UniProtKB - Q5SV02 (Q5SV02_MOUSE)
(max 400 entries)x
Your basket is currently empty. i
Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)
Protein
Submitted name:
DNA repair protein RAD50
Gene
Rad50
Organism
Mus musculus (Mouse)
Status
Functioni
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 681 | ZincPROSITE-ProRule annotation | 1 | |
Metal bindingi | 684 | ZincPROSITE-ProRule annotation | 1 |
GO - Molecular functioni
- ATPase activity Source: InterPro
- metal ion binding Source: UniProtKB-UniRule
GO - Biological processi
- DNA repair Source: InterPro
- telomere maintenance Source: InterPro
Keywordsi
Ligand | Metal-bindingPROSITE-ProRule annotation, ZincPROSITE-ProRule annotation |
Enzyme and pathway databases
Reactomei | R-MMU-2559586. DNA Damage/Telomere Stress Induced Senescence. R-MMU-5685938. HDR through Single Strand Annealing (SSA). R-MMU-5685939. HDR through MMEJ (alt-NHEJ). R-MMU-5685942. HDR through Homologous Recombination (HRR). R-MMU-5693548. Sensing of DNA Double Strand Breaks. R-MMU-5693554. Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA). R-MMU-5693565. Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks. R-MMU-5693568. Resolution of D-loop Structures through Holliday Junction Intermediates. R-MMU-5693571. Nonhomologous End-Joining (NHEJ). R-MMU-5693579. Homologous DNA Pairing and Strand Exchange. R-MMU-5693607. Processing of DNA double-strand break ends. R-MMU-5693616. Presynaptic phase of homologous DNA pairing and strand exchange. R-MMU-6804756. Regulation of TP53 Activity through Phosphorylation. R-MMU-69473. G2/M DNA damage checkpoint. |
Names & Taxonomyi
Protein namesi | Submitted name: DNA repair protein RAD50ImportedSubmitted name: RAD50 homolog (S. cerevisiae)Imported |
Gene namesi | Name:Rad50Imported ORF Names:mCG_119249Imported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:109292. Rad50. |
Subcellular locationi
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 635 – 734 | Zinc-hookInterPro annotationAdd BLAST | 100 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 227 – 299 | Sequence analysisAdd BLAST | 73 | |
Coiled coili | 308 – 349 | Sequence analysisAdd BLAST | 42 | |
Coiled coili | 401 – 435 | Sequence analysisAdd BLAST | 35 | |
Coiled coili | 450 – 531 | Sequence analysisAdd BLAST | 82 | |
Coiled coili | 580 – 628 | Sequence analysisAdd BLAST | 49 | |
Coiled coili | 635 – 655 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 712 – 732 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 740 – 774 | Sequence analysisAdd BLAST | 35 | |
Coiled coili | 795 – 815 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 825 – 939 | Sequence analysisAdd BLAST | 115 | |
Coiled coili | 1024 – 1070 | Sequence analysisAdd BLAST | 47 |
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG0962. Eukaryota. COG0419. LUCA. |
GeneTreei | ENSGT00390000018781. |
HOVERGENi | HBG058033. |
KOi | K10866. |
OMAi | RSMVCTQ. |
OrthoDBi | EOG091G01KA. |
TreeFami | TF101217. |
Family and domain databases
InterProi | View protein in InterPro IPR027417. P-loop_NTPase. IPR004584. Rad50_eukaryotes. IPR013134. Zn_hook_RAD50. |
Pfami | View protein in Pfam PF04423. Rad50_zn_hook. 1 hit. |
SUPFAMi | SSF52540. SSF52540. 3 hits. |
TIGRFAMsi | TIGR00606. rad50. 1 hit. |
PROSITEi | View protein in PROSITE PS51131. ZN_HOOK. 1 hit. |
i Sequence
Sequence statusi: Complete.
Q5SV02-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSRIEKMSIL GVRSFGIEDK DKQIISFFSP LTILVGPNGA GKTTIIECLK
60 70 80 90 100
YICTGDFPPG TKGNTFVHDP KVAQETDVRA QIRLQFRDVN GEMVAVHRSM
110 120 130 140 150
LCSQKNKKTE FKTLEGVITR MKHGEKVSLS SKCAEIDREM ISCLGVSKSV
160 170 180 190 200
LNNVIFCHQE DSNWPLSEGK ALKQKFDEIF SATRYIKALD TLRQVRQTQG
210 220 230 240 250
QKVKECQTEL KYLKQNKEKA CEIRDQITSK EAQLASSQEI VRSYEDELEP
260 270 280 290 300
LKNRLKEIEH NLSKIMKLDN EIKALESRKK QMEKDNSELE QKMEKVFQGT
310 320 330 340 350
DEQLNDLYHN HQRTVREKER RLVDCQRELE KLNKEARLLN QEKAELLVEQ
360 370 380 390 400
GRLQLQADRH QEHIRARDSL IQSLATHLEL DGFERGPFSE RQIKNFHELV
410 420 430 440 450
KERQEREAKT ASQLLSDLTD KEALKQRQLD ELRDRKSGLG RTIELKTEIL
460 470 480 490 500
TKKQSELRHV RSELQQLEGS SDRILELDQE LTKAERELSK AEKNSSIETL
510 520 530 540 550
KAEVMSLQNE KADLDRSLRK LDQEMEQLNH HTTTRTQMEM LTKDKTDKDE
560 570 580 590 600
QIRKIKSRHS DELTSLLGYF PNKKQLEDWL HSKSKEINQT RDRLAKLNKE
610 620 630 640 650
LASAEQNKNH INNELKKKEE QLSSYEDKLF DVCGSQDLES DLGRLKEEIE
660 670 680 690 700
KSSKQRAMLA GATAVYSQFI TQLTDENQSC CPVCQRVFQT EAELQEVISD
710 720 730 740 750
LQSKLRLAPD KLKSTESELK KKERRRDEML GLVPVRQSII DLKEKEIPEL
760 770 780 790 800
RNRLQSVNRD IQRLKNDIEE QETLLGTIMP EEESAKVCLT DVTIMERFQM
810 820 830 840 850
ELKDVERKIA QQAAKLQGVD LDRTVQQVNQ EKQEKQHRLD TVTSKIELNR
860 870 880 890 900
KLIQDQQEQI QHLKSKTNEL KSEKLQIATN LQRRQQMEEQ SVELSTEVQS
910 920 930 940 950
LNREIKDAKE QISPLETALE KLQQEKEELI HRKHTSNKMA QDKINDIKEK
960 970 980 990 1000
VKNIHGYMKD IENYIQDGKD DYKKQKETEL NGVAVQLNEC EKHREKINKD
1010 1020 1030 1040 1050
MGTMRQDIDT QKIQERWLQD NLTLRKRRDE LKEVEEERKQ HLKEMGQMQV
1060 1070 1080 1090 1100
LQMKNEHQKL EENIDTIKRN HSLALGRQKG YEDEILHFKK ELREPQFRDA
1110 1120 1130 1140 1150
EEKYREMMIV MRTTELVNKD LDIYYKTLDQ AIMKFHSMKM EEINKIIRDL
1160 1170 1180 1190 1200
WRSTYRGQDI EYIEIRSDAD ENVSASDKRR NYNYRVVMLK GDTALDMRGR
1210 1220 1230 1240 1250
CSAGQKVLAS LIIRLALAET FCLNCGILAL DEPTTNLDRE NIESLAHALV
1260 1270 1280 1290 1300
EIIKSRSQQR NFQLLVITHD EDFVELLGRS EYVEKFYRVK KNMDQCSEIV
1310
KCSISSLGSY VH
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL645741 Genomic DNA. No translation available. CH466575 Genomic DNA. Translation: EDL33574.1. |
RefSeqi | NP_033038.2. NM_009012.2. |
UniGenei | Mm.4888. |
Genome annotation databases
Ensembli | ENSMUST00000020649; ENSMUSP00000020649; ENSMUSG00000020380. |
GeneIDi | 19360. |
KEGGi | mmu:19360. |
UCSCi | uc007iwt.1. mouse. |
Similar proteinsi
Entry informationi
Entry namei | Q5SV02_MOUSE | |
Accessioni | Q5SV02Primary (citable) accession number: Q5SV02 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 21, 2004 |
Last sequence update: | December 21, 2004 | |
Last modified: | February 28, 2018 | |
This is version 119 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |