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Q5SLQ0

- RS18_THET8

UniProt

Q5SLQ0 - RS18_THET8

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Protein

30S ribosomal protein S18

Gene
rpsR, TTHA0243
Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Located on the back of the platform of the 30S subunit where it stabilizes the close packing of several RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it probably interacts with the Shine-Dalgarno helix.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-252-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S18
Gene namesi
Name:rpsR
Ordered Locus Names:TTHA0243
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 888730S ribosomal protein S18UniRule annotationPRO_0000111250Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6, also interacts with protein S11. Binds to the C-terminus of IF3 and to the central section of Era.10 Publications

Protein-protein interaction databases

STRINGi300852.TTHA0243.

Structurei

Secondary structure

1
88
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni22 – 243
Beta strandi28 – 303
Helixi37 – 426
Turni45 – 473
Helixi53 – 564
Beta strandi59 – 613
Helixi62 – 7615
Beta strandi77 – 793
Beta strandi85 – 873

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00R1-88[»]
1FKAX-ray3.30R1-88[»]
1G1XX-ray2.60C/H1-88[»]
1GIXX-ray5.50U1-88[»]
1HNWX-ray3.40R1-88[»]
1HNXX-ray3.40R1-88[»]
1HNZX-ray3.30R1-88[»]
1HR0X-ray3.20R1-88[»]
1I94X-ray3.20R2-88[»]
1I95X-ray4.50R2-88[»]
1I96X-ray4.20R2-88[»]
1I97X-ray4.50R2-88[»]
1IBKX-ray3.31R1-88[»]
1IBLX-ray3.11R1-88[»]
1IBMX-ray3.31R1-88[»]
1J5EX-ray3.05R1-88[»]
1JGOX-ray5.60U1-88[»]
1JGPX-ray7.00U1-88[»]
1JGQX-ray5.00U1-88[»]
1L1Umodel-R16-88[»]
1ML5electron microscopy14.00U1-88[»]
1N32X-ray3.00R1-88[»]
1N33X-ray3.35R1-88[»]
1N34X-ray3.80R1-88[»]
1N36X-ray3.65R1-88[»]
1PNSX-ray8.70R16-88[»]
1PNXX-ray9.50R16-88[»]
1VOQX-ray11.50R16-88[»]
1VOSX-ray11.50R16-88[»]
1VOXX-ray11.50R16-88[»]
1X18electron microscopy13.50H16-88[»]
1XMOX-ray3.25R1-88[»]
1XMQX-ray3.00R1-88[»]
1XNQX-ray3.05R1-88[»]
1XNRX-ray3.10R1-88[»]
1YL4X-ray5.50U1-88[»]
2B64X-ray5.90R1-88[»]
2B9MX-ray6.76R1-88[»]
2B9OX-ray6.46R1-88[»]
2E5LX-ray3.30R2-88[»]
2F4VX-ray3.80R1-88[»]
2HGIX-ray5.00U1-88[»]
2HGPX-ray5.50U1-88[»]
2HGRX-ray4.51U1-88[»]
2HHHX-ray3.35R1-88[»]
2J00X-ray2.80R2-88[»]
2J02X-ray2.80R2-88[»]
2OW8X-ray3.71s1-88[»]
2UU9X-ray3.10R2-88[»]
2UUAX-ray2.90R2-88[»]
2UUBX-ray2.80R2-88[»]
2UUCX-ray3.10R2-88[»]
2UXBX-ray3.10R2-88[»]
2UXCX-ray2.90R2-88[»]
2UXDX-ray3.20R2-88[»]
2V46X-ray3.50R2-88[»]
2V48X-ray3.50R2-88[»]
2WDGX-ray3.30R1-88[»]
2WDHX-ray3.30R1-88[»]
2WDKX-ray3.50R1-88[»]
2WDMX-ray3.50R1-88[»]
2WH1X-ray3.45R1-88[»]
2WH3X-ray3.45R1-88[»]
2WRIX-ray3.60R1-88[»]
2WRKX-ray3.60R1-88[»]
2WRNX-ray3.60R1-88[»]
2WRQX-ray3.60R1-88[»]
2X9RX-ray3.10R1-88[»]
2X9TX-ray3.10R1-88[»]
2XFZX-ray3.20R1-88[»]
2XG1X-ray3.20R1-88[»]
2XQDX-ray3.10R1-88[»]
2XSYelectron microscopy7.80R1-88[»]
2XUYelectron microscopy7.60R1-88[»]
2Y0UX-ray3.10R1-88[»]
2Y0WX-ray3.10R1-88[»]
2Y0YX-ray3.10R1-88[»]
2Y10X-ray3.10R1-88[»]
2Y12X-ray3.10R1-88[»]
2Y14X-ray3.10R1-88[»]
2Y16X-ray3.10R1-88[»]
2Y18X-ray3.10R1-88[»]
2ZM6X-ray3.30R2-88[»]
3FICelectron microscopy6.40R19-88[»]
3HUWX-ray3.10R1-88[»]
3HUYX-ray3.10R1-88[»]
3I8GX-ray3.10U1-88[»]
3I8HX-ray3.10U1-88[»]
3I9BX-ray3.50U1-88[»]
3I9DX-ray3.50U1-88[»]
3KIQX-ray3.30r1-88[»]
3KISX-ray3.30r1-88[»]
3KIUX-ray3.60r1-88[»]
3KIXX-ray3.60r1-88[»]
3KNHX-ray3.00R1-88[»]
3KNJX-ray3.15R1-88[»]
3KNLX-ray3.45R1-88[»]
3KNNX-ray3.45R1-88[»]
3OGEX-ray3.00R1-88[»]
3OGYX-ray3.00R1-88[»]
3OHCX-ray3.00R1-88[»]
3OHDX-ray3.00R1-88[»]
3OHYX-ray3.00R1-88[»]
3OI0X-ray3.00R1-88[»]
3OI2X-ray3.10R1-88[»]
3OI4X-ray3.10R1-88[»]
3OTOX-ray3.69R1-88[»]
3T1HX-ray3.11R1-88[»]
3T1YX-ray2.80R1-88[»]
3TVFX-ray3.10U1-88[»]
3TVGX-ray3.10U1-88[»]
3UXSX-ray3.20R1-88[»]
3UXTX-ray3.20R1-88[»]
3UYDX-ray3.00U1-88[»]
3UYFX-ray3.00U1-88[»]
3UZ3X-ray3.30U1-88[»]
3UZ4X-ray3.30U1-88[»]
3UZ6X-ray3.00U1-88[»]
3UZ7X-ray3.00U1-88[»]
3UZGX-ray3.30U1-88[»]
3UZIX-ray3.30U1-88[»]
3UZLX-ray3.30U1-88[»]
3UZMX-ray3.30U1-88[»]
3V22X-ray3.00R1-88[»]
3V24X-ray3.00R1-88[»]
3V26X-ray3.10R1-88[»]
3V28X-ray3.10R1-88[»]
3V2CX-ray2.70R1-88[»]
3V2EX-ray2.70R1-88[»]
3V6UX-ray3.90R1-88[»]
3V6VX-ray3.90R1-88[»]
3ZN7X-ray3.10R1-88[»]
3ZNDX-ray3.10R1-88[»]
3ZVOX-ray3.80R1-88[»]
4ABRX-ray3.10R1-88[»]
4AQYX-ray3.50R1-88[»]
4B3MX-ray2.90R1-88[»]
4B3RX-ray3.00R1-88[»]
4B3SX-ray3.15R1-88[»]
4B3TX-ray3.00R1-88[»]
4B8FX-ray3.70R1-88[»]
4B8HX-ray3.70R1-88[»]
4BYBX-ray3.35R1-88[»]
4BYDX-ray3.35R1-88[»]
4CR1X-ray2.95R1-88[»]
4DH9X-ray3.20R1-88[»]
4DHBX-ray3.20R1-88[»]
4DR1X-ray3.60R1-88[»]
4DR2X-ray3.25R1-88[»]
4DR3X-ray3.35R1-88[»]
4DR4X-ray3.97R1-88[»]
4DR5X-ray3.45R1-88[»]
4DR6X-ray3.30R1-88[»]
4DR7X-ray3.75R1-88[»]
4DUYX-ray3.39R1-88[»]
4DUZX-ray3.65R1-88[»]
4DV0X-ray3.85R1-88[»]
4DV1X-ray3.85R1-88[»]
4DV2X-ray3.65R1-88[»]
4DV3X-ray3.55R1-88[»]
4DV4X-ray3.65R1-88[»]
4DV5X-ray3.68R1-88[»]
4DV6X-ray3.30R1-88[»]
4DV7X-ray3.29R1-88[»]
4EJ9X-ray3.52R1-88[»]
4EJAX-ray3.52R1-88[»]
4G5KX-ray3.30U1-88[»]
4G5MX-ray3.30U1-88[»]
4G5TX-ray3.10U1-88[»]
4G5VX-ray3.10U1-88[»]
4GKJX-ray3.30R16-88[»]
4GKKX-ray3.20R16-88[»]
4JI0X-ray3.49R1-88[»]
4JI1X-ray3.14R1-88[»]
4JI2X-ray3.64R1-88[»]
4JI3X-ray3.35R1-88[»]
4JI4X-ray3.69R1-88[»]
4JI5X-ray3.85R1-88[»]
4JI6X-ray3.55R1-88[»]
4JI7X-ray3.50R1-88[»]
4JI8X-ray3.74R1-88[»]
4JUWX-ray2.86R19-88[»]
4JV5X-ray3.16R19-88[»]
4JYAX-ray3.10R19-88[»]
4K0KX-ray3.40R19-88[»]
4K0LX-ray3.30R19-88[»]
4K0PX-ray3.30R19-88[»]
4KHPX-ray3.10R19-88[»]
4NVUX-ray3.00R1-88[»]
4NVWX-ray3.00R1-88[»]
4NVYX-ray3.10R1-88[»]
4NW0X-ray3.10R1-88[»]
4NXMX-ray3.65R1-88[»]
4NXNX-ray3.54R1-88[»]
4OX9X-ray3.80R1-88[»]
ProteinModelPortaliQ5SLQ0.
SMRiQ5SLQ0. Positions 8-88.

Miscellaneous databases

EvolutionaryTraceiQ5SLQ0.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0238.
HOGENOMiHOG000218466.
KOiK02963.
OMAiMSNRANP.
OrthoDBiEOG6PCQ4R.
PhylomeDBiQ5SLQ0.

Family and domain databases

Gene3Di4.10.640.10. 1 hit.
HAMAPiMF_00270. Ribosomal_S18.
InterProiIPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
[Graphical view]
PANTHERiPTHR13479. PTHR13479. 1 hit.
PfamiPF01084. Ribosomal_S18. 1 hit.
[Graphical view]
PRINTSiPR00974. RIBOSOMALS18.
ProDomiPD002239. Ribosomal_S18. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46911. SSF46911. 1 hit.
TIGRFAMsiTIGR00165. S18. 1 hit.
PROSITEiPS00057. RIBOSOMAL_S18. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5SLQ0-1 [UniParc]FASTAAdd to Basket

« Hide

MSTKNAKPKK EAQRRPSRKA KVKATLGEFD LRDYRNVEVL KRFLSETGKI   50
LPRRRTGLSA KEQRILAKTI KRARILGLLP FTEKLVRK 88
Length:88
Mass (Da):10,231
Last modified:January 23, 2007 - v3
Checksum:iCFDE7AC4953EF809
GO

Mass spectrometryi

Molecular mass is 10101 Da from positions 2 - 88. Determined by MALDI. 1 Publication

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti17 – 171S → T AA sequence 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD70066.1.
RefSeqiYP_143509.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD70066; BAD70066; BAD70066.
GeneIDi3169870.
KEGGittj:TTHA0243.
PATRICi23955431. VBITheThe93045_0243.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD70066.1 .
RefSeqi YP_143509.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1FJG X-ray 3.00 R 1-88 [» ]
1FKA X-ray 3.30 R 1-88 [» ]
1G1X X-ray 2.60 C/H 1-88 [» ]
1GIX X-ray 5.50 U 1-88 [» ]
1HNW X-ray 3.40 R 1-88 [» ]
1HNX X-ray 3.40 R 1-88 [» ]
1HNZ X-ray 3.30 R 1-88 [» ]
1HR0 X-ray 3.20 R 1-88 [» ]
1I94 X-ray 3.20 R 2-88 [» ]
1I95 X-ray 4.50 R 2-88 [» ]
1I96 X-ray 4.20 R 2-88 [» ]
1I97 X-ray 4.50 R 2-88 [» ]
1IBK X-ray 3.31 R 1-88 [» ]
1IBL X-ray 3.11 R 1-88 [» ]
1IBM X-ray 3.31 R 1-88 [» ]
1J5E X-ray 3.05 R 1-88 [» ]
1JGO X-ray 5.60 U 1-88 [» ]
1JGP X-ray 7.00 U 1-88 [» ]
1JGQ X-ray 5.00 U 1-88 [» ]
1L1U model - R 16-88 [» ]
1ML5 electron microscopy 14.00 U 1-88 [» ]
1N32 X-ray 3.00 R 1-88 [» ]
1N33 X-ray 3.35 R 1-88 [» ]
1N34 X-ray 3.80 R 1-88 [» ]
1N36 X-ray 3.65 R 1-88 [» ]
1PNS X-ray 8.70 R 16-88 [» ]
1PNX X-ray 9.50 R 16-88 [» ]
1VOQ X-ray 11.50 R 16-88 [» ]
1VOS X-ray 11.50 R 16-88 [» ]
1VOX X-ray 11.50 R 16-88 [» ]
1X18 electron microscopy 13.50 H 16-88 [» ]
1XMO X-ray 3.25 R 1-88 [» ]
1XMQ X-ray 3.00 R 1-88 [» ]
1XNQ X-ray 3.05 R 1-88 [» ]
1XNR X-ray 3.10 R 1-88 [» ]
1YL4 X-ray 5.50 U 1-88 [» ]
2B64 X-ray 5.90 R 1-88 [» ]
2B9M X-ray 6.76 R 1-88 [» ]
2B9O X-ray 6.46 R 1-88 [» ]
2E5L X-ray 3.30 R 2-88 [» ]
2F4V X-ray 3.80 R 1-88 [» ]
2HGI X-ray 5.00 U 1-88 [» ]
2HGP X-ray 5.50 U 1-88 [» ]
2HGR X-ray 4.51 U 1-88 [» ]
2HHH X-ray 3.35 R 1-88 [» ]
2J00 X-ray 2.80 R 2-88 [» ]
2J02 X-ray 2.80 R 2-88 [» ]
2OW8 X-ray 3.71 s 1-88 [» ]
2UU9 X-ray 3.10 R 2-88 [» ]
2UUA X-ray 2.90 R 2-88 [» ]
2UUB X-ray 2.80 R 2-88 [» ]
2UUC X-ray 3.10 R 2-88 [» ]
2UXB X-ray 3.10 R 2-88 [» ]
2UXC X-ray 2.90 R 2-88 [» ]
2UXD X-ray 3.20 R 2-88 [» ]
2V46 X-ray 3.50 R 2-88 [» ]
2V48 X-ray 3.50 R 2-88 [» ]
2WDG X-ray 3.30 R 1-88 [» ]
2WDH X-ray 3.30 R 1-88 [» ]
2WDK X-ray 3.50 R 1-88 [» ]
2WDM X-ray 3.50 R 1-88 [» ]
2WH1 X-ray 3.45 R 1-88 [» ]
2WH3 X-ray 3.45 R 1-88 [» ]
2WRI X-ray 3.60 R 1-88 [» ]
2WRK X-ray 3.60 R 1-88 [» ]
2WRN X-ray 3.60 R 1-88 [» ]
2WRQ X-ray 3.60 R 1-88 [» ]
2X9R X-ray 3.10 R 1-88 [» ]
2X9T X-ray 3.10 R 1-88 [» ]
2XFZ X-ray 3.20 R 1-88 [» ]
2XG1 X-ray 3.20 R 1-88 [» ]
2XQD X-ray 3.10 R 1-88 [» ]
2XSY electron microscopy 7.80 R 1-88 [» ]
2XUY electron microscopy 7.60 R 1-88 [» ]
2Y0U X-ray 3.10 R 1-88 [» ]
2Y0W X-ray 3.10 R 1-88 [» ]
2Y0Y X-ray 3.10 R 1-88 [» ]
2Y10 X-ray 3.10 R 1-88 [» ]
2Y12 X-ray 3.10 R 1-88 [» ]
2Y14 X-ray 3.10 R 1-88 [» ]
2Y16 X-ray 3.10 R 1-88 [» ]
2Y18 X-ray 3.10 R 1-88 [» ]
2ZM6 X-ray 3.30 R 2-88 [» ]
3FIC electron microscopy 6.40 R 19-88 [» ]
3HUW X-ray 3.10 R 1-88 [» ]
3HUY X-ray 3.10 R 1-88 [» ]
3I8G X-ray 3.10 U 1-88 [» ]
3I8H X-ray 3.10 U 1-88 [» ]
3I9B X-ray 3.50 U 1-88 [» ]
3I9D X-ray 3.50 U 1-88 [» ]
3KIQ X-ray 3.30 r 1-88 [» ]
3KIS X-ray 3.30 r 1-88 [» ]
3KIU X-ray 3.60 r 1-88 [» ]
3KIX X-ray 3.60 r 1-88 [» ]
3KNH X-ray 3.00 R 1-88 [» ]
3KNJ X-ray 3.15 R 1-88 [» ]
3KNL X-ray 3.45 R 1-88 [» ]
3KNN X-ray 3.45 R 1-88 [» ]
3OGE X-ray 3.00 R 1-88 [» ]
3OGY X-ray 3.00 R 1-88 [» ]
3OHC X-ray 3.00 R 1-88 [» ]
3OHD X-ray 3.00 R 1-88 [» ]
3OHY X-ray 3.00 R 1-88 [» ]
3OI0 X-ray 3.00 R 1-88 [» ]
3OI2 X-ray 3.10 R 1-88 [» ]
3OI4 X-ray 3.10 R 1-88 [» ]
3OTO X-ray 3.69 R 1-88 [» ]
3T1H X-ray 3.11 R 1-88 [» ]
3T1Y X-ray 2.80 R 1-88 [» ]
3TVF X-ray 3.10 U 1-88 [» ]
3TVG X-ray 3.10 U 1-88 [» ]
3UXS X-ray 3.20 R 1-88 [» ]
3UXT X-ray 3.20 R 1-88 [» ]
3UYD X-ray 3.00 U 1-88 [» ]
3UYF X-ray 3.00 U 1-88 [» ]
3UZ3 X-ray 3.30 U 1-88 [» ]
3UZ4 X-ray 3.30 U 1-88 [» ]
3UZ6 X-ray 3.00 U 1-88 [» ]
3UZ7 X-ray 3.00 U 1-88 [» ]
3UZG X-ray 3.30 U 1-88 [» ]
3UZI X-ray 3.30 U 1-88 [» ]
3UZL X-ray 3.30 U 1-88 [» ]
3UZM X-ray 3.30 U 1-88 [» ]
3V22 X-ray 3.00 R 1-88 [» ]
3V24 X-ray 3.00 R 1-88 [» ]
3V26 X-ray 3.10 R 1-88 [» ]
3V28 X-ray 3.10 R 1-88 [» ]
3V2C X-ray 2.70 R 1-88 [» ]
3V2E X-ray 2.70 R 1-88 [» ]
3V6U X-ray 3.90 R 1-88 [» ]
3V6V X-ray 3.90 R 1-88 [» ]
3ZN7 X-ray 3.10 R 1-88 [» ]
3ZND X-ray 3.10 R 1-88 [» ]
3ZVO X-ray 3.80 R 1-88 [» ]
4ABR X-ray 3.10 R 1-88 [» ]
4AQY X-ray 3.50 R 1-88 [» ]
4B3M X-ray 2.90 R 1-88 [» ]
4B3R X-ray 3.00 R 1-88 [» ]
4B3S X-ray 3.15 R 1-88 [» ]
4B3T X-ray 3.00 R 1-88 [» ]
4B8F X-ray 3.70 R 1-88 [» ]
4B8H X-ray 3.70 R 1-88 [» ]
4BYB X-ray 3.35 R 1-88 [» ]
4BYD X-ray 3.35 R 1-88 [» ]
4CR1 X-ray 2.95 R 1-88 [» ]
4DH9 X-ray 3.20 R 1-88 [» ]
4DHB X-ray 3.20 R 1-88 [» ]
4DR1 X-ray 3.60 R 1-88 [» ]
4DR2 X-ray 3.25 R 1-88 [» ]
4DR3 X-ray 3.35 R 1-88 [» ]
4DR4 X-ray 3.97 R 1-88 [» ]
4DR5 X-ray 3.45 R 1-88 [» ]
4DR6 X-ray 3.30 R 1-88 [» ]
4DR7 X-ray 3.75 R 1-88 [» ]
4DUY X-ray 3.39 R 1-88 [» ]
4DUZ X-ray 3.65 R 1-88 [» ]
4DV0 X-ray 3.85 R 1-88 [» ]
4DV1 X-ray 3.85 R 1-88 [» ]
4DV2 X-ray 3.65 R 1-88 [» ]
4DV3 X-ray 3.55 R 1-88 [» ]
4DV4 X-ray 3.65 R 1-88 [» ]
4DV5 X-ray 3.68 R 1-88 [» ]
4DV6 X-ray 3.30 R 1-88 [» ]
4DV7 X-ray 3.29 R 1-88 [» ]
4EJ9 X-ray 3.52 R 1-88 [» ]
4EJA X-ray 3.52 R 1-88 [» ]
4G5K X-ray 3.30 U 1-88 [» ]
4G5M X-ray 3.30 U 1-88 [» ]
4G5T X-ray 3.10 U 1-88 [» ]
4G5V X-ray 3.10 U 1-88 [» ]
4GKJ X-ray 3.30 R 16-88 [» ]
4GKK X-ray 3.20 R 16-88 [» ]
4JI0 X-ray 3.49 R 1-88 [» ]
4JI1 X-ray 3.14 R 1-88 [» ]
4JI2 X-ray 3.64 R 1-88 [» ]
4JI3 X-ray 3.35 R 1-88 [» ]
4JI4 X-ray 3.69 R 1-88 [» ]
4JI5 X-ray 3.85 R 1-88 [» ]
4JI6 X-ray 3.55 R 1-88 [» ]
4JI7 X-ray 3.50 R 1-88 [» ]
4JI8 X-ray 3.74 R 1-88 [» ]
4JUW X-ray 2.86 R 19-88 [» ]
4JV5 X-ray 3.16 R 19-88 [» ]
4JYA X-ray 3.10 R 19-88 [» ]
4K0K X-ray 3.40 R 19-88 [» ]
4K0L X-ray 3.30 R 19-88 [» ]
4K0P X-ray 3.30 R 19-88 [» ]
4KHP X-ray 3.10 R 19-88 [» ]
4NVU X-ray 3.00 R 1-88 [» ]
4NVW X-ray 3.00 R 1-88 [» ]
4NVY X-ray 3.10 R 1-88 [» ]
4NW0 X-ray 3.10 R 1-88 [» ]
4NXM X-ray 3.65 R 1-88 [» ]
4NXN X-ray 3.54 R 1-88 [» ]
4OX9 X-ray 3.80 R 1-88 [» ]
ProteinModelPortali Q5SLQ0.
SMRi Q5SLQ0. Positions 8-88.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 300852.TTHA0243.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD70066 ; BAD70066 ; BAD70066 .
GeneIDi 3169870.
KEGGi ttj:TTHA0243.
PATRICi 23955431. VBITheThe93045_0243.

Phylogenomic databases

eggNOGi COG0238.
HOGENOMi HOG000218466.
KOi K02963.
OMAi MSNRANP.
OrthoDBi EOG6PCQ4R.
PhylomeDBi Q5SLQ0.

Enzyme and pathway databases

BioCyci TTHE300852:GH8R-252-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q5SLQ0.

Family and domain databases

Gene3Di 4.10.640.10. 1 hit.
HAMAPi MF_00270. Ribosomal_S18.
InterProi IPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
[Graphical view ]
PANTHERi PTHR13479. PTHR13479. 1 hit.
Pfami PF01084. Ribosomal_S18. 1 hit.
[Graphical view ]
PRINTSi PR00974. RIBOSOMALS18.
ProDomi PD002239. Ribosomal_S18. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF46911. SSF46911. 1 hit.
TIGRFAMsi TIGR00165. S18. 1 hit.
PROSITEi PS00057. RIBOSOMAL_S18. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  2. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-26.
  3. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  4. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  5. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  6. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  7. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain."
    Agalarov S.C., Prasad G.S., Funke P.M., Stout C.D., Williamson J.R.
    Science 288:107-113(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF A 30S SUBUNIT FRAGMENT.
  9. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  10. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  11. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  12. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  13. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  14. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  15. "Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly."
    Sharma M.R., Barat C., Wilson D.N., Booth T.M., Kawazoe M., Hori-Takemoto C., Shirouzu M., Yokoyama S., Fucini P., Agrawal R.K.
    Mol. Cell 18:319-329(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (13.50 ANGSTROMS), INTERACTION WITH ERA.

Entry informationi

Entry nameiRS18_THET8
AccessioniPrimary (citable) accession number: Q5SLQ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 93 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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