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Q5SR36

- Q5SR36_HUMAN

UniProt

Q5SR36 - Q5SR36_HUMAN

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Protein
Submitted name:

ETS-related transcription factor Elf-3

Gene

ELF3

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ETS-related transcription factor Elf-3Imported
Gene namesi
Name:ELF3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:3318. ELF3.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiQ5SR36. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5SR36.
SMRiQ5SR36. Positions 48-130.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118996.
HOGENOMiHOG000232188.
HOVERGENiHBG074143.

Family and domain databases

Gene3Di1.10.150.50. 1 hit.
InterProiIPR003118. Pointed_dom.
IPR013761. SAM/pointed.
[Graphical view]
PfamiPF02198. SAM_PNT. 1 hit.
[Graphical view]
SMARTiSM00251. SAM_PNT. 1 hit.
[Graphical view]
SUPFAMiSSF47769. SSF47769. 1 hit.
PROSITEiPS51433. PNT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q5SR36-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAATCEISNI FSNYFSAMYS SEDSTLASVP PAATFGADDL VLTLSNPQMS
60 70 80 90 100
LEEKASWLGE QPQFWSKTQV LDWISYQVEK NKYDASAIDF SRCDMDGATL
110 120 130 140 150
CNCALEELRL VFGPLGDQLH AQLRDLTSSS SDELSWIIEL LEKDGMAFQE
160 170 180 190 200
ALDPGPFDQG SPFAQELLDD GQQASPYHPG SCGAGAPSPG SSDVSTAGTG
210 220 230
ASRSSHSSDS GGSDVDLDPT DGKLFPSDGF RD
Length:232
Mass (Da):24,763
Last modified:December 21, 2004 - v1
Checksum:i82CBCE6F0401D417
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei232 – 2321Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL691482 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000446188; ENSP00000405162; ENSG00000163435.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL691482 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali Q5SR36.
SMRi Q5SR36. Positions 48-130.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000446188 ; ENSP00000405162 ; ENSG00000163435 .

Organism-specific databases

HGNCi HGNC:3318. ELF3.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00760000118996.
HOGENOMi HOG000232188.
HOVERGENi HBG074143.

Miscellaneous databases

ChiTaRSi ELF3. human.

Gene expression databases

ExpressionAtlasi Q5SR36. baseline and differential.

Family and domain databases

Gene3Di 1.10.150.50. 1 hit.
InterProi IPR003118. Pointed_dom.
IPR013761. SAM/pointed.
[Graphical view ]
Pfami PF02198. SAM_PNT. 1 hit.
[Graphical view ]
SMARTi SM00251. SAM_PNT. 1 hit.
[Graphical view ]
SUPFAMi SSF47769. SSF47769. 1 hit.
PROSITEi PS51433. PNT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., Langford C.F., Pandian R.D., Porter K.M., Prigmore E.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5SR36_HUMAN
AccessioniPrimary (citable) accession number: Q5SR36
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: October 29, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3