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Q5SMK6 (P2C54_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 54

Short name=OsPP2C54
EC=3.1.3.16
Gene names
Ordered Locus Names:Os06g0179700, LOC_Os06g08140
ORF Names:OSJNBa0035I03.20, OSJNBb0019L07.2
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length360 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 360360Probable protein phosphatase 2C 54
PRO_0000363301

Regions

Domain64 – 318255PP2C-like
Compositional bias18 – 247Poly-Ala

Sites

Metal binding1091Manganese 1 By similarity
Metal binding1091Manganese 2 By similarity
Metal binding1101Manganese 1; via carbonyl oxygen By similarity
Metal binding2731Manganese 2 By similarity
Metal binding3161Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5SMK6 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: B9CB2C51C2CEF3F9

FASTA36039,351
        10         20         30         40         50         60 
MCVEESEGAE RLDFGEPAAA AADAGKSKSK SPDELPSPRM ERVCENTTAA DFKQNKSGNF 

        70         80         90        100        110        120 
VPNIRSGDWS DIGGRQYMED THVCITDLAK NFGYQSVDNE AISFYGVFDG HGGKDAAHFV 

       130        140        150        160        170        180 
RDNLPRIIVE DADFPLELEK VVRRSFVHAD NQFAKTTLSS GTTALTAMIF GRTLLIANAG 

       190        200        210        220        230        240 
DCRAVLSRCG TAIEMSVDHR PCSLSEKLRV ESLGGYVDDG YLNGLLGVTR ALGDWHLEGM 

       250        260        270        280        290        300 
KEAGNPGGPL SAEPELKMIT LTKDDEFLII GSDGIWDVFS NQNVVDFARR RLQEHNDVKS 

       310        320        330        340        350        360 
CCREIVEEAI KRGATDNLTA VLVSFHLEAP PQVRVSRPGR VARSISAEGL NSLRTLLRNQ 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[4]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003019 Genomic DNA. Translation: BAD72302.1.
AP007257 Genomic DNA. Translation: BAD72550.1.
AP008212 Genomic DNA. Translation: BAF18885.1.
AK065602 mRNA. Translation: BAG89581.1.
RefSeqNP_001056971.1. NM_001063506.1.
UniGeneOs.17303.

3D structure databases

ProteinModelPortalQ5SMK6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS06T0179700-01; OS06T0179700-01; OS06G0179700.
GeneID4340303.
KEGGosa:4340303.

Organism-specific databases

GrameneQ5SMK6.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233896.
KOK14803.
OMAQYMEDTH.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
PROSITEPS01032. PP2C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP2C54_ORYSJ
AccessionPrimary (citable) accession number: Q5SMK6
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: December 21, 2004
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations