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Protein
Submitted name:

Uncharacterized protein

Gene

Irf4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Irf4Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1096873. Irf4.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

PTM / Processingi

Proteomic databases

PaxDbiQ5SUZ5.

Expressioni

Gene expression databases

BgeeiENSMUSG00000021356.
ExpressionAtlasiQ5SUZ5. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5SUZ5.
SMRiQ5SUZ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 129IRF tryptophan pentad repeat DNA-bindingInterPro annotationAdd BLAST109

Sequence similaritiesi

Belongs to the IRF family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IES5. Eukaryota.
ENOG411023V. LUCA.
HOGENOMiHOG000010107.
HOVERGENiHBG003072.

Family and domain databases

CDDicd00103. IRF. 1 hit.
Gene3Di1.10.10.10. 1 hit.
2.60.200.10. 1 hit.
InterProiView protein in InterPro
IPR019817. Interferon_reg_fac_CS.
IPR001346. Interferon_reg_fact_DNA-bd_dom.
IPR019471. Interferon_reg_factor-3.
IPR017855. SMAD_dom-like.
IPR008984. SMAD_FHA_domain.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR11949. PTHR11949. 1 hit.
PfamiView protein in Pfam
PF00605. IRF. 1 hit.
PF10401. IRF-3. 1 hit.
PRINTSiPR00267. INTFRNREGFCT.
SMARTiView protein in SMART
SM00348. IRF. 1 hit.
SM01243. IRF-3. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF49879. SSF49879. 1 hit.
PROSITEiView protein in PROSITE
PS00601. IRF_1. 1 hit.
PS51507. IRF_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SUZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLETGSRGS EFGMSAVSCG NGKLRQWLID QIDSGKYPGL VWENEEKSVF
60 70 80 90 100
RIPWKHAGKQ DYNREEDAAL FKAWALFKGK FREGIDKPDP PTWKTRLRCA
110 120 130 140 150
LNKSNDFEEL VERSQLDISD PYKVYRIVPE GAKKGAKQLT LDDTQMAMGH
160 170 180 190 200
PYPMTAPYGS LPAQVHNYMM PPHDRSWRDY APDQSHPEIP YQCPVTFGPR
210 220 230 240 250
GHHWQGPSCE NGCQVTGTFY ACAPPESQAP GIPIEPSIRS AEALALSDCR
260 270 280 290 300
LHICLYYRDI LVKELTTTSP EGCRISHGHT YDVSNLDQVL FPYPDDNGQR
310 320 330 340 350
KNIEKLLSHL ERGLVLWMAP DGLYAKRLCQ SRIYWDGPLA LCSDRPNKLE
360 370 380 390 400
RDQTCKLFDT QQFLSELQVF AHHGRPAPRF QVTLCFGEEF PDPQRQRKLI
410 420 430 440
TAHVEPLLAR QLYYFAQQNT GHFLRGYELP EHVTTPDYHR SLRHSSIQE
Length:449
Mass (Da):51,449
Last modified:May 10, 2005 - v1
Checksum:iC4E4A0DC04AA8A52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK089319 mRNA. Translation: BAC40840.1.
RefSeqiNP_001334437.1. NM_001347508.1.
UniGeneiMm.4677.

Genome annotation databases

GeneIDi16364.
UCSCiuc007pza.1. mouse.

Similar proteinsi

Entry informationi

Entry nameiQ5SUZ5_MOUSE
AccessioniPrimary (citable) accession number: Q5SUZ5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: August 30, 2017
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation