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Protein
Submitted name:

RNA-binding protein EWS

Gene

Ewsr1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein EWSImported
Gene namesi
Name:Ewsr1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:99960. Ewsr1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiQ5SUS9.
PaxDbiQ5SUS9.
PeptideAtlasiQ5SUS9.
PRIDEiQ5SUS9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000009079.
ExpressionAtlasiQ5SUS9. baseline and differential.

Interactioni

Protein-protein interaction databases

MINTiMINT-4084863.
STRINGi10090.ENSMUSP00000078867.

Structurei

3D structure databases

ProteinModelPortaliQ5SUS9.
SMRiQ5SUS9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini366 – 452RRM (RNA recognition motif)InterPro annotationAdd BLAST87
Domaini523 – 554RanBP2-typeInterPro annotationAdd BLAST32

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiKOG1995. Eukaryota.
ENOG4111Q2F. LUCA.
GeneTreeiENSGT00530000063105.
HOGENOMiHOG000038010.
HOVERGENiHBG000970.
OMAiQSAFRQD.
OrthoDBiEOG091G0U8W.
PhylomeDBiQ5SUS9.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProiIPR033109. EWSR1.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view]
PANTHERiPTHR23238:SF3. PTHR23238:SF3. 2 hits.
PfamiPF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SUS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV
60 70 80 90 100
SYTQAQTTAT YGQTAYATSY GQPPTVEGTS TGYSTPTAPQ AYSQPVQGYG
110 120 130 140 150
TGTYDSTTAT VTTTQASYAA QTAYGTQPAY PTYGQQPTAT APTRPQDGNK
160 170 180 190 200
PAETSQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV TAPPSYPPTS
210 220 230 240 250
YSSSQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT
260 270 280 290 300
GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSL
310 320 330 340 350
SGPDNRGRGR GGFDRGGMSR GGRGGGRGGL GAGERGGFNK PGGPMDEGPD
360 370 380 390 400
LDLGLPIDPD EDSDNSAIYV QGLNDNVTLD DLADFFKQCG VVKMNKRTGQ
410 420 430 440 450
PMIHIYLDKE TGKPKGDATV SYEDPPTAKA AVEWFDGKDF QGSKLKVSLA
460 470 480 490 500
RKKPPMNSMR GGMPPREGRG MPPPLRGGPG GPGGPGGPMG RMGGRGGDRG
510 520 530 540 550
GFPPRGPRGS RGNPSGGGNV QHRAGDWQCP NPGCGNQNFA WRTECNQCKA
560 570 580 590 600
PKPEGFLPPP FPPPGGDRGR GGPGGMRGGR GGLMDRGGPG GMFRGGRGGD
610 620 630 640 650
RGGFRGGRGM DRGGFGGGRR GGPGGPPGPL MEQMGGRRGG RGGPGKMDKG
660
EHRQERRDRP Y
Length:661
Mass (Da):69,037
Last modified:December 21, 2004 - v1
Checksum:iFA7AE85BD6057B77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL645845 Genomic DNA. No translation available.
RefSeqiXP_006514575.1. XM_006514512.3.
UniGeneiMm.142822.

Genome annotation databases

EnsembliENSMUST00000102930; ENSMUSP00000099994; ENSMUSG00000009079.
GeneIDi14030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL645845 Genomic DNA. No translation available.
RefSeqiXP_006514575.1. XM_006514512.3.
UniGeneiMm.142822.

3D structure databases

ProteinModelPortaliQ5SUS9.
SMRiQ5SUS9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4084863.
STRINGi10090.ENSMUSP00000078867.

Proteomic databases

MaxQBiQ5SUS9.
PaxDbiQ5SUS9.
PeptideAtlasiQ5SUS9.
PRIDEiQ5SUS9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000102930; ENSMUSP00000099994; ENSMUSG00000009079.
GeneIDi14030.

Organism-specific databases

CTDi2130.
MGIiMGI:99960. Ewsr1.

Phylogenomic databases

eggNOGiKOG1995. Eukaryota.
ENOG4111Q2F. LUCA.
GeneTreeiENSGT00530000063105.
HOGENOMiHOG000038010.
HOVERGENiHBG000970.
OMAiQSAFRQD.
OrthoDBiEOG091G0U8W.
PhylomeDBiQ5SUS9.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000009079.
ExpressionAtlasiQ5SUS9. baseline and differential.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProiIPR033109. EWSR1.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view]
PANTHERiPTHR23238:SF3. PTHR23238:SF3. 2 hits.
PfamiPF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SUS9_MOUSE
AccessioniPrimary (citable) accession number: Q5SUS9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: November 30, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.