204 – 24239Ser-richAdd
    BLAST
    Compositional biasi316 – 34934Ser-richAdd
    BLAST
    Compositional biasi350 – 652303Arg/Ser-richAdd
    BLAST
    Compositional biasi653 – 842190Arg/Glu-richAdd
    BLAST
    Compositional biasi957 – 102872Lys-richAdd
    BLAST
    Compositional biasi1189 – 1295107Ser-richAdd
    BLAST

    Sequence similaritiesi

    Contains 1 C3H1-type zinc finger.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri36 – 6429C3H1-typePROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Coiled coil, Repeat, Zinc-finger

    Phylogenomic databases

    eggNOGiNOG301709.
    HOVERGENiHBG107115.
    InParanoidiQ5T200.
    OMAiSYQRTIT.
    OrthoDBiEOG7DC23Q.
    PhylomeDBiQ5T200.
    TreeFamiTF332670.

    Family and domain databases

    Gene3Di4.10.1000.10. 1 hit.
    InterProiIPR000571. Znf_CCCH.
    [Graphical view]
    PfamiPF00642. zf-CCCH. 1 hit.
    [Graphical view]
    SMARTiSM00356. ZnF_C3H1. 1 hit.
    [Graphical view]
    PROSITEiPS50103. ZF_C3H1. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q5T200-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MSKIRRKVTV ENTKTISDST SRRPSVFERL GPSTGSTAET QCRNWLKTGN     50
    CLYGNTCRFV HGPSPRGKGY SSNYRRSPER PTGDLRERMK NKRQDVDTEP 100
    QKRNTEESSS PVRKESSRGR HREKEDIKIT KERTPESEEE NVEWETNRDD 150
    SDNGDINYDY VHELSLEMKR QKIQRELMKL EQENMEKREE IIIKKEVSPE 200
    VVRSKLSPSP SLRKSSKSPK RKSSPKSSSA SKKDRKTSAV SSPLLDQQRN 250
    SKTNQSKKKG PRTPSPPPPI PEDIALGKKY KEKYKVKDRI EEKTRDGKDR 300
    GRDFERQREK RDKPRSTSPA GQHHSPISSR HHSSSSQSGS SIQRHSPSPR 350
    RKRTPSPSYQ RTLTPPLRRS ASPYPSHSLS SPQRKQSPPR HRSPMREKGR 400
    HDHERTSQSH DRRHERREDT RGKRDREKDS REEREYEQDQ SSSRDHRDDR 450
    EPRDGRDRRD ARDTRDRREL RDSRDMRDSR EMRDYSRDTK ESRDPRDSRS 500
    TRDAHDYRDR EGRDTHRKED TYPEESRSYG RNHLREESSR TEIRNESRNE 550
    SRSEIRNDRM GRSRGRVPEL PEKGSRGSRG SQIDSHSSNS NYHDSWETRS 600
    SYPERDRYPE RDNRDQARDS SFERRHGERD RRDNRERDQR PSSPIRHQGR 650
    NDELERDERR EERRVDRVDD RRDERARERD RERERDRERE RERERERDRE 700
    REKERELERE RARERERERE KERDRERDRD RDHDRERERE RERDREKERE 750
    REREERERER ERERERERER ERERERARER DKERERQRDW EDKDKGRDDR 800
    REKREEIRED RNPRDGHDER KSKKRYRNEG SPSPRQSPKR RREHSPDSDA 850
    YNSGDDKNEK HRLLSQVVRP QESRSLSPSH LTEDRQGRWK EEDRKPERKE 900
    SSRRYEEQEL KEKVSSVDKQ REQTEILESS RMRAQDIIGH HQSEDRETSD 950
    RAHDENKKKA KIQKKPIKKK KEDDVGIERG NIETTSEDGQ VFSPKKGQKK 1000
    KSIEKKRKKS KGDSDISDEE AAQQSKKKRG PRTPPITTKE ELVEMCNGKN 1050
    GILEDSQKKE DTAFSDWSDE DVPDRTEVTE AEHTATATTP GSTPSPLSSL 1100
    LPPPPPVATA TATTVPATLA ATTAAAATSF STSAITISTS ATPTNTTNNT 1150
    FANEDSHRKC HRTRVEKVET PHVTIEDAQH RKPMDQKRSS SLGSNRSNRS 1200
    HTSGRLRSPS NDSAHRSGDD QSGRKRVLHS GSRDREKTKS LEITGERKSR 1250
    IDQLKRGEPS RSTSSDRQDS RSHSSRRSSP ESDRQVHSRS GSFDSRDRLQ 1300
    ERDRYEHDRE RERERRDTRQ REWDRDADKD WPRNRDRDRL RERERERERD 1350
    KRRDLDRERE RLISDSVERD RDRDRDRTFE SSQIESVKRC EAKLEGEHER 1400
    DLESTSRDSL ALDKERMDKD LGSVQGFEET NKSERTESLE GDDESKLDDA 1450
    HSLGSGAGEG YEPISDDELD EILAGDAEKR EDQQDEEKMP DPLDVIDVDW 1500
    SGLMPKHPKE PREPGAALLK FTPGAVMLRV GISKKLAGSE LFAKVKETCQ 1550
    RLLEKPKDAD NLFEHELGAL NMAALLRKEE RASLLSNLGP CCKALCFRRD 1600
    SAIRKQLVKN EKGTIKQAYT SAPMVDNELL RLSLRLFKRK TTCHAPGHEK 1650
    TEDNKLSQSS IQQELCVS 1668

    Note: Gene prediction confirmed by EST data.

    Length:1,668
    Mass (Da):196,635
    Last modified:December 21, 2004 - v1
    Checksum:iB7E8118D3B5954D6
    GO
    Isoform 2 (identifier: Q5T200-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1440-1440: E → EA
         1558-1563: DADNLF → GSFILL
         1564-1668: Missing.

    Note: Contains a phosphoserine at position 1453. Contains a phosphoserine at position 1456. Contains a phosphoserine at position 1466.

    Show »
    Length:1,564
    Mass (Da):184,869
    Checksum:iEDF7A3EA9DB7448B
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti702 – 7043EKE → KAR in BAA74876. (PubMed:10048485)Curated
    Sequence conflicti967 – 9671I → K in CAD38544. (PubMed:17974005)Curated

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti1429 – 14291E → D.4 Publications
    Corresponds to variant rs9534264 [ dbSNP | Ensembl ].
    VAR_022727

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei1440 – 14401E → EA in isoform 2. 2 PublicationsVSP_027202
    Alternative sequencei1558 – 15636DADNLF → GSFILL in isoform 2. 2 PublicationsVSP_014252
    Alternative sequencei1564 – 1668105Missing in isoform 2. 2 PublicationsVSP_014253Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY283618 mRNA. Translation: AAP37483.1.
    AL157758, AL445232 Genomic DNA. Translation: CAI10903.1.
    AL157758, AL445232 Genomic DNA. Translation: CAM13064.1.
    AL445232, AL157758 Genomic DNA. Translation: CAI16505.1.
    AL445232, AL157758 Genomic DNA. Translation: CAI16506.2.
    AL831833 mRNA. Translation: CAD38544.1.
    AL136745 mRNA. Translation: CAB66679.2.
    AB020660 mRNA. Translation: BAA74876.1.
    CCDSiCCDS9400.1. [Q5T200-2]
    RefSeqiNP_055885.3. NM_015070.4. [Q5T200-2]
    XP_005266368.1. XM_005266311.1. [Q5T200-1]
    XP_005266369.1. XM_005266312.1. [Q5T200-2]
    UniGeneiHs.136102.

    Genome annotation databases

    EnsembliENST00000242848; ENSP00000242848; ENSG00000123200. [Q5T200-1]
    ENST00000282007; ENSP00000282007; ENSG00000123200. [Q5T200-2]
    GeneIDi23091.
    KEGGihsa:23091.
    UCSCiuc001vas.1. human. [Q5T200-2]
    uc001vat.1. human. [Q5T200-1]

    Polymorphism databases

    DMDMi68052314.

    Keywords - Coding sequence diversityi

    Alternative splicing, Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY283618 mRNA. Translation: AAP37483.1 .
    AL157758 , AL445232 Genomic DNA. Translation: CAI10903.1 .
    AL157758 , AL445232 Genomic DNA. Translation: CAM13064.1 .
    AL445232 , AL157758 Genomic DNA. Translation: CAI16505.1 .
    AL445232 , AL157758 Genomic DNA. Translation: CAI16506.2 .
    AL831833 mRNA. Translation: CAD38544.1 .
    AL136745 mRNA. Translation: CAB66679.2 .
    AB020660 mRNA. Translation: BAA74876.1 .
    CCDSi CCDS9400.1. [Q5T200-2 ]
    RefSeqi NP_055885.3. NM_015070.4. [Q5T200-2 ]
    XP_005266368.1. XM_005266311.1. [Q5T200-1 ]
    XP_005266369.1. XM_005266312.1. [Q5T200-2 ]
    UniGenei Hs.136102.

    3D structure databases

    ProteinModelPortali Q5T200.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 116719. 43 interactions.
    IntActi Q5T200. 7 interactions.
    MINTi MINT-3306871.
    STRINGi 9606.ENSP00000282007.

    PTM databases

    PhosphoSitei Q5T200.

    Polymorphism databases

    DMDMi 68052314.

    Proteomic databases

    MaxQBi Q5T200.
    PaxDbi Q5T200.
    PRIDEi Q5T200.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000242848 ; ENSP00000242848 ; ENSG00000123200 . [Q5T200-1 ]
    ENST00000282007 ; ENSP00000282007 ; ENSG00000123200 . [Q5T200-2 ]
    GeneIDi 23091.
    KEGGi hsa:23091.
    UCSCi uc001vas.1. human. [Q5T200-2 ]
    uc001vat.1. human. [Q5T200-1 ]

    Organism-specific databases

    CTDi 23091.
    GeneCardsi GC13M046528.
    H-InvDB HIX0000705.
    HIX0011294.
    HIX0039579.
    HGNCi HGNC:20368. ZC3H13.
    HPAi HPA039340.
    HPA040140.
    HPA047806.
    neXtProti NX_Q5T200.
    PharmGKBi PA134907656.
    HUGEi Search...
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG301709.
    HOVERGENi HBG107115.
    InParanoidi Q5T200.
    OMAi SYQRTIT.
    OrthoDBi EOG7DC23Q.
    PhylomeDBi Q5T200.
    TreeFami TF332670.

    Miscellaneous databases

    ChiTaRSi ZC3H13. human.
    GeneWikii ZC3H13.
    GenomeRNAii 23091.
    NextBioi 44243.
    PMAP-CutDB Q5T200.
    PROi Q5T200.

    Gene expression databases

    ArrayExpressi Q5T200.
    Bgeei Q5T200.
    CleanExi HS_ZC3H13.
    Genevestigatori Q5T200.

    Family and domain databases

    Gene3Di 4.10.1000.10. 1 hit.
    InterProi IPR000571. Znf_CCCH.
    [Graphical view ]
    Pfami PF00642. zf-CCCH. 1 hit.
    [Graphical view ]
    SMARTi SM00356. ZnF_C3H1. 1 hit.
    [Graphical view ]
    PROSITEi PS50103. ZF_C3H1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Shan Y.X., Yu L.
      Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), VARIANT ASP-1429.
    2. "The DNA sequence and analysis of human chromosome 13."
      Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
      Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 176-971, VARIANT ASP-1429.
      Tissue: Fetal brain.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 298-1668 (ISOFORM 2), VARIANT ASP-1429.
      Tissue: Testis.
    5. "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
      Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O.
      DNA Res. 5:355-364(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 702-1668 (ISOFORM 1), VARIANT ASP-1429.
      Tissue: Brain.
    6. "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry."
      Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C.
      Anal. Chem. 76:2763-2772(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-263 AND SER-265, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Leukemic T-cell.
    7. "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks."
      Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.
      Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-198; THR-263 AND SER-265, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    8. "A probability-based approach for high-throughput protein phosphorylation analysis and site localization."
      Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.
      Nat. Biotechnol. 24:1285-1292(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-242; THR-263; SER-265 AND SER-993, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    9. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1382, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Embryonic kidney.
    10. "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis."
      Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III
      J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    11. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-207; SER-209; SER-242; SER-316; SER-318; SER-325; THR-354; THR-364; SER-370; SER-372; SER-381; SER-831; SER-833; SER-837; SER-845; SER-848; SER-853; SER-875; SER-877; SER-986; SER-993; SER-1010; SER-1014 AND SER-1017, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1453; SER-1456 AND SER-1466 (ISOFORM 2), IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    12. "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
      Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
      Anal. Chem. 81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    13. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
      Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
      Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-242; THR-263; SER-265; SER-986; SER-993; SER-1014 AND SER-1017, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Leukemic T-cell.
    14. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
      Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-64; SER-198; SER-207; SER-209; SER-242; THR-263; SER-265; SER-370; SER-372; SER-381; SER-845; SER-848; SER-853; SER-877; SER-993; SER-1010; SER-1014; SER-1017; THR-1170; SER-1208; SER-1230; SER-1364; SER-1366 AND SER-1438, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    15. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
      Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
      Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-198; THR-237; SER-242; THR-263; SER-265; SER-325; SER-328; SER-370; SER-372; SER-381; SER-845; SER-848; SER-853; SER-877; THR-882; SER-986; SER-993; SER-1010; SER-1017; SER-1191; SER-1194; SER-1208; SER-1210 AND SER-1465, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiZC3HD_HUMAN
    AccessioniPrimary (citable) accession number: Q5T200
    Secondary accession number(s): A2A323
    , O94936, Q5T1Z9, Q7Z7J3, Q8NDT6, Q9H0L6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 21, 2005
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 13
      Human chromosome 13: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations
    4. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3