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Q5SY13

- COAS1_HUMAN

UniProt

Q5SY13 - COAS1_HUMAN

Protein

Putative uncharacterized protein encoded by COL5A1-AS1

Gene

COL5A1-AS1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein uncertaini
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein encoded by COL5A1-AS1
    Alternative name(s):
    COL5A1 antisense RNA 1
    COL5A1 antisense gene protein 1
    Gene namesi
    Name:COL5A1-AS1
    Synonyms:C9orf104
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Unplaced

    Organism-specific databases

    HGNCiHGNC:31368. COL5A1-AS1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 5656Putative uncharacterized protein encoded by COL5A1-AS1PRO_0000340729Add
    BLAST

    Proteomic databases

    PaxDbiQ5SY13.
    PeptideAtlasiQ5SY13.
    PRIDEiQ5SY13.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5SY13.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5SY13.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000111654.

    Sequencei

    Sequence statusi: Complete.

    Q5SY13-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRPWEKKEA TRNPIAEVLA RKKRTEELIS LQEHGSRKQK IKEASISWAE   50
    TSRQIG 56
    Length:56
    Mass (Da):6,588
    Last modified:December 21, 2004 - v1
    Checksum:i11528B360B1FB881
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti12 – 121R → G in CR748640. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR748640 mRNA. No translation available.
    AL591890 Genomic DNA. Translation: CAI15484.1.
    UniGeneiHs.571561.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR748640 mRNA. No translation available.
    AL591890 Genomic DNA. Translation: CAI15484.1 .
    UniGenei Hs.571561.

    3D structure databases

    ProteinModelPortali Q5SY13.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi Q5SY13.
    PeptideAtlasi Q5SY13.
    PRIDEi Q5SY13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    GeneCardsi GC09M137542.
    HGNCi HGNC:31368. COL5A1-AS1.
    neXtProti NX_Q5SY13.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000111654.

    Gene expression databases

    Genevestigatori Q5SY13.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. Ebert L., Heil O., Hennig S., Korn B., Neubert P., Partsch E., Peters M., Radelof U., Schneider D.
      Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    2. "DNA sequence and analysis of human chromosome 9."
      Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
      , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
      Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiCOAS1_HUMAN
    AccessioniPrimary (citable) accession number: Q5SY13
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 10, 2008
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Product of a dubious gene prediction.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 9
      Human chromosome 9: entries, gene names and cross-references to MIM

    External Data

    Dasty 3