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Q5SUV8

- Q5SUV8_MOUSE

UniProt

Q5SUV8 - Q5SUV8_MOUSE

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Protein
Submitted name:

Putative uncharacterized protein

Gene

Ddc

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. amino acid binding Source: Ensembl
  2. aromatic-L-amino-acid decarboxylase activity Source: MGI
  3. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. cellular amino acid metabolic process Source: InterPro
  2. cellular response to alkaloid Source: Ensembl
  3. cellular response to drug Source: Ensembl
  4. cellular response to growth factor stimulus Source: Ensembl
  5. circadian rhythm Source: Ensembl
  6. isoquinoline alkaloid metabolic process Source: Ensembl
  7. multicellular organismal aging Source: Ensembl
  8. phytoalexin metabolic process Source: Ensembl
  9. response to pyrethroid Source: Ensembl
  10. response to toxic substance Source: MGI
  11. serotonin biosynthetic process Source: Ensembl
  12. synaptic vesicle amine transport Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:DdcImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:94876. Ddc.

Subcellular locationi

GO - Cellular componenti

  1. axon Source: Ensembl
  2. cytoplasm Source: MGI
  3. extracellular vesicular exosome Source: Ensembl
  4. neuronal cell body Source: Ensembl
  5. synaptic vesicle Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ5SUV8.

Expressioni

Gene expression databases

ExpressionAtlasiQ5SUV8. baseline and differential.
GenevestigatoriQ5SUV8.

Structurei

3D structure databases

ProteinModelPortaliQ5SUV8.
SMRiQ5SUV8. Positions 1-475.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000119205.
HOVERGENiHBG000944.
KOiK01593.
OMAiPICNKED.
PhylomeDBiQ5SUV8.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR010977. Aromatic_deC.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
PRINTSiPR00800. YHDCRBOXLASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SUV8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDSREFRRRG KEMVDYIADY LDGIEGRPVY PDVEPGYLRP LIPATAPQEP
60 70 80 90 100
ETYEDIIKDI EKIIMPGVTH WHSPYFFAYF PTASSYPAML ADMLCGAIGC
110 120 130 140 150
IGFSWAASPA CTELETVMMD WLGKMLELPE AFLAGRAGEG GGVIQGSASE
160 170 180 190 200
ATLVALLAAR TKVIRQLQAA SPEFTQAAIM EKLVAYTSDQ AHSSVERAGL
210 220 230 240 250
IGGIKLKAVP SDGNFSMRAS ALREALERDK AAGLIPFFVV ATLGTTSCCS
260 270 280 290 300
FDNLLEVGPI CNQEGVWLHI DAAYAGSAFI CPEFRYLLNG VEFADSFNFN
310 320 330 340 350
PHKWLLVNFD CSAMWVKRRT DLTGAFNMDP VYLKHSHQDS GFITDYRHWQ
360 370 380 390 400
IPLGRRFRSL KMWFVFRMYG VKGLQAYIRK HVELSHEFES LVRQDPRFEI
410 420 430 440 450
CTEVILGLVC FRLKGSNELN ETLLQRINSA KKIHLVPCRL RDKFVLRFAV
460 470 480
CARTVESAHV QLAWEHISDL ASSVLRAEKE
Length:480
Mass (Da):53,874
Last modified:May 10, 2005 - v1
Checksum:iD6C1CA504AC2D10E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK149141 mRNA. Translation: BAE28750.1.
RefSeqiNP_001177377.1. NM_001190448.1.
NP_057881.1. NM_016672.4.
XP_006514550.1. XM_006514487.1.
XP_006514551.1. XM_006514488.1.
XP_006514552.1. XM_006514489.1.
XP_006514553.1. XM_006514490.1.
UniGeneiMm.12906.

Genome annotation databases

GeneIDi13195.
KEGGimmu:13195.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK149141 mRNA. Translation: BAE28750.1 .
RefSeqi NP_001177377.1. NM_001190448.1.
NP_057881.1. NM_016672.4.
XP_006514550.1. XM_006514487.1.
XP_006514551.1. XM_006514488.1.
XP_006514552.1. XM_006514489.1.
XP_006514553.1. XM_006514490.1.
UniGenei Mm.12906.

3D structure databases

ProteinModelPortali Q5SUV8.
SMRi Q5SUV8. Positions 1-475.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5SUV8.

Protocols and materials databases

DNASUi 13195.
Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 13195.
KEGGi mmu:13195.

Organism-specific databases

CTDi 1644.
MGIi MGI:94876. Ddc.

Phylogenomic databases

GeneTreei ENSGT00760000119205.
HOVERGENi HBG000944.
KOi K01593.
OMAi PICNKED.
PhylomeDBi Q5SUV8.

Miscellaneous databases

NextBioi 283324.
SOURCEi Search...

Gene expression databases

ExpressionAtlasi Q5SUV8. baseline and differential.
Genevestigatori Q5SUV8.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR010977. Aromatic_deC.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
PRINTSi PR00800. YHDCRBOXLASE.
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Sympathetic ganglionImported.

Entry informationi

Entry nameiQ5SUV8_MOUSE
AccessioniPrimary (citable) accession number: Q5SUV8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)