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Q5SLX6

- Q5SLX6_THET8

UniProt

Q5SLX6 - Q5SLX6_THET8

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Protein
Submitted name: Transcriptional regulator (TetR/AcrR family)
Gene
TTHA0167
Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotations

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-176-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator (TetR/AcrR family)Imported
Gene namesi
Ordered Locus Names:TTHA0167Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA0167.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VUQX-ray2.05A/B/C/D3-189[»]
ProteinModelPortaliQ5SLX6.

Family & Domainsi

Sequence similaritiesi

Contains HTH tetR-type DNA-binding domain.SAAS annotations

Phylogenomic databases

eggNOGiNOG308430.
HOGENOMiHOG000105151.
OMAiSEIAEMA.
OrthoDBiEOG6PP9N1.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SLX6-1 [UniParc]FASTAAdd to Basket

« Hide

MAAMITPPGA GVKDKKRAIL EATLAVLRER GLSGLKMEEV ARRAEVGKGT    50
IYLYFRDKRD LLKALVEERT WAFYREVEEV VRRKAPFFVR LEEVLRRRLA 100
WVQEWRGLWA AVAREAMDDP TPWLKGLHEH YLRLLEELLR SGQSEGAVRT 150
GLSPRATAAV IAAMGCTPSL EVEAYLEHLM EVLRKGVEP 189
Length:189
Mass (Da):21,539
Last modified:December 21, 2004 - v1
Checksum:i866293AAC6B44D1F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD69990.1.
RefSeqiWP_011174174.1. NC_006461.1.
YP_143433.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD69990; BAD69990; BAD69990.
GeneIDi3169667.
KEGGittj:TTHA0167.
PATRICi23955275. VBITheThe93045_0165.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD69990.1 .
RefSeqi WP_011174174.1. NC_006461.1.
YP_143433.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3VUQ X-ray 2.05 A/B/C/D 3-189 [» ]
ProteinModelPortali Q5SLX6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 300852.TTHA0167.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD69990 ; BAD69990 ; BAD69990 .
GeneIDi 3169667.
KEGGi ttj:TTHA0167.
PATRICi 23955275. VBITheThe93045_0165.

Phylogenomic databases

eggNOGi NOG308430.
HOGENOMi HOG000105151.
OMAi SEIAEMA.
OrthoDBi EOG6PP9N1.

Enzyme and pathway databases

BioCyci TTHE300852:GH8R-176-MONOMER.

Family and domain databases

Gene3Di 1.10.357.10. 1 hit.
InterProi IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view ]
Pfami PF00440. TetR_N. 1 hit.
[Graphical view ]
PRINTSi PR00455. HTHTETR.
SUPFAMi SSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEi PS50977. HTH_TETR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  2. "Structure and function of a TetR family transcriptional regulator, SbtR, from thermus thermophilus HB8."
    Agari Y., Sakamoto K., Yutani K., Kuramitsu S., Shinkai A.
    Proteins 81:1166-1178(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS) OF 3-189.

Entry informationi

Entry nameiQ5SLX6_THET8
AccessioniPrimary (citable) accession number: Q5SLX6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: September 3, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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