Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA-binding protein Ikaros

Gene

Ikzf1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding protein IkarosImported
Gene namesi
Name:Ikzf1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1342540. Ikzf1.

PTM / Processingi

Proteomic databases

MaxQBiQ5SWT9.
PaxDbiQ5SWT9.
PRIDEiQ5SWT9.

PTM databases

iPTMnetiQ5SWT9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000018654.
ExpressionAtlasiQ5SWT9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075992.

Structurei

3D structure databases

ProteinModelPortaliQ5SWT9.
SMRiQ5SWT9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 164C2H2-typeInterPro annotationAdd BLAST28
Domaini165 – 192C2H2-typeInterPro annotationAdd BLAST28
Domaini193 – 220C2H2-typeInterPro annotationAdd BLAST28
Domaini221 – 249C2H2-typeInterPro annotationAdd BLAST29

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00550000074392.
HOGENOMiHOG000049114.
HOVERGENiHBG004752.
OMAiGDKCLSD.
OrthoDBiEOG091G05E2.

Family and domain databases

Gene3Di3.30.160.60. 4 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 6 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SWT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVDEGQDMS QVSGKESPPV SDTPDEGDEP MPVPEDLSTT SGAQQNSKSD
60 70 80 90 100
RGMVAYGADG FRDFHAIIPK SFSPSNVKVE TQSDEENGRA CEMNGEECAE
110 120 130 140 150
DLRMLDASGE KMNGSHRDQG SSALSGVGGI RLPNGKLKCD ICGIVCIGPN
160 170 180 190 200
VLMVHKRSHT GERPFQCNQC GASFTQKGNL LRHIKLHSGE KPFKCHLCNY
210 220 230 240 250
ACRRRDALTG HLRTHSVGKP HKCGYCGRSY KQRSSLEEHK ERCHNYLESM
260 270 280 290 300
GLPGMYPVIK EETNHNEMAE DLCKIGAERS LVLDRLASNV AKRKSSMPQK
310 320 330 340 350
FLGDKCLSDM PYDSANYEKE DMMTSHVMDQ AINNAINYLG AESLRPLVQT
360 370 380 390 400
PPGSSEVVPV ISSMYQLHKP PSDGPPRSNH SAQDAVDNLL LLSKAKSVSS
410 420 430 440 450
EREASPSNSC QDSTDTESNA EEQRSGLIYL TNHINPHARN GLALKEEQRA
460 470 480 490 500
YEVLRAASEN SQDAFRVVST SGEQLKVYKC EHCRVLFLDH VMYTIHMGCH
510 520 530
GFRDPFECNM CGYHSQDRYE FSSHITRGEH RYHLS
Length:535
Mass (Da):59,408
Last modified:December 21, 2004 - v1
Checksum:iCE37432CB83C1947
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596450 Genomic DNA. No translation available.
RefSeqiXP_011242002.1. XM_011243700.2.
XP_011242010.1. XM_011243708.1.
XP_011242011.1. XM_011243709.1.
XP_011242012.1. XM_011243710.2.
XP_011242013.1. XM_011243711.1.
UniGeneiMm.103545.

Genome annotation databases

EnsembliENSMUST00000065433; ENSMUSP00000067372; ENSMUSG00000018654.
GeneIDi22778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596450 Genomic DNA. No translation available.
RefSeqiXP_011242002.1. XM_011243700.2.
XP_011242010.1. XM_011243708.1.
XP_011242011.1. XM_011243709.1.
XP_011242012.1. XM_011243710.2.
XP_011242013.1. XM_011243711.1.
UniGeneiMm.103545.

3D structure databases

ProteinModelPortaliQ5SWT9.
SMRiQ5SWT9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075992.

PTM databases

iPTMnetiQ5SWT9.

Proteomic databases

MaxQBiQ5SWT9.
PaxDbiQ5SWT9.
PRIDEiQ5SWT9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000065433; ENSMUSP00000067372; ENSMUSG00000018654.
GeneIDi22778.

Organism-specific databases

CTDi10320.
MGIiMGI:1342540. Ikzf1.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00550000074392.
HOGENOMiHOG000049114.
HOVERGENiHBG004752.
OMAiGDKCLSD.
OrthoDBiEOG091G05E2.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000018654.
ExpressionAtlasiQ5SWT9. baseline and differential.

Family and domain databases

Gene3Di3.30.160.60. 4 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 6 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SWT9_MOUSE
AccessioniPrimary (citable) accession number: Q5SWT9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: November 2, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.