Q5T1M5 (FKB15_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 68.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: FK506-binding protein 15 Short name=FKBP-15 Alternative name(s): 133 kDa FK506-binding protein Short name=133 kDa FKBP Short name=FKBP-133 WASP and FKBP-like Short name=WAFL | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 1219 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May be involved in the cytoskeletal organization of neuronal growth cones. Seems to be inactive as a PPIase By similarity. Involved in the transport of early endosomes at the level of transition between microfilament-based and microtubule-based movement. Ref.10 |
| Subunit structure | Interacts with WIP and actin. Ref.10 |
| Subcellular location | Cytoplasm By similarity. Cell projection › axon By similarity. Early endosome. Note: Present in axons and neuronal growth cones By similarity. Ref.10 |
| Domain | The PPIase FKBP-type domain seems to be inactive both for FK506-binding and enzymatic activity By similarity. The central coiled-coil region is responsible for association with early endosomes. |
| Sequence similarities | Belongs to the FKBP-type PPIase family. Contains 1 PPIase FKBP-type domain. |
| Sequence caution | The sequence AAH09609.1 differs from that shown. Reason: Erroneous initiation. The sequence BAA31649.1 differs from that shown. Reason: Erroneous initiation. The sequence CAI10963.1 differs from that shown. Reason: Erroneous initiation. The sequence CAI10964.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Endocytosis Transport |
| Cellular component | Cell projection Cytoplasm Endosome |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| Ligand | Actin-binding |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | endocytosis Inferred from electronic annotation. Source: UniProtKB-KW negative regulation of phosphatase activityInferred from direct assay. Source: UniProtKB protein foldingInferred from electronic annotation. Source: InterPro |
| Cellular component | axon Inferred from electronic annotation. Source: UniProtKB-SubCell early endosomeInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | actin binding Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q5T1M5-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q5T1M5-2) The sequence of this isoform differs from the canonical sequence as follows: 629-638: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q5T1M5-3) The sequence of this isoform differs from the canonical sequence as follows: 462-472: PYAGMQAYAYP → VTFYNRINYIL 473-1219: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1219 | 1219 | FK506-binding protein 15 | PRO_0000299556 | |||||
Regions | |||||||||
| Domain | 197 – 290 | 94 | PPIase FKBP-type | ||||||
| Region | 72 – 169 | 98 | Important for function in growth cone organization By similarity | ||||||
| Coiled coil | 522 – 789 | 268 | Potential | ||||||
| Coiled coil | 818 – 878 | 61 | Potential | ||||||
| Coiled coil | 925 – 951 | 27 | Potential | ||||||
| Compositional bias | 1208 – 1216 | 9 | Poly-Asp | ||||||
Amino acid modifications | |||||||||
| Modified residue | 92 | 1 | N6-acetyllysine Ref.12 | ||||||
| Modified residue | 307 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 311 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 326 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 344 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 346 | 1 | Phosphoserine Ref.7 Ref.9 | ||||||
| Modified residue | 356 | 1 | Phosphoserine Ref.7 Ref.9 Ref.11 | ||||||
| Modified residue | 939 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 940 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 941 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 956 | 1 | Phosphoserine Ref.5 Ref.7 | ||||||
| Modified residue | 979 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 1094 | 1 | Phosphothreonine Ref.7 | ||||||
| Modified residue | 1097 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 1099 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 1114 | 1 | Phosphoserine Ref.4 Ref.7 Ref.11 | ||||||
| Modified residue | 1161 | 1 | Phosphoserine Ref.6 Ref.8 | ||||||
| Modified residue | 1162 | 1 | Phosphoserine Ref.6 Ref.7 Ref.8 Ref.9 | ||||||
| Modified residue | 1164 | 1 | Phosphoserine Ref.4 Ref.6 Ref.7 Ref.8 Ref.9 Ref.11 | ||||||
| Modified residue | 1195 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 462 – 472 | 11 | PYAGMQAYAYP → VTFYNRINYIL in isoform 3. | VSP_027756 | |||||
| Alternative sequence | 473 – 1219 | 747 | Missing in isoform 3. | VSP_027757 | |||||
| Alternative sequence | 629 – 638 | 10 | Missing in isoform 2. | VSP_027758 | |||||
| Natural variant | 106 | 1 | A → T. Corresponds to variant rs1133618 [ dbSNP | Ensembl ]. | VAR_034851 | |||||
| Natural variant | 413 | 1 | H → Q. Ref.1 Ref.3 Corresponds to variant rs10435864 [ dbSNP | Ensembl ]. | VAR_034852 | |||||
| Natural variant | 434 | 1 | L → F. Corresponds to variant rs10465129 [ dbSNP | Ensembl ]. | VAR_034853 | |||||
| Natural variant | 847 | 1 | A → S. Corresponds to variant rs1128116 [ dbSNP | Ensembl ]. | VAR_061543 | |||||
| Natural variant | 993 | 1 | P → T. Corresponds to variant rs57348436 [ dbSNP | Ensembl ]. | VAR_061544 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro." Ishikawa K., Nagase T., Suyama M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:169-176(1998) [PubMed: 9734811] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT GLN-413. Tissue: Brain. |
| [2] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed: 15164053] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 548-1219 (ISOFORM 2), VARIANT GLN-413. Tissue: Eye and Prostate. |
| [4] | "Large-scale characterization of HeLa cell nuclear phosphoproteins." Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004) [PubMed: 15302935] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1114 AND SER-1164, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [5] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-311 AND SER-956, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [6] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed: 16964243] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1161; SER-1162 AND SER-1164, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-344; SER-346; SER-356; SER-939; SER-940; SER-941; SER-956; SER-979; THR-1094; SER-1097; SER-1114; SER-1162 AND SER-1164, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography." Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J. Proteomics 8:1346-1361(2008) [PubMed: 18318008] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1161; SER-1162 AND SER-1164, MASS SPECTROMETRY. Tissue: Liver. |
| [9] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-346; SER-356; SER-1162 AND SER-1164, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [10] | "WAFL, a new protein involved in regulation of early endocytic transport at the intersection of actin and microtubule dynamics." Viklund I.-M., Aspenstroem P., Meas-Yedid V., Zhang B., Kopec J., Agren D., Schneider G., D'Amato M., Olivo-Marin J.-C., Sansonetti P., Van Nhieu G.T., Pettersson S. Exp. Cell Res. 315:1040-1052(2009) [PubMed: 19121306] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH ACTIN AND WIP. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-326; SER-356; SER-1114 AND SER-1164, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [12] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-92, MASS SPECTROMETRY. |
| [13] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB014574 mRNA. Translation: BAA31649.1. Different initiation. AL449305 Genomic DNA. Translation: CAI10963.1. Different initiation. AL449305, AL449105 Genomic DNA. Translation: CAI10964.1. Different initiation. AL449105, AL449305 Genomic DNA. Translation: CAI95402.1. BC009609 mRNA. Translation: AAH09609.1. Different initiation. BC077732 mRNA. Translation: AAH77732.1. |
| IPI | IPI00646791. IPI00853400. IPI00855962. |
| PIR | T00363. |
| RefSeq | NP_056073.1. NM_015258.1. |
| UniGene | Hs.522351. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1U79 based on UniProtKB Q9SCY2. |
| ProteinModelPortal | Q5T1M5. |
| SMR | Q5T1M5. Positions 180-289. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q5T1M5. |
PTM databases | |
| PhosphoSite | Q5T1M5. |
Polymorphism databases | |
| DMDM | 158563913. |
Proteomic databases | |
| PRIDE | Q5T1M5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000238256; ENSP00000238256; ENSG00000119321. ENST00000446284; ENSP00000416158; ENSG00000119321. |
| GeneID | 23307. |
| KEGG | hsa:23307. |
| UCSC | uc004bgs.2. human. uc004bgt.2. human. |
Organism-specific databases | |
| CTD | 23307. |
| GeneCards | GC09M115923. |
| H-InvDB | HIX0008300. HIX0153287. |
| HGNC | HGNC:23397. FKBP15. |
| HPA | HPA007979. |
| neXtProt | NX_Q5T1M5. |
| PharmGKB | PA162388608. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG12978. |
| GeneTree | ENSGT00530000064286. |
| HOGENOM | HBG447023. |
| HOVERGEN | HBG067251. |
| InParanoid | Q5T1M5. |
| OrthoDB | EOG4CNQQ8. |
Gene expression databases | |
| ArrayExpress | Q5T1M5. |
| Bgee | Q5T1M5. |
| CleanEx | HS_FKBP15. |
| Genevestigator | Q5T1M5. |
Family and domain databases | |
| InterPro | IPR001179. PPIase_FKBP_dom. [Graphical view] |
| Pfam | PF00254. FKBP_C. 1 hit. [Graphical view] |
| PROSITE | PS50059. FKBP_PPIASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 45162. |
Entry information
| Entry name | FKB15_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q5T1M5 Secondary accession number(s): Q05DK8 Q9Y4D0 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with