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Protein
Submitted name:

Colony stimulating factor 2 (Granulocyte-macrophage)

Gene

Csf2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Colony stimulating factor 2 (Granulocyte-macrophage)Imported
Submitted name:
Granulocyte-macrophage colony stimulating factor 2Imported
Gene namesi
Name:Csf2Imported
ORF Names:mCG_13784Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1339752. Csf2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 141124Sequence analysisPRO_5007925091Add
BLAST

Expressioni

Gene expression databases

BgeeiENSMUSG00000018916.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000019060.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410JBQ7. Eukaryota.
ENOG411164J. LUCA.
GeneTreeiENSGT00390000013425.
HOVERGENiHBG000532.
KOiK05427.
OMAiTCLQTRL.
OrthoDBiEOG091G0XFL.

Family and domain databases

CDDicd00040. CSF2. 1 hit.
Gene3Di1.20.1250.10. 1 hit.
InterProiIPR009079. 4_helix_cytokine-like_core.
IPR012351. 4_helix_cytokine_core.
IPR000773. GM_colony-stim-fac.
[Graphical view]
PANTHERiPTHR10059. PTHR10059. 1 hit.
PfamiPF01109. GM_CSF. 1 hit.
[Graphical view]
PRINTSiPR00693. GMCSFACTOR.
ProDomiPD007349. GM_colony-stim-fac. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00040. CSF2. 1 hit.
[Graphical view]
SUPFAMiSSF47266. SSF47266. 1 hit.
PROSITEiPS00702. GM_CSF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SX78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWLQNLLFLG IVVYSLSAPT RSPITVTRPW KHVEAIKEAL NLLDDMPVTL
60 70 80 90 100
NEEVEVVSNE FSFKKLTCVQ TRLKIFEQGL RGNFTKLKGA LNMTASYYQT
110 120 130 140
YCPPTPETDC ETQVTTYADF IDSLKTFLTD IPFECKKPGQ K
Length:141
Mass (Da):16,091
Last modified:May 10, 2005 - v1
Checksum:i209C7CBB4FF77349
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU366957 mRNA. Translation: ABY66391.1.
AK053196 mRNA. Translation: BAE20692.1.
CH466575 Genomic DNA. Translation: EDL33540.1.
RefSeqiNP_034099.2. NM_009969.4.
UniGeneiMm.4922.

Genome annotation databases

GeneIDi12981.
KEGGimmu:12981.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU366957 mRNA. Translation: ABY66391.1.
AK053196 mRNA. Translation: BAE20692.1.
CH466575 Genomic DNA. Translation: EDL33540.1.
RefSeqiNP_034099.2. NM_009969.4.
UniGeneiMm.4922.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000019060.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi12981.
KEGGimmu:12981.

Organism-specific databases

CTDi1437.
MGIiMGI:1339752. Csf2.

Phylogenomic databases

eggNOGiENOG410JBQ7. Eukaryota.
ENOG411164J. LUCA.
GeneTreeiENSGT00390000013425.
HOVERGENiHBG000532.
KOiK05427.
OMAiTCLQTRL.
OrthoDBiEOG091G0XFL.

Miscellaneous databases

ChiTaRSiCsf2. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000018916.

Family and domain databases

CDDicd00040. CSF2. 1 hit.
Gene3Di1.20.1250.10. 1 hit.
InterProiIPR009079. 4_helix_cytokine-like_core.
IPR012351. 4_helix_cytokine_core.
IPR000773. GM_colony-stim-fac.
[Graphical view]
PANTHERiPTHR10059. PTHR10059. 1 hit.
PfamiPF01109. GM_CSF. 1 hit.
[Graphical view]
PRINTSiPR00693. GMCSFACTOR.
ProDomiPD007349. GM_colony-stim-fac. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00040. CSF2. 1 hit.
[Graphical view]
SUPFAMiSSF47266. SSF47266. 1 hit.
PROSITEiPS00702. GM_CSF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SX78_MOUSE
AccessioniPrimary (citable) accession number: Q5SX78
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.