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Q5SLX6

- Q5SLX6_THET8

UniProt

Q5SLX6 - Q5SLX6_THET8

Protein
Submitted name:

Transcriptional regulator (TetR/AcrR family)

Gene

TTHA0167

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-176-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator (TetR/AcrR family)Imported
    Gene namesi
    Ordered Locus Names:TTHA0167Imported
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi300852.TTHA0167.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3VUQX-ray2.05A/B/C/D3-189[»]
    ProteinModelPortaliQ5SLX6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation
    Contains HTH tetR-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiNOG308430.
    HOGENOMiHOG000105151.
    OMAiSEIAEMA.
    OrthoDBiEOG6PP9N1.

    Family and domain databases

    Gene3Di1.10.357.10. 1 hit.
    InterProiIPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    IPR011075. Tet_transcr_reg_TetR-rel_C.
    [Graphical view]
    PfamiPF00440. TetR_N. 1 hit.
    [Graphical view]
    PRINTSiPR00455. HTHTETR.
    SUPFAMiSSF46689. SSF46689. 1 hit.
    SSF48498. SSF48498. 1 hit.
    PROSITEiPS50977. HTH_TETR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5SLX6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAMITPPGA GVKDKKRAIL EATLAVLRER GLSGLKMEEV ARRAEVGKGT    50
    IYLYFRDKRD LLKALVEERT WAFYREVEEV VRRKAPFFVR LEEVLRRRLA 100
    WVQEWRGLWA AVAREAMDDP TPWLKGLHEH YLRLLEELLR SGQSEGAVRT 150
    GLSPRATAAV IAAMGCTPSL EVEAYLEHLM EVLRKGVEP 189
    Length:189
    Mass (Da):21,539
    Last modified:December 21, 2004 - v1
    Checksum:i866293AAC6B44D1F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD69990.1.
    RefSeqiWP_011174174.1. NC_006461.1.
    YP_143433.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD69990; BAD69990; BAD69990.
    GeneIDi3169667.
    KEGGittj:TTHA0167.
    PATRICi23955275. VBITheThe93045_0165.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD69990.1 .
    RefSeqi WP_011174174.1. NC_006461.1.
    YP_143433.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3VUQ X-ray 2.05 A/B/C/D 3-189 [» ]
    ProteinModelPortali Q5SLX6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA0167.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD69990 ; BAD69990 ; BAD69990 .
    GeneIDi 3169667.
    KEGGi ttj:TTHA0167.
    PATRICi 23955275. VBITheThe93045_0165.

    Phylogenomic databases

    eggNOGi NOG308430.
    HOGENOMi HOG000105151.
    OMAi SEIAEMA.
    OrthoDBi EOG6PP9N1.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-176-MONOMER.

    Family and domain databases

    Gene3Di 1.10.357.10. 1 hit.
    InterProi IPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    IPR011075. Tet_transcr_reg_TetR-rel_C.
    [Graphical view ]
    Pfami PF00440. TetR_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00455. HTHTETR.
    SUPFAMi SSF46689. SSF46689. 1 hit.
    SSF48498. SSF48498. 1 hit.
    PROSITEi PS50977. HTH_TETR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579Imported.
    2. "Structure and function of a TetR family transcriptional regulator, SbtR, from thermus thermophilus HB8."
      Agari Y., Sakamoto K., Yutani K., Kuramitsu S., Shinkai A.
      Proteins 81:1166-1178(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS) OF 3-189.

    Entry informationi

    Entry nameiQ5SLX6_THET8
    AccessioniPrimary (citable) accession number: Q5SLX6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 21, 2004
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3