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Q5SLQ0

- RS18_THET8

UniProt

Q5SLQ0 - RS18_THET8

Protein

30S ribosomal protein S18

Gene

rpsR

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Located on the back of the platform of the 30S subunit where it stabilizes the close packing of several RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it probably interacts with the Shine-Dalgarno helix.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-252-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S18
    Gene namesi
    Name:rpsR
    Ordered Locus Names:TTHA0243
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 888730S ribosomal protein S18PRO_0000111250Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6, also interacts with protein S11. Binds to the C-terminus of IF3 and to the central section of Era.1 Publication

    Protein-protein interaction databases

    STRINGi300852.TTHA0243.

    Structurei

    Secondary structure

    1
    88
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Turni22 – 243
    Beta strandi28 – 303
    Helixi37 – 426
    Turni45 – 473
    Helixi53 – 564
    Beta strandi59 – 613
    Helixi62 – 7615
    Beta strandi77 – 793
    Beta strandi85 – 873

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1FJGX-ray3.00R1-88[»]
    1FKAX-ray3.30R1-88[»]
    1G1XX-ray2.60C/H1-88[»]
    1GIXX-ray5.50U1-88[»]
    1HNWX-ray3.40R1-88[»]
    1HNXX-ray3.40R1-88[»]
    1HNZX-ray3.30R1-88[»]
    1HR0X-ray3.20R1-88[»]
    1I94X-ray3.20R2-88[»]
    1I95X-ray4.50R2-88[»]
    1I96X-ray4.20R2-88[»]
    1I97X-ray4.50R2-88[»]
    1IBKX-ray3.31R1-88[»]
    1IBLX-ray3.11R1-88[»]
    1IBMX-ray3.31R1-88[»]
    1J5EX-ray3.05R1-88[»]
    1JGOX-ray5.60U1-88[»]
    1JGPX-ray7.00U1-88[»]
    1JGQX-ray5.00U1-88[»]
    1L1Umodel-R16-88[»]
    1ML5electron microscopy14.00U1-88[»]
    1N32X-ray3.00R1-88[»]
    1N33X-ray3.35R1-88[»]
    1N34X-ray3.80R1-88[»]
    1N36X-ray3.65R1-88[»]
    1PNSX-ray8.70R16-88[»]
    1PNXX-ray9.50R16-88[»]
    1VOQX-ray11.50R16-88[»]
    1VOSX-ray11.50R16-88[»]
    1VOXX-ray11.50R16-88[»]
    1X18electron microscopy13.50H16-88[»]
    1XMOX-ray3.25R1-88[»]
    1XMQX-ray3.00R1-88[»]
    1XNQX-ray3.05R1-88[»]
    1XNRX-ray3.10R1-88[»]
    1YL4X-ray5.50U1-88[»]
    2B64X-ray5.90R1-88[»]
    2B9MX-ray6.76R1-88[»]
    2B9OX-ray6.46R1-88[»]
    2E5LX-ray3.30R2-88[»]
    2F4VX-ray3.80R1-88[»]
    2HGIX-ray5.00U1-88[»]
    2HGPX-ray5.50U1-88[»]
    2HGRX-ray4.51U1-88[»]
    2HHHX-ray3.35R1-88[»]
    2J00X-ray2.80R2-88[»]
    2J02X-ray2.80R2-88[»]
    2OW8X-ray3.71s1-88[»]
    2UU9X-ray3.10R2-88[»]
    2UUAX-ray2.90R2-88[»]
    2UUBX-ray2.80R2-88[»]
    2UUCX-ray3.10R2-88[»]
    2UXBX-ray3.10R2-88[»]
    2UXCX-ray2.90R2-88[»]
    2UXDX-ray3.20R2-88[»]
    2V46X-ray3.50R2-88[»]
    2V48X-ray3.50R2-88[»]
    2WDGX-ray3.30R1-88[»]
    2WDHX-ray3.30R1-88[»]
    2WDKX-ray3.50R1-88[»]
    2WDMX-ray3.50R1-88[»]
    2WH1X-ray3.45R1-88[»]
    2WH3X-ray3.45R1-88[»]
    2WRIX-ray3.60R1-88[»]
    2WRKX-ray3.60R1-88[»]
    2WRNX-ray3.60R1-88[»]
    2WRQX-ray3.60R1-88[»]
    2X9RX-ray3.10R1-88[»]
    2X9TX-ray3.10R1-88[»]
    2XFZX-ray3.20R1-88[»]
    2XG1X-ray3.20R1-88[»]
    2XQDX-ray3.10R1-88[»]
    2XSYelectron microscopy7.80R1-88[»]
    2XUYelectron microscopy7.60R1-88[»]
    2Y0UX-ray3.10R1-88[»]
    2Y0WX-ray3.10R1-88[»]
    2Y0YX-ray3.10R1-88[»]
    2Y10X-ray3.10R1-88[»]
    2Y12X-ray3.10R1-88[»]
    2Y14X-ray3.10R1-88[»]
    2Y16X-ray3.10R1-88[»]
    2Y18X-ray3.10R1-88[»]
    2ZM6X-ray3.30R2-88[»]
    3FICelectron microscopy6.40R19-88[»]
    3HUWX-ray3.10R1-88[»]
    3HUYX-ray3.10R1-88[»]
    3I8GX-ray3.10U1-88[»]
    3I8HX-ray3.10U1-88[»]
    3I9BX-ray3.50U1-88[»]
    3I9DX-ray3.50U1-88[»]
    3KIQX-ray3.30r1-88[»]
    3KISX-ray3.30r1-88[»]
    3KIUX-ray3.60r1-88[»]
    3KIXX-ray3.60r1-88[»]
    3KNHX-ray3.00R1-88[»]
    3KNJX-ray3.15R1-88[»]
    3KNLX-ray3.45R1-88[»]
    3KNNX-ray3.45R1-88[»]
    3OGEX-ray3.00R1-88[»]
    3OGYX-ray3.00R1-88[»]
    3OHCX-ray3.00R1-88[»]
    3OHDX-ray3.00R1-88[»]
    3OHYX-ray3.00R1-88[»]
    3OI0X-ray3.00R1-88[»]
    3OI2X-ray3.10R1-88[»]
    3OI4X-ray3.10R1-88[»]
    3OTOX-ray3.69R1-88[»]
    3T1HX-ray3.11R1-88[»]
    3T1YX-ray2.80R1-88[»]
    3TVFX-ray3.10U1-88[»]
    3TVGX-ray3.10U1-88[»]
    3UXSX-ray3.20R1-88[»]
    3UXTX-ray3.20R1-88[»]
    3UYDX-ray3.00U1-88[»]
    3UYFX-ray3.00U1-88[»]
    3UZ3X-ray3.30U1-88[»]
    3UZ4X-ray3.30U1-88[»]
    3UZ6X-ray3.00U1-88[»]
    3UZ7X-ray3.00U1-88[»]
    3UZGX-ray3.30U1-88[»]
    3UZIX-ray3.30U1-88[»]
    3UZLX-ray3.30U1-88[»]
    3UZMX-ray3.30U1-88[»]
    3V22X-ray3.00R1-88[»]
    3V24X-ray3.00R1-88[»]
    3V26X-ray3.10R1-88[»]
    3V28X-ray3.10R1-88[»]
    3V2CX-ray2.70R1-88[»]
    3V2EX-ray2.70R1-88[»]
    3V6UX-ray3.90R1-88[»]
    3V6VX-ray3.90R1-88[»]
    3ZN7X-ray3.10R1-88[»]
    3ZNDX-ray3.10R1-88[»]
    3ZVOX-ray3.80R1-88[»]
    4ABRX-ray3.10R1-88[»]
    4AQYX-ray3.50R1-88[»]
    4B3MX-ray2.90R1-88[»]
    4B3RX-ray3.00R1-88[»]
    4B3SX-ray3.15R1-88[»]
    4B3TX-ray3.00R1-88[»]
    4B8FX-ray3.70R1-88[»]
    4B8HX-ray3.70R1-88[»]
    4BYBX-ray3.35R1-88[»]
    4BYDX-ray3.35R1-88[»]
    4CR1X-ray2.95R1-88[»]
    4DH9X-ray3.20R1-88[»]
    4DHBX-ray3.20R1-88[»]
    4DR1X-ray3.60R1-88[»]
    4DR2X-ray3.25R1-88[»]
    4DR3X-ray3.35R1-88[»]
    4DR4X-ray3.97R1-88[»]
    4DR5X-ray3.45R1-88[»]
    4DR6X-ray3.30R1-88[»]
    4DR7X-ray3.75R1-88[»]
    4DUYX-ray3.39R1-88[»]
    4DUZX-ray3.65R1-88[»]
    4DV0X-ray3.85R1-88[»]
    4DV1X-ray3.85R1-88[»]
    4DV2X-ray3.65R1-88[»]
    4DV3X-ray3.55R1-88[»]
    4DV4X-ray3.65R1-88[»]
    4DV5X-ray3.68R1-88[»]
    4DV6X-ray3.30R1-88[»]
    4DV7X-ray3.29R1-88[»]
    4EJ9X-ray3.52R1-88[»]
    4EJAX-ray3.52R1-88[»]
    4G5KX-ray3.30U1-88[»]
    4G5MX-ray3.30U1-88[»]
    4G5TX-ray3.10U1-88[»]
    4G5VX-ray3.10U1-88[»]
    4GKJX-ray3.30R16-88[»]
    4GKKX-ray3.20R16-88[»]
    4JI0X-ray3.49R1-88[»]
    4JI1X-ray3.14R1-88[»]
    4JI2X-ray3.64R1-88[»]
    4JI3X-ray3.35R1-88[»]
    4JI4X-ray3.69R1-88[»]
    4JI5X-ray3.85R1-88[»]
    4JI6X-ray3.55R1-88[»]
    4JI7X-ray3.50R1-88[»]
    4JI8X-ray3.74R1-88[»]
    4JUWX-ray2.86R19-88[»]
    4JV5X-ray3.16R19-88[»]
    4JYAX-ray3.10R19-88[»]
    4K0KX-ray3.40R19-88[»]
    4K0LX-ray3.30R19-88[»]
    4K0PX-ray3.30R19-88[»]
    4KHPX-ray3.10R19-88[»]
    4NVUX-ray3.00R1-88[»]
    4NVWX-ray3.00R1-88[»]
    4NVYX-ray3.10R1-88[»]
    4NW0X-ray3.10R1-88[»]
    4NXMX-ray3.65R1-88[»]
    4NXNX-ray3.54R1-88[»]
    4OX9X-ray3.80R1-88[»]
    ProteinModelPortaliQ5SLQ0.
    SMRiQ5SLQ0. Positions 8-88.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ5SLQ0.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S18P family.Curated

    Phylogenomic databases

    eggNOGiCOG0238.
    HOGENOMiHOG000218466.
    KOiK02963.
    OMAiMSNRANP.
    OrthoDBiEOG6PCQ4R.
    PhylomeDBiQ5SLQ0.

    Family and domain databases

    Gene3Di4.10.640.10. 1 hit.
    HAMAPiMF_00270. Ribosomal_S18.
    InterProiIPR001648. Ribosomal_S18.
    IPR018275. Ribosomal_S18_CS.
    [Graphical view]
    PANTHERiPTHR13479. PTHR13479. 1 hit.
    PfamiPF01084. Ribosomal_S18. 1 hit.
    [Graphical view]
    PRINTSiPR00974. RIBOSOMALS18.
    ProDomiPD002239. Ribosomal_S18. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46911. SSF46911. 1 hit.
    TIGRFAMsiTIGR00165. S18. 1 hit.
    PROSITEiPS00057. RIBOSOMAL_S18. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5SLQ0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTKNAKPKK EAQRRPSRKA KVKATLGEFD LRDYRNVEVL KRFLSETGKI   50
    LPRRRTGLSA KEQRILAKTI KRARILGLLP FTEKLVRK 88
    Length:88
    Mass (Da):10,231
    Last modified:January 23, 2007 - v3
    Checksum:iCFDE7AC4953EF809
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti17 – 171S → T AA sequence (PubMed:7957245)Curated

    Mass spectrometryi

    Molecular mass is 10101 Da from positions 2 - 88. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD70066.1.
    RefSeqiYP_143509.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD70066; BAD70066; BAD70066.
    GeneIDi3169870.
    KEGGittj:TTHA0243.
    PATRICi23955431. VBITheThe93045_0243.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD70066.1 .
    RefSeqi YP_143509.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1FJG X-ray 3.00 R 1-88 [» ]
    1FKA X-ray 3.30 R 1-88 [» ]
    1G1X X-ray 2.60 C/H 1-88 [» ]
    1GIX X-ray 5.50 U 1-88 [» ]
    1HNW X-ray 3.40 R 1-88 [» ]
    1HNX X-ray 3.40 R 1-88 [» ]
    1HNZ X-ray 3.30 R 1-88 [» ]
    1HR0 X-ray 3.20 R 1-88 [» ]
    1I94 X-ray 3.20 R 2-88 [» ]
    1I95 X-ray 4.50 R 2-88 [» ]
    1I96 X-ray 4.20 R 2-88 [» ]
    1I97 X-ray 4.50 R 2-88 [» ]
    1IBK X-ray 3.31 R 1-88 [» ]
    1IBL X-ray 3.11 R 1-88 [» ]
    1IBM X-ray 3.31 R 1-88 [» ]
    1J5E X-ray 3.05 R 1-88 [» ]
    1JGO X-ray 5.60 U 1-88 [» ]
    1JGP X-ray 7.00 U 1-88 [» ]
    1JGQ X-ray 5.00 U 1-88 [» ]
    1L1U model - R 16-88 [» ]
    1ML5 electron microscopy 14.00 U 1-88 [» ]
    1N32 X-ray 3.00 R 1-88 [» ]
    1N33 X-ray 3.35 R 1-88 [» ]
    1N34 X-ray 3.80 R 1-88 [» ]
    1N36 X-ray 3.65 R 1-88 [» ]
    1PNS X-ray 8.70 R 16-88 [» ]
    1PNX X-ray 9.50 R 16-88 [» ]
    1VOQ X-ray 11.50 R 16-88 [» ]
    1VOS X-ray 11.50 R 16-88 [» ]
    1VOX X-ray 11.50 R 16-88 [» ]
    1X18 electron microscopy 13.50 H 16-88 [» ]
    1XMO X-ray 3.25 R 1-88 [» ]
    1XMQ X-ray 3.00 R 1-88 [» ]
    1XNQ X-ray 3.05 R 1-88 [» ]
    1XNR X-ray 3.10 R 1-88 [» ]
    1YL4 X-ray 5.50 U 1-88 [» ]
    2B64 X-ray 5.90 R 1-88 [» ]
    2B9M X-ray 6.76 R 1-88 [» ]
    2B9O X-ray 6.46 R 1-88 [» ]
    2E5L X-ray 3.30 R 2-88 [» ]
    2F4V X-ray 3.80 R 1-88 [» ]
    2HGI X-ray 5.00 U 1-88 [» ]
    2HGP X-ray 5.50 U 1-88 [» ]
    2HGR X-ray 4.51 U 1-88 [» ]
    2HHH X-ray 3.35 R 1-88 [» ]
    2J00 X-ray 2.80 R 2-88 [» ]
    2J02 X-ray 2.80 R 2-88 [» ]
    2OW8 X-ray 3.71 s 1-88 [» ]
    2UU9 X-ray 3.10 R 2-88 [» ]
    2UUA X-ray 2.90 R 2-88 [» ]
    2UUB X-ray 2.80 R 2-88 [» ]
    2UUC X-ray 3.10 R 2-88 [» ]
    2UXB X-ray 3.10 R 2-88 [» ]
    2UXC X-ray 2.90 R 2-88 [» ]
    2UXD X-ray 3.20 R 2-88 [» ]
    2V46 X-ray 3.50 R 2-88 [» ]
    2V48 X-ray 3.50 R 2-88 [» ]
    2WDG X-ray 3.30 R 1-88 [» ]
    2WDH X-ray 3.30 R 1-88 [» ]
    2WDK X-ray 3.50 R 1-88 [» ]
    2WDM X-ray 3.50 R 1-88 [» ]
    2WH1 X-ray 3.45 R 1-88 [» ]
    2WH3 X-ray 3.45 R 1-88 [» ]
    2WRI X-ray 3.60 R 1-88 [» ]
    2WRK X-ray 3.60 R 1-88 [» ]
    2WRN X-ray 3.60 R 1-88 [» ]
    2WRQ X-ray 3.60 R 1-88 [» ]
    2X9R X-ray 3.10 R 1-88 [» ]
    2X9T X-ray 3.10 R 1-88 [» ]
    2XFZ X-ray 3.20 R 1-88 [» ]
    2XG1 X-ray 3.20 R 1-88 [» ]
    2XQD X-ray 3.10 R 1-88 [» ]
    2XSY electron microscopy 7.80 R 1-88 [» ]
    2XUY electron microscopy 7.60 R 1-88 [» ]
    2Y0U X-ray 3.10 R 1-88 [» ]
    2Y0W X-ray 3.10 R 1-88 [» ]
    2Y0Y X-ray 3.10 R 1-88 [» ]
    2Y10 X-ray 3.10 R 1-88 [» ]
    2Y12 X-ray 3.10 R 1-88 [» ]
    2Y14 X-ray 3.10 R 1-88 [» ]
    2Y16 X-ray 3.10 R 1-88 [» ]
    2Y18 X-ray 3.10 R 1-88 [» ]
    2ZM6 X-ray 3.30 R 2-88 [» ]
    3FIC electron microscopy 6.40 R 19-88 [» ]
    3HUW X-ray 3.10 R 1-88 [» ]
    3HUY X-ray 3.10 R 1-88 [» ]
    3I8G X-ray 3.10 U 1-88 [» ]
    3I8H X-ray 3.10 U 1-88 [» ]
    3I9B X-ray 3.50 U 1-88 [» ]
    3I9D X-ray 3.50 U 1-88 [» ]
    3KIQ X-ray 3.30 r 1-88 [» ]
    3KIS X-ray 3.30 r 1-88 [» ]
    3KIU X-ray 3.60 r 1-88 [» ]
    3KIX X-ray 3.60 r 1-88 [» ]
    3KNH X-ray 3.00 R 1-88 [» ]
    3KNJ X-ray 3.15 R 1-88 [» ]
    3KNL X-ray 3.45 R 1-88 [» ]
    3KNN X-ray 3.45 R 1-88 [» ]
    3OGE X-ray 3.00 R 1-88 [» ]
    3OGY X-ray 3.00 R 1-88 [» ]
    3OHC X-ray 3.00 R 1-88 [» ]
    3OHD X-ray 3.00 R 1-88 [» ]
    3OHY X-ray 3.00 R 1-88 [» ]
    3OI0 X-ray 3.00 R 1-88 [» ]
    3OI2 X-ray 3.10 R 1-88 [» ]
    3OI4 X-ray 3.10 R 1-88 [» ]
    3OTO X-ray 3.69 R 1-88 [» ]
    3T1H X-ray 3.11 R 1-88 [» ]
    3T1Y X-ray 2.80 R 1-88 [» ]
    3TVF X-ray 3.10 U 1-88 [» ]
    3TVG X-ray 3.10 U 1-88 [» ]
    3UXS X-ray 3.20 R 1-88 [» ]
    3UXT X-ray 3.20 R 1-88 [» ]
    3UYD X-ray 3.00 U 1-88 [» ]
    3UYF X-ray 3.00 U 1-88 [» ]
    3UZ3 X-ray 3.30 U 1-88 [» ]
    3UZ4 X-ray 3.30 U 1-88 [» ]
    3UZ6 X-ray 3.00 U 1-88 [» ]
    3UZ7 X-ray 3.00 U 1-88 [» ]
    3UZG X-ray 3.30 U 1-88 [» ]
    3UZI X-ray 3.30 U 1-88 [» ]
    3UZL X-ray 3.30 U 1-88 [» ]
    3UZM X-ray 3.30 U 1-88 [» ]
    3V22 X-ray 3.00 R 1-88 [» ]
    3V24 X-ray 3.00 R 1-88 [» ]
    3V26 X-ray 3.10 R 1-88 [» ]
    3V28 X-ray 3.10 R 1-88 [» ]
    3V2C X-ray 2.70 R 1-88 [» ]
    3V2E X-ray 2.70 R 1-88 [» ]
    3V6U X-ray 3.90 R 1-88 [» ]
    3V6V X-ray 3.90 R 1-88 [» ]
    3ZN7 X-ray 3.10 R 1-88 [» ]
    3ZND X-ray 3.10 R 1-88 [» ]
    3ZVO X-ray 3.80 R 1-88 [» ]
    4ABR X-ray 3.10 R 1-88 [» ]
    4AQY X-ray 3.50 R 1-88 [» ]
    4B3M X-ray 2.90 R 1-88 [» ]
    4B3R X-ray 3.00 R 1-88 [» ]
    4B3S X-ray 3.15 R 1-88 [» ]
    4B3T X-ray 3.00 R 1-88 [» ]
    4B8F X-ray 3.70 R 1-88 [» ]
    4B8H X-ray 3.70 R 1-88 [» ]
    4BYB X-ray 3.35 R 1-88 [» ]
    4BYD X-ray 3.35 R 1-88 [» ]
    4CR1 X-ray 2.95 R 1-88 [» ]
    4DH9 X-ray 3.20 R 1-88 [» ]
    4DHB X-ray 3.20 R 1-88 [» ]
    4DR1 X-ray 3.60 R 1-88 [» ]
    4DR2 X-ray 3.25 R 1-88 [» ]
    4DR3 X-ray 3.35 R 1-88 [» ]
    4DR4 X-ray 3.97 R 1-88 [» ]
    4DR5 X-ray 3.45 R 1-88 [» ]
    4DR6 X-ray 3.30 R 1-88 [» ]
    4DR7 X-ray 3.75 R 1-88 [» ]
    4DUY X-ray 3.39 R 1-88 [» ]
    4DUZ X-ray 3.65 R 1-88 [» ]
    4DV0 X-ray 3.85 R 1-88 [» ]
    4DV1 X-ray 3.85 R 1-88 [» ]
    4DV2 X-ray 3.65 R 1-88 [» ]
    4DV3 X-ray 3.55 R 1-88 [» ]
    4DV4 X-ray 3.65 R 1-88 [» ]
    4DV5 X-ray 3.68 R 1-88 [» ]
    4DV6 X-ray 3.30 R 1-88 [» ]
    4DV7 X-ray 3.29 R 1-88 [» ]
    4EJ9 X-ray 3.52 R 1-88 [» ]
    4EJA X-ray 3.52 R 1-88 [» ]
    4G5K X-ray 3.30 U 1-88 [» ]
    4G5M X-ray 3.30 U 1-88 [» ]
    4G5T X-ray 3.10 U 1-88 [» ]
    4G5V X-ray 3.10 U 1-88 [» ]
    4GKJ X-ray 3.30 R 16-88 [» ]
    4GKK X-ray 3.20 R 16-88 [» ]
    4JI0 X-ray 3.49 R 1-88 [» ]
    4JI1 X-ray 3.14 R 1-88 [» ]
    4JI2 X-ray 3.64 R 1-88 [» ]
    4JI3 X-ray 3.35 R 1-88 [» ]
    4JI4 X-ray 3.69 R 1-88 [» ]
    4JI5 X-ray 3.85 R 1-88 [» ]
    4JI6 X-ray 3.55 R 1-88 [» ]
    4JI7 X-ray 3.50 R 1-88 [» ]
    4JI8 X-ray 3.74 R 1-88 [» ]
    4JUW X-ray 2.86 R 19-88 [» ]
    4JV5 X-ray 3.16 R 19-88 [» ]
    4JYA X-ray 3.10 R 19-88 [» ]
    4K0K X-ray 3.40 R 19-88 [» ]
    4K0L X-ray 3.30 R 19-88 [» ]
    4K0P X-ray 3.30 R 19-88 [» ]
    4KHP X-ray 3.10 R 19-88 [» ]
    4NVU X-ray 3.00 R 1-88 [» ]
    4NVW X-ray 3.00 R 1-88 [» ]
    4NVY X-ray 3.10 R 1-88 [» ]
    4NW0 X-ray 3.10 R 1-88 [» ]
    4NXM X-ray 3.65 R 1-88 [» ]
    4NXN X-ray 3.54 R 1-88 [» ]
    4OX9 X-ray 3.80 R 1-88 [» ]
    ProteinModelPortali Q5SLQ0.
    SMRi Q5SLQ0. Positions 8-88.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA0243.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD70066 ; BAD70066 ; BAD70066 .
    GeneIDi 3169870.
    KEGGi ttj:TTHA0243.
    PATRICi 23955431. VBITheThe93045_0243.

    Phylogenomic databases

    eggNOGi COG0238.
    HOGENOMi HOG000218466.
    KOi K02963.
    OMAi MSNRANP.
    OrthoDBi EOG6PCQ4R.
    PhylomeDBi Q5SLQ0.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-252-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q5SLQ0.

    Family and domain databases

    Gene3Di 4.10.640.10. 1 hit.
    HAMAPi MF_00270. Ribosomal_S18.
    InterProi IPR001648. Ribosomal_S18.
    IPR018275. Ribosomal_S18_CS.
    [Graphical view ]
    PANTHERi PTHR13479. PTHR13479. 1 hit.
    Pfami PF01084. Ribosomal_S18. 1 hit.
    [Graphical view ]
    PRINTSi PR00974. RIBOSOMALS18.
    ProDomi PD002239. Ribosomal_S18. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46911. SSF46911. 1 hit.
    TIGRFAMsi TIGR00165. S18. 1 hit.
    PROSITEi PS00057. RIBOSOMAL_S18. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    2. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-26.
    3. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    4. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    5. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    6. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain."
      Agalarov S.C., Prasad G.S., Funke P.M., Stout C.D., Williamson J.R.
      Science 288:107-113(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF A 30S SUBUNIT FRAGMENT.
    9. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    10. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    11. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    12. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    13. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    14. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    15. "Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly."
      Sharma M.R., Barat C., Wilson D.N., Booth T.M., Kawazoe M., Hori-Takemoto C., Shirouzu M., Yokoyama S., Fucini P., Agrawal R.K.
      Mol. Cell 18:319-329(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (13.50 ANGSTROMS), INTERACTION WITH ERA.

    Entry informationi

    Entry nameiRS18_THET8
    AccessioniPrimary (citable) accession number: Q5SLQ0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 26, 2005
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 94 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3