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Unreviewed, UniProtKB/TrEMBL Q5SQN6 (Q5SQN6_HUMAN)

Last modified February 9, 2010. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Acyl-Coenzyme A dehydrogenase, short/branched chain EMBL CAI10847.1
Submitted name:
    cDNA, FLJ94986, Homo sapiens acyl-Coenzyme A dehydrogenase, short/branched chain(ACADSB), nuclear gene encoding mitochondrial protein, mRNA EMBL BAG36909.1
Gene names
Name: ACADSB EMBL CAI10847.1
ORF Names: RP11-162A23.1-001 EMBL CAI10847.1, hCG_1781685 EMBL EAW49291.1
OrganismHomo sapiens (Human) EMBL CAI10847.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family.

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Sequences

Sequence LengthMass (Da)Tools
Q5SQN6-1 [UniParc].

Last modified May 10, 2005. Version 1.
Checksum: 1EB5F894B1944E99

FASTA43247,485
        10         20         30         40         50         60 
MEGLAVRLLR GSRLLRRNFL TCLSSWKIPP HVSKSSQSEA LLNITNNGIH FAPLQTFTDE 

        70         80         90        100        110        120 
EMMIKSSVKK FAQEQIAPLV STMDENSKME KSVIQGLFQQ GLMGIEVDPE YGGTGASFLS 

       130        140        150        160        170        180 
TVLVIEELAK VDASVAVFCE IQNTLINTLI RKHGTEEQKA TYLPQLTTEK VGSFCLSEAG 

       190        200        210        220        230        240 
AGSDSFALKT RADKEGDYYV LNGSKMWISS AEHAGLFLVM ANVDPTIGYK GITSFLVDRD 

       250        260        270        280        290        300 
TPGLHIGKPE NKLGLRASST CPLTFENVKV PEANILGQIG HGYKYAIGSL NEGRIGIAAQ 

       310        320        330        340        350        360 
MLGLAQGCFD YTIPYIKERI QFGKRLFDFQ GLQHQVAHVA TQLEAARLLT YNAARLLEAG 

       370        380        390        400        410        420 
KPFIKEASMA KYYASEIAGQ TTSKCIEWMG GVGYTKDYPV EKYFRDAKIG TIYEGASNIQ 

       430 
LNTIAKHIDA EY

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References

[1]Brown A.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"NEDO functional analysis of protein and research application project."
Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Breast EMBL BAG36909.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK314241 mRNA. Translation: BAG36909.1.
AL731666, AC012391, AC073585 Genomic DNA. Translation: CAI10847.1.
CH471066 Genomic DNA. Translation: EAW49291.1.
IPIIPI00024623.
RefSeqNP_001600.1.
UniGeneHs.81934

3D structure databases

SMRQ5SQN6. Positions 52-432.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5SQN6.

Proteomic databases

PRIDEQ5SQN6.

Genome annotation databases

EnsemblENST00000358776; ENSP00000357873; ENSG00000196177; Homo sapiens. [Genome view]
GeneID36.
KEGGhsa:36.
NMPDRfig|9606.3.peg.4800.

Organism-specific databases

CTD36.
HGNCHGNC:91. ACADSB.
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ5SQN6.
OMASKIGTIY.
PhylomeDBQ5SQN6.

Gene expression databases

ArrayExpressQ5SQN6.
BgeeQ5SQN6.

Family and domain databases

InterProIPR006089. Acyl-CoA_DH_CS.
IPR006092. Acyl-CoA_DH_N.
IPR006090. Acyl-CoA_Oxase/DH_1.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase.
IPR013764. AcylCoA_oxidase/DH_1/2_C.
[Graphical view]
Gene3DG3DSA:2.40.110.10. Acyl_CoA_DH/ox_M. 1 hit.
G3DSA:1.10.540.10. AcylCoA_DH/ox_N. 1 hit.
G3DSA:1.20.140.10. AcylCoA_DH_1/2_C. 1 hit.
PfamPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
PROSITEPS00072. ACYL_COA_DH_1. 1 hit.
PS00073. ACYL_COA_DH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio139.

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Entry information

Entry nameQ5SQN6_HUMAN
AccessionPrimary (citable) accession number: Q5SQN6
Entry history
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: February 9, 2010
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information