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Protein
Submitted name:

Nucleophosmin

Gene

Npm1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. histone binding Source: MGI
  2. NF-kappaB binding Source: MGI
  3. poly(A) RNA binding Source: MGI
  4. protein heterodimerization activity Source: MGI
  5. protein homodimerization activity Source: MGI
  6. protein kinase binding Source: MGI
  7. protein kinase inhibitor activity Source: MGI
  8. ribosomal large subunit binding Source: MGI
  9. ribosomal small subunit binding Source: MGI
  10. RNA binding Source: MGI
  11. rRNA binding Source: MGI
  12. Tat protein binding Source: MGI
  13. transcription coactivator activity Source: MGI
  14. unfolded protein binding Source: MGI

GO - Biological processi

  1. cell aging Source: MGI
  2. cell growth Source: MGI
  3. cell volume homeostasis Source: MGI
  4. centrosome cycle Source: MGI
  5. DNA repair Source: MGI
  6. negative regulation of apoptotic process Source: MGI
  7. negative regulation of cell proliferation Source: MGI
  8. negative regulation of centrosome duplication Source: MGI
  9. negative regulation of mRNA splicing, via spliceosome Source: MGI
  10. negative regulation of protein kinase activity by regulation of protein phosphorylation Source: MGI
  11. nucleocytoplasmic transport Source: MGI
  12. nucleosome assembly Source: MGI
  13. positive regulation of cell proliferation Source: MGI
  14. positive regulation of cellular biosynthetic process Source: MGI
  15. positive regulation of centrosome duplication Source: MGI
  16. positive regulation of NF-kappaB transcription factor activity Source: MGI
  17. positive regulation of protein kinase activity Source: MGI
  18. positive regulation of translation Source: MGI
  19. protein localization Source: MGI
  20. protein oligomerization Source: MGI
  21. regulation of cell cycle Source: MGI
  22. regulation of centriole replication Source: MGI
  23. regulation of centrosome duplication Source: MGI
  24. regulation of DNA damage response, signal transduction by p53 class mediator Source: MGI
  25. regulation of eIF2 alpha phosphorylation by dsRNA Source: MGI
  26. regulation of endodeoxyribonuclease activity Source: MGI
  27. regulation of endoribonuclease activity Source: MGI
  28. ribosomal large subunit biogenesis Source: MGI
  29. ribosomal large subunit export from nucleus Source: MGI
  30. ribosomal small subunit biogenesis Source: MGI
  31. ribosomal small subunit export from nucleus Source: MGI
  32. rRNA export from nucleus Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
NucleophosminImported
Gene namesi
Name:Npm1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:106184. Npm1.

Subcellular locationi

GO - Cellular componenti

  1. centrosome Source: MGI
  2. cytoplasm Source: MGI
  3. cytosol Source: MGI
  4. focal adhesion Source: MGI
  5. granular component Source: MGI
  6. large ribosomal subunit Source: MGI
  7. membrane Source: MGI
  8. nuclear speck Source: MGI
  9. nucleolus Source: MGI
  10. nucleoplasm Source: MGI
  11. nucleus Source: MGI
  12. ribonucleoprotein complex Source: MGI
  13. small ribosomal subunit Source: MGI
  14. spindle pole centrosome Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ5SQB0.

Expressioni

Gene expression databases

ExpressionAtlasiQ5SQB0. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ5SQB0.
SMRiQ5SQB0. Positions 13-120, 195-264.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00440000034554.
HOGENOMiHOG000013061.
HOVERGENiHBG001860.

Family and domain databases

Gene3Di2.60.120.340. 1 hit.
InterProiIPR004301. Nucleoplasmin.
IPR024057. Nucleoplasmin_core_dom.
[Graphical view]
PANTHERiPTHR22747. PTHR22747. 1 hit.
SUPFAMiSSF69203. SSF69203. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SQB0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEDSMDMDMS PLRPQNYLFG CELKADKDYH FKVDNDENEH QLSLRTVSLG
60 70 80 90 100
AGAKDELHIV EAEAMNYEGS PIKVTLATLK MSVQPTVSLG GFEITPPVVL
110 120 130 140 150
RLKCGSGPVH ISGQHLVAVE EDAESEDEDE EDVKLLGMSG KRSAPGGGNK
160 170 180 190 200
VPQKKVKLDE DDEDDDEDDE DDEDDDDDDF DEEETEEKVP VKKGQESFKK
210 220 230 240 250
QEKTPKTPKG PSSVEDIKAK MQASIEKGGS LPKVEAKFIN YVKNCFRMTD
260
QEAIQDLWQW RKSL
Length:264
Mass (Da):29,525
Last modified:December 21, 2004 - v1
Checksum:i87C12DB1C92DAF58
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL772409 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000093201; ENSMUSP00000090891; ENSMUSG00000057113.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL772409 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliQ5SQB0.
SMRiQ5SQB0. Positions 13-120, 195-264.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ5SQB0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000093201; ENSMUSP00000090891; ENSMUSG00000057113.

Organism-specific databases

MGIiMGI:106184. Npm1.

Phylogenomic databases

GeneTreeiENSGT00440000034554.
HOGENOMiHOG000013061.
HOVERGENiHBG001860.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

ExpressionAtlasiQ5SQB0. baseline.

Family and domain databases

Gene3Di2.60.120.340. 1 hit.
InterProiIPR004301. Nucleoplasmin.
IPR024057. Nucleoplasmin_core_dom.
[Graphical view]
PANTHERiPTHR22747. PTHR22747. 1 hit.
SUPFAMiSSF69203. SSF69203. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comprehensive identification of phosphorylation sites in postsynaptic density preparations."
    Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L.
    Mol. Cell. Proteomics 5:914-922(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis."
    Zhou H., Ye M., Dong J., Han G., Jiang X., Wu R., Zou H.
    J. Proteome Res. 7:3957-3967(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. "Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry."
    Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J.
    Mol. Cell. Proteomics 8:904-912(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  7. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.
  8. "SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways."
    Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z., Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.
    Mol. Cell 50:919-930(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiQ5SQB0_MOUSE
AccessioniPrimary (citable) accession number: Q5SQB0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: February 4, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.