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Q5SLX6 (Q5SLX6_THET8) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TTHA0167 EMBL BAD69990.1
OrganismThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) [Reference proteome] [HAMAP] EMBL BAD69990.1
Taxonomic identifier300852 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length189 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. RuleBase RU000710

Contains HTH tetR-type DNA-binding domain. SAAS SAAS001647

Sequences

Sequence LengthMass (Da)Tools
Q5SLX6 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 866293AAC6B44D1F

FASTA18921,539
        10         20         30         40         50         60 
MAAMITPPGA GVKDKKRAIL EATLAVLRER GLSGLKMEEV ARRAEVGKGT IYLYFRDKRD 

        70         80         90        100        110        120 
LLKALVEERT WAFYREVEEV VRRKAPFFVR LEEVLRRRLA WVQEWRGLWA AVAREAMDDP 

       130        140        150        160        170        180 
TPWLKGLHEH YLRLLEELLR SGQSEGAVRT GLSPRATAAV IAAMGCTPSL EVEAYLEHLM 


EVLRKGVEP 

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References

« Hide 'large scale' references
[1]"Complete genome sequence of Thermus thermophilus HB8."
Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HB8 / ATCC 27634 / DSM 579.
[2]"Structure and function of a TetR family transcriptional regulator, SbtR, from thermus thermophilus HB8."
Agari Y., Sakamoto K., Yutani K., Kuramitsu S., Shinkai A.
Proteins 81:1166-1178(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS) OF 3-189.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008226 Genomic DNA. Translation: BAD69990.1.
RefSeqYP_143433.1. NC_006461.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VUQX-ray2.05A/B/C/D3-189[»]
ProteinModelPortalQ5SLX6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING300852.TTHA0167.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD69990; BAD69990; BAD69990.
GeneID3169667.
KEGGttj:TTHA0167.
PATRIC23955275. VBITheThe93045_0165.

Phylogenomic databases

eggNOGNOG308430.
HOGENOMHOG000105151.
OMAIINEEVD.
OrthoDBEOG6PP9N1.
ProtClustDBCLSK738943.

Enzyme and pathway databases

BioCycTTHE300852:GH8R-176-MONOMER.

Family and domain databases

Gene3D1.10.357.10. 1 hit.
InterProIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSPR00455. HTHTETR.
SUPFAMSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5SLX6_THET8
AccessionPrimary (citable) accession number: Q5SLX6
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: February 19, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)