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Protein
Submitted name:

Transcriptional repressor, TetR family

Gene

TTHA0101

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-105-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional repressor, TetR familyImported
Gene namesi
Ordered Locus Names:TTHA0101Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA0101.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ANGX-ray2.25A/B/C/D2-205[»]
3ANPX-ray1.95A/B/C/D2-205[»]
ProteinModelPortaliQ5SM42.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SM42.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 6961HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41067SE. Bacteria.
ENOG410XUF9. LUCA.
HOGENOMiHOG000099689.
OMAiNRGFQET.
PhylomeDBiQ5SM42.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SM42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVREYQKKR RRERIFRAAM ELFRNRGFQE TTATEIAKAA HVSRGTFFNY
60 70 80 90 100
YPYKEAVLLD YGSQLLAGLR EEVRRLLAQG REPVEVLRHL FRVLAEGTAR
110 120 130 140 150
EKDLLLPMFY ELLNPDPVRA RAAFEALPLG DLIAEILKPL REQGVLRQDF
160 170 180 190 200
SLERMGRTLA DLYFLSALRW AAYTPGRDLA EELEKNLRLL LEGMLVREAP

APGGL
Length:205
Mass (Da):23,620
Last modified:December 21, 2004 - v1
Checksum:iB9D06F98547A4EF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD69924.1.
RefSeqiWP_011227711.1. NC_006461.1.
YP_143367.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD69924; BAD69924; BAD69924.
GeneIDi3169201.
KEGGittj:TTHA0101.
PATRICi23955133. VBITheThe93045_0099.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD69924.1.
RefSeqiWP_011227711.1. NC_006461.1.
YP_143367.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ANGX-ray2.25A/B/C/D2-205[»]
3ANPX-ray1.95A/B/C/D2-205[»]
ProteinModelPortaliQ5SM42.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA0101.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD69924; BAD69924; BAD69924.
GeneIDi3169201.
KEGGittj:TTHA0101.
PATRICi23955133. VBITheThe93045_0099.

Phylogenomic databases

eggNOGiENOG41067SE. Bacteria.
ENOG410XUF9. LUCA.
HOGENOMiHOG000099689.
OMAiNRGFQET.
PhylomeDBiQ5SM42.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-105-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5SM42.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SM42_THET8
AccessioniPrimary (citable) accession number: Q5SM42
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: September 7, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.