Q5SLX6 (Q5SLX6_THET8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator (TetR/AcrR family) EMBL BAD69990.1

Gene names

Ordered Locus Names:

TTHA0167 EMBL BAD69990.1

Organism

Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) [Reference proteome] [HAMAP] EMBL BAD69990.1

Taxonomic identifier

300852 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus › Thermus thermophilus

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. RuleBase RU000710 SAAS SAAS001647

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000710 SAAS SAAS001647
Ligand	DNA-binding RuleBase RU000710 SAAS SAAS001647
Technical term	3D-structure PDB 3VUQ Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5SLX6 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: 866293AAC6B44D1F	FASTA	189	21,539
	10 20 30 40 50 60 MAAMITPPGA GVKDKKRAIL EATLAVLRER GLSGLKMEEV ARRAEVGKGT IYLYFRDKRD 70 80 90 100 110 120 LLKALVEERT WAFYREVEEV VRRKAPFFVR LEEVLRRRLA WVQEWRGLWA AVAREAMDDP 130 140 150 160 170 180 TPWLKGLHEH YLRLLEELLR SGQSEGAVRT GLSPRATAAV IAAMGCTPSL EVEAYLEHLM EVLRKGVEP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Thermus thermophilus HB8." Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S. Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HB8 / ATCC 27634 / DSM 579.
[2]	"Structure and function of a TetR family transcriptional regulator, SbtR, from Thermus thermophilus HB8." Agari Y., Sakamoto K., Yutani K., Kuramitsu S., Shinkai A. Proteins 0:0-0(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS) OF 3-189.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AP008226 Genomic DNA. Translation: BAD69990.1.

RefSeq

YP_143433.1. NC_006461.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3VUQ	X-ray	2.05	A/B/C/D	3-189	[»]

ProteinModelPortal

Q5SLX6.

ModBase

Search...

Protein-protein interaction databases

STRING

300852.TTHA0167.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

BAD69990; BAD69990; BAD69990.

GeneID

3169667.

KEGG

ttj:TTHA0167.

PATRIC

23955275. VBITheThe93045_0165.

Phylogenomic databases

eggNOG

NOG308430.

HOGENOM

HOG000105151.

OMA

SEIAEMA.

ProtClustDB

CLSK738943.

Family and domain databases

Gene3D

1.10.357.10. 1 hit.

InterPro

IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]

Pfam

PF00440. TetR_N. 1 hit.
[Graphical view]

PRINTS

PR00455. HTHTETR.

SUPFAM

SSF46689. Homeodomain_like. 1 hit.
SSF48498. TetR_like_C. 1 hit.

PROSITE

PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q5SLX6_THET8

Accession

Primary (citable) accession number: Q5SLX6

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)