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Protein
Submitted name:

Protein Mmp28

Gene

Mmp28

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. metalloendopeptidase activity Source: MGI
  3. zinc ion binding Source: InterPro

GO - Biological processi

  1. negative regulation of macrophage chemotaxis Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, MetalloproteaseSAAS annotation, Protease

Keywords - Ligandi

CalciumSAAS annotation, Metal-bindingSAAS annotation, ZincSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Mmp28Imported
Gene namesi
Name:Mmp28Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2153062. Mmp28.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: MGI
  2. proteinaceous extracellular matrix Source: InterPro
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiQ5SSG2.
PRIDEiQ5SSG2.

Expressioni

Gene expression databases

BgeeiQ5SSG2.
ExpressionAtlasiQ5SSG2. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5SSG2.
SMRiQ5SSG2. Positions 37-390.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiNOG254923.
GeneTreeiENSGT00760000119132.
HOGENOMiHOG000217927.
HOVERGENiHBG052484.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
2.110.10.10. 1 hit.
3.40.390.10. 1 hit.
InterProiIPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR024079. MetalloPept_cat_dom.
IPR028735. MMP28.
IPR001818. Pept_M10_metallopeptidase.
IPR021190. Pept_M10A.
IPR016293. Pept_M10A_stromelysin-type.
IPR006026. Peptidase_Metallo.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERiPTHR10201:SF16. PTHR10201:SF16. 1 hit.
PfamiPF00045. Hemopexin. 1 hit.
PF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view]
PIRSFiPIRSF001191. Peptidase_M10A_matrix. 1 hit.
PRINTSiPR00138. MATRIXIN.
SMARTiSM00120. HX. 1 hit.
SM00235. ZnMc. 1 hit.
[Graphical view]
SUPFAMiSSF47090. SSF47090. 1 hit.
SSF50923. SSF50923. 1 hit.
PROSITEiPS51642. HEMOPEXIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SSG2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAGVSLLLR ALPLLLWGCQ DAQPTQHGLP ELRQEAEAFL EKYGYLSEQG
60 70 80 90 100
SKAPASAQFR NAIREFQWIS QLPLSGVLDQ ATLRQMTRPR CGVADTDSHA
110 120 130 140 150
TWTERISTLL AGHRAKMRRK KRFAKPGNKW YKQHLSYRLV NWPERLPEPA
160 170 180 190 200
VRGAVRAAFQ LWSNVSALEF WEAPATGPAD IRLTFFQGDH NDGLANAFDG
210 220 230 240 250
PGGALAHAFL PRRGEAHFDG DERWSLSRRR GRNLFVVLAH EIGHTLGLTH
260 270 280 290 300
SPAPRALMAP YYKKLGRDAL LSWDDVLAVQ SLYGKPLGRS VATQLPGKVF
310 320 330 340 350
TDFEAWDPHN SQSRRPETRG PKYCHSSFDA ITVDGQWRLY VFKGSYFWEV
360 370 380 390 400
TVDGNVSEPR PLQKRWPGLP PGIEAAAVSL EDGDFYFFKG TGRRKDREQT

PFPSGNY
Length:407
Mass (Da):45,838
Last modified:April 8, 2008 - v2
Checksum:i291BE954C1669FA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL663096 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000119346; ENSMUSP00000112566; ENSMUSG00000020682.
UCSCiuc007kpd.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL663096 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliQ5SSG2.
SMRiQ5SSG2. Positions 37-390.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ5SSG2.
PRIDEiQ5SSG2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000119346; ENSMUSP00000112566; ENSMUSG00000020682.
UCSCiuc007kpd.1. mouse.

Organism-specific databases

MGIiMGI:2153062. Mmp28.

Phylogenomic databases

eggNOGiNOG254923.
GeneTreeiENSGT00760000119132.
HOGENOMiHOG000217927.
HOVERGENiHBG052484.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ5SSG2.
ExpressionAtlasiQ5SSG2. baseline and differential.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
2.110.10.10. 1 hit.
3.40.390.10. 1 hit.
InterProiIPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR024079. MetalloPept_cat_dom.
IPR028735. MMP28.
IPR001818. Pept_M10_metallopeptidase.
IPR021190. Pept_M10A.
IPR016293. Pept_M10A_stromelysin-type.
IPR006026. Peptidase_Metallo.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERiPTHR10201:SF16. PTHR10201:SF16. 1 hit.
PfamiPF00045. Hemopexin. 1 hit.
PF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view]
PIRSFiPIRSF001191. Peptidase_M10A_matrix. 1 hit.
PRINTSiPR00138. MATRIXIN.
SMARTiSM00120. HX. 1 hit.
SM00235. ZnMc. 1 hit.
[Graphical view]
SUPFAMiSSF47090. SSF47090. 1 hit.
SSF50923. SSF50923. 1 hit.
PROSITEiPS51642. HEMOPEXIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ5SSG2_MOUSE
AccessioniPrimary (citable) accession number: Q5SSG2
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: April 8, 2008
Last modified: April 1, 2015
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.