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Q5SY13

- COAS1_HUMAN

UniProt

Q5SY13 - COAS1_HUMAN

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Protein
Putative uncharacterized protein encoded by COL5A1-AS1
Gene
COL5A1-AS1, C9orf104
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein encoded by COL5A1-AS1
Alternative name(s):
COL5A1 antisense RNA 1
COL5A1 antisense gene protein 1
Gene namesi
Synonyms:C9orf104
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:31368. COL5A1-AS1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 5656Putative uncharacterized protein encoded by COL5A1-AS1
PRO_0000340729Add
BLAST

Proteomic databases

PaxDbiQ5SY13.
PeptideAtlasiQ5SY13.
PRIDEiQ5SY13.

Expressioni

Gene expression databases

GenevestigatoriQ5SY13.

Structurei

3D structure databases

ProteinModelPortaliQ5SY13.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000111654.

Sequencei

Sequence statusi: Complete.

Q5SY13-1 [UniParc]FASTAAdd to Basket

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MRRPWEKKEA TRNPIAEVLA RKKRTEELIS LQEHGSRKQK IKEASISWAE   50
TSRQIG 56
Length:56
Mass (Da):6,588
Last modified:December 21, 2004 - v1
Checksum:i11528B360B1FB881
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti12 – 121R → G in CR748640. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR748640 mRNA. No translation available.
AL591890 Genomic DNA. Translation: CAI15484.1.
UniGeneiHs.571561.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR748640 mRNA. No translation available.
AL591890 Genomic DNA. Translation: CAI15484.1 .
UniGenei Hs.571561.

3D structure databases

ProteinModelPortali Q5SY13.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q5SY13.
PeptideAtlasi Q5SY13.
PRIDEi Q5SY13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

GeneCardsi GC09M137542.
HGNCi HGNC:31368. COL5A1-AS1.
neXtProti NX_Q5SY13.
GenAtlasi Search...

Phylogenomic databases

HOGENOMi HOG000111654.

Gene expression databases

Genevestigatori Q5SY13.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. Ebert L., Heil O., Hennig S., Korn B., Neubert P., Partsch E., Peters M., Radelof U., Schneider D.
    Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCOAS1_HUMAN
AccessioniPrimary (citable) accession number: Q5SY13
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: December 21, 2004
Last modified: January 22, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Product of a dubious gene prediction.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM

External Data

Dasty 3

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