Q5SZI6 (Q5SZI6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Heparan sulfate proteoglycan 2 EMBL CAI12134.1

Gene names

Name:	HSPG2 EMBL CAI12134.1
ORF Names:	RP11-132G19.2-004 EMBL CAI12134.1

Organism

Homo sapiens (Human) EMBL CAI12134.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	179 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
PTM	Disulfide bond SAAS SAAS023415
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAI12134.1
	Non-terminal residue	179	1	EMBL CAI12134.1

Sequences

	Sequence		Length	Mass (Da)
	Q5SZI6 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: 6E642903577FF120	FASTA	179	19,546
	10 20 30 40 50 60 AQTPPPPPAA VAVAVTPVPQ FPRACTEAEF ACHSYNECVA LEYRCDRRPD CRDMSDELNC 70 80 90 100 110 120 EEPVLGISPT FSLLVETTSL PPRPETTIMR QPPVTHAPQP LLPGSVRPLP CGPQEAACRN 130 140 150 160 170 GHCIPRDYLC DGQEDCEDGS DELDCGPPPP CEPNEFPCGN GHCALKLWRC DGDFDCEDR

References

[1]	Almeida-King J. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL590103 Genomic DNA. Translation: CAI12134.1.
IPI	IPI00514578.
UniGene	Hs.562227.
3D structure databases
ProteinModelPortal	Q5SZI6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5SZI6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
GeneTree	ENSGT00600000084085.
Gene expression databases
ArrayExpress	Q5SZI6.
Bgee	Q5SZI6.
Family and domain databases
InterPro	IPR023415. LDLR_class-A_CS. IPR002172. LDrepeatLR_classA_rpt. [Graphical view]
Gene3D	G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 3 hits.
Pfam	PF00057. Ldl_recept_a. 3 hits. [Graphical view]
SMART	SM00192. LDLa. 3 hits. [Graphical view]
SUPFAM	SSF57424. LDL_rcpt_classA_cys-rich. 3 hits.
PROSITE	PS01209. LDLRA_1. 2 hits. PS50068. LDLRA_2. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5SZI6_HUMAN

Accession

Primary (citable) accession number: Q5SZI6

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.