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Q5SLP8

- RS6_THET8

UniProt

Q5SLP8 - RS6_THET8

Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Located on the outer edge of the platform on the body of the 30S subunit.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-254-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S6
    Alternative name(s):
    TS9
    Gene namesi
    Name:rpsF
    Ordered Locus Names:TTHA0245
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 10110130S ribosomal protein S6PRO_0000176863Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S18. May make transient contacts with protein L2 of the 50S subunit during translation.

    Protein-protein interaction databases

    STRINGi300852.TTHA0245.

    Structurei

    Secondary structure

    1
    101
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi2 – 109
    Beta strandi12 – 143
    Helixi16 – 3015
    Helixi31 – 333
    Beta strandi36 – 394
    Beta strandi40 – 423
    Beta strandi44 – 529
    Beta strandi55 – 573
    Beta strandi60 – 667
    Helixi69 – 8012
    Beta strandi82 – 843
    Beta strandi85 – 928
    Beta strandi97 – 1004

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1FJGX-ray3.00F1-101[»]
    1FKAX-ray3.30F1-101[»]
    1G1XX-ray2.60A/F1-98[»]
    1GIXX-ray5.50I1-101[»]
    1HNWX-ray3.40F1-101[»]
    1HNXX-ray3.40F1-101[»]
    1HNZX-ray3.30F1-101[»]
    1HR0X-ray3.20F1-101[»]
    1I94X-ray3.20F1-101[»]
    1I95X-ray4.50F1-101[»]
    1I96X-ray4.20F1-101[»]
    1I97X-ray4.50F1-101[»]
    1IBKX-ray3.31F1-101[»]
    1IBLX-ray3.11F1-101[»]
    1IBMX-ray3.31F1-101[»]
    1J5EX-ray3.05F1-101[»]
    1JGOX-ray5.60I1-101[»]
    1JGPX-ray7.00I1-101[»]
    1JGQX-ray5.00I1-101[»]
    1L1Umodel-F1-101[»]
    1ML5electron microscopy14.00I1-101[»]
    1N32X-ray3.00F1-101[»]
    1N33X-ray3.35F1-101[»]
    1N34X-ray3.80F1-101[»]
    1N36X-ray3.65F1-101[»]
    1PNSX-ray8.70F1-101[»]
    1PNXX-ray9.50F1-101[»]
    1QD7X-ray5.50E1-97[»]
    1XMOX-ray3.25F1-101[»]
    1XMQX-ray3.00F1-101[»]
    1XNQX-ray3.05F1-101[»]
    1XNRX-ray3.10F1-101[»]
    1YL4X-ray5.50I1-101[»]
    2B64X-ray5.90F1-101[»]
    2B9MX-ray6.76F1-101[»]
    2B9OX-ray6.46F1-101[»]
    2E5LX-ray3.30F1-101[»]
    2F4VX-ray3.80F1-101[»]
    2HGIX-ray5.00I1-101[»]
    2HGPX-ray5.50I1-101[»]
    2HGRX-ray4.51I1-101[»]
    2HHHX-ray3.35F1-101[»]
    2J00X-ray2.80F1-101[»]
    2J02X-ray2.80F1-101[»]
    2KJVNMR-A1-101[»]
    2KJWNMR-A3-54[»]
    2OW8X-ray3.71g-[»]
    2UU9X-ray3.10F1-101[»]
    2UUAX-ray2.90F1-101[»]
    2UUBX-ray2.90F1-101[»]
    2UUCX-ray3.10F1-101[»]
    2UXBX-ray3.10F1-101[»]
    2UXCX-ray2.90F1-101[»]
    2UXDX-ray3.20F1-101[»]
    2V46X-ray3.80F1-101[»]
    2V48X-ray3.80F1-101[»]
    2VQEX-ray2.50F1-101[»]
    2VQFX-ray2.90F1-101[»]
    2WDGX-ray3.30F1-101[»]
    2WDHX-ray3.30F1-101[»]
    2WDKX-ray3.50F1-101[»]
    2WDMX-ray3.50F1-101[»]
    2WH1X-ray3.45F1-101[»]
    2WH3X-ray3.45F1-101[»]
    2WRIX-ray3.60F1-101[»]
    2WRKX-ray3.60F1-101[»]
    2WRNX-ray3.60F1-101[»]
    2WRQX-ray3.60F1-101[»]
    2X9RX-ray3.10F1-101[»]
    2X9TX-ray3.10F1-101[»]
    2XFZX-ray3.20F1-101[»]
    2XG1X-ray3.20F1-101[»]
    2XQDX-ray3.10F1-101[»]
    2XSYelectron microscopy7.80F1-101[»]
    2XUYelectron microscopy7.60F1-101[»]
    2Y0UX-ray3.10F1-101[»]
    2Y0WX-ray3.10F1-101[»]
    2Y0YX-ray3.10F1-101[»]
    2Y10X-ray3.10F1-101[»]
    2Y12X-ray3.10F1-101[»]
    2Y14X-ray3.10F1-101[»]
    2Y16X-ray3.10F1-101[»]
    2Y18X-ray3.10F1-101[»]
    2ZM6X-ray3.30F1-101[»]
    3FICelectron microscopy6.40F1-101[»]
    3HUWX-ray3.10F1-101[»]
    3HUYX-ray3.10F1-101[»]
    3I8GX-ray3.10I1-101[»]
    3I8HX-ray3.10I1-101[»]
    3I9BX-ray3.50I1-101[»]
    3I9DX-ray3.50I1-101[»]
    3KIQX-ray3.30f1-101[»]
    3KISX-ray3.30f1-101[»]
    3KIUX-ray3.60f1-101[»]
    3KIXX-ray3.60f1-101[»]
    3KNHX-ray3.00F1-101[»]
    3KNJX-ray3.15F1-101[»]
    3KNLX-ray3.45F1-101[»]
    3KNNX-ray3.45F1-101[»]
    3OGEX-ray3.00F1-101[»]
    3OGYX-ray3.00F1-101[»]
    3OHCX-ray3.00F1-101[»]
    3OHDX-ray3.00F1-101[»]
    3OHYX-ray3.00F1-101[»]
    3OI0X-ray3.00F1-101[»]
    3OI2X-ray3.10F1-101[»]
    3OI4X-ray3.10F1-101[»]
    3OTOX-ray3.69F1-101[»]
    3T1HX-ray3.11F1-101[»]
    3T1YX-ray2.80F1-101[»]
    3TVFX-ray3.10I1-101[»]
    3TVGX-ray3.10I1-101[»]
    3UXSX-ray3.20F1-101[»]
    3UXTX-ray3.20F1-101[»]
    3UYDX-ray3.00I1-101[»]
    3UYFX-ray3.00I1-101[»]
    3UZ3X-ray3.30I1-101[»]
    3UZ4X-ray3.30I1-101[»]
    3UZ6X-ray3.00I1-101[»]
    3UZ7X-ray3.00I1-101[»]
    3UZGX-ray3.30I1-101[»]
    3UZIX-ray3.30I1-101[»]
    3UZLX-ray3.30I1-101[»]
    3UZMX-ray3.30I1-101[»]
    3V22X-ray3.00F1-101[»]
    3V24X-ray3.00F1-101[»]
    3V26X-ray3.10F1-101[»]
    3V28X-ray3.10F1-101[»]
    3V2CX-ray2.70F1-101[»]
    3V2EX-ray2.70F1-101[»]
    3V6UX-ray3.90F1-101[»]
    3V6VX-ray3.90F1-101[»]
    3ZN7X-ray3.10F1-101[»]
    3ZNDX-ray3.10F1-101[»]
    3ZVOX-ray3.80F1-101[»]
    3ZZPX-ray0.96A55-100[»]
    4ABRX-ray3.10F1-101[»]
    4AQYX-ray3.50F1-101[»]
    4B3MX-ray2.90F1-101[»]
    4B3RX-ray3.00F1-101[»]
    4B3SX-ray3.15F1-101[»]
    4B3TX-ray3.00F1-101[»]
    4B8FX-ray3.70F1-101[»]
    4B8HX-ray3.70F1-101[»]
    4BYDX-ray3.35F1-101[»]
    4CR1X-ray2.95F1-101[»]
    4DH9X-ray3.20F1-101[»]
    4DHBX-ray3.20F1-101[»]
    4DR1X-ray3.60F1-101[»]
    4DR2X-ray3.25F1-101[»]
    4DR3X-ray3.35F1-101[»]
    4DR4X-ray3.97F1-101[»]
    4DR5X-ray3.45F1-101[»]
    4DR6X-ray3.30F1-101[»]
    4DR7X-ray3.75F1-101[»]
    4DUYX-ray3.39F1-101[»]
    4DUZX-ray3.65F1-101[»]
    4DV0X-ray3.85F1-101[»]
    4DV1X-ray3.85F1-101[»]
    4DV2X-ray3.65F1-101[»]
    4DV3X-ray3.55F1-101[»]
    4DV4X-ray3.65F1-101[»]
    4DV5X-ray3.68F1-101[»]
    4DV6X-ray3.30F1-101[»]
    4DV7X-ray3.29F1-101[»]
    4EJ9X-ray3.52F1-101[»]
    4EJAX-ray3.52F1-101[»]
    4G5KX-ray3.30I1-101[»]
    4G5MX-ray3.30I1-101[»]
    4G5TX-ray3.10I1-101[»]
    4G5VX-ray3.10I1-101[»]
    4GKJX-ray3.30F1-101[»]
    4GKKX-ray3.20F1-101[»]
    4JI0X-ray3.49F1-101[»]
    4JI1X-ray3.14F1-101[»]
    4JI2X-ray3.64F1-101[»]
    4JI3X-ray3.35F1-101[»]
    4JI4X-ray3.69F1-101[»]
    4JI5X-ray3.85F1-101[»]
    4JI6X-ray3.55F1-101[»]
    4JI7X-ray3.50F1-101[»]
    4JI8X-ray3.74F1-101[»]
    4JUWX-ray2.86F1-101[»]
    4JV5X-ray3.16F1-101[»]
    4JYAX-ray3.10F1-101[»]
    4K0KX-ray3.40F1-101[»]
    4K0LX-ray3.30F1-101[»]
    4K0PX-ray3.30F1-101[»]
    4KHPX-ray3.10F1-101[»]
    4NVUX-ray3.00F1-101[»]
    4NVWX-ray3.00F1-101[»]
    4NVYX-ray3.10F1-101[»]
    4NW0X-ray3.10F1-101[»]
    4NXMX-ray3.65F1-101[»]
    4NXNX-ray3.54F1-101[»]
    4OX9X-ray3.80F1-101[»]
    ProteinModelPortaliQ5SLP8.
    SMRiQ5SLP8. Positions 1-101.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ5SLP8.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S6P family.Curated

    Phylogenomic databases

    eggNOGiCOG0360.
    HOGENOMiHOG000040440.
    KOiK02990.
    OMAiRRYELMI.
    OrthoDBiEOG6P33DH.
    PhylomeDBiQ5SLP8.

    Family and domain databases

    Gene3Di3.30.70.60. 1 hit.
    HAMAPiMF_00360. Ribosomal_S6.
    InterProiIPR000529. Ribosomal_S6.
    IPR020815. Ribosomal_S6_CS.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view]
    PfamiPF01250. Ribosomal_S6. 1 hit.
    [Graphical view]
    SUPFAMiSSF54995. SSF54995. 1 hit.
    TIGRFAMsiTIGR00166. S6. 1 hit.
    PROSITEiPS01048. RIBOSOMAL_S6. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5SLP8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRYEVNIVL NPNLDQSQLA LEKEIIQRAL ENYGARVEKV EELGLRRLAY    50
    PIAKDPQGYF LWYQVEMPED RVNDLARELR IRDNVRRVMV VKSQEPFLAN 100
    A 101
    Length:101
    Mass (Da):11,973
    Last modified:December 21, 2004 - v1
    Checksum:i4FEE8005C74902E5
    GO

    Mass spectrometryi

    Molecular mass is 11973 Da from positions 1 - 101. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD70068.1.
    RefSeqiYP_143511.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD70068; BAD70068; BAD70068.
    GeneIDi3168355.
    KEGGittj:TTHA0245.
    PATRICi23955435. VBITheThe93045_0245.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008226 Genomic DNA. Translation: BAD70068.1 .
    RefSeqi YP_143511.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1FJG X-ray 3.00 F 1-101 [» ]
    1FKA X-ray 3.30 F 1-101 [» ]
    1G1X X-ray 2.60 A/F 1-98 [» ]
    1GIX X-ray 5.50 I 1-101 [» ]
    1HNW X-ray 3.40 F 1-101 [» ]
    1HNX X-ray 3.40 F 1-101 [» ]
    1HNZ X-ray 3.30 F 1-101 [» ]
    1HR0 X-ray 3.20 F 1-101 [» ]
    1I94 X-ray 3.20 F 1-101 [» ]
    1I95 X-ray 4.50 F 1-101 [» ]
    1I96 X-ray 4.20 F 1-101 [» ]
    1I97 X-ray 4.50 F 1-101 [» ]
    1IBK X-ray 3.31 F 1-101 [» ]
    1IBL X-ray 3.11 F 1-101 [» ]
    1IBM X-ray 3.31 F 1-101 [» ]
    1J5E X-ray 3.05 F 1-101 [» ]
    1JGO X-ray 5.60 I 1-101 [» ]
    1JGP X-ray 7.00 I 1-101 [» ]
    1JGQ X-ray 5.00 I 1-101 [» ]
    1L1U model - F 1-101 [» ]
    1ML5 electron microscopy 14.00 I 1-101 [» ]
    1N32 X-ray 3.00 F 1-101 [» ]
    1N33 X-ray 3.35 F 1-101 [» ]
    1N34 X-ray 3.80 F 1-101 [» ]
    1N36 X-ray 3.65 F 1-101 [» ]
    1PNS X-ray 8.70 F 1-101 [» ]
    1PNX X-ray 9.50 F 1-101 [» ]
    1QD7 X-ray 5.50 E 1-97 [» ]
    1XMO X-ray 3.25 F 1-101 [» ]
    1XMQ X-ray 3.00 F 1-101 [» ]
    1XNQ X-ray 3.05 F 1-101 [» ]
    1XNR X-ray 3.10 F 1-101 [» ]
    1YL4 X-ray 5.50 I 1-101 [» ]
    2B64 X-ray 5.90 F 1-101 [» ]
    2B9M X-ray 6.76 F 1-101 [» ]
    2B9O X-ray 6.46 F 1-101 [» ]
    2E5L X-ray 3.30 F 1-101 [» ]
    2F4V X-ray 3.80 F 1-101 [» ]
    2HGI X-ray 5.00 I 1-101 [» ]
    2HGP X-ray 5.50 I 1-101 [» ]
    2HGR X-ray 4.51 I 1-101 [» ]
    2HHH X-ray 3.35 F 1-101 [» ]
    2J00 X-ray 2.80 F 1-101 [» ]
    2J02 X-ray 2.80 F 1-101 [» ]
    2KJV NMR - A 1-101 [» ]
    2KJW NMR - A 3-54 [» ]
    2OW8 X-ray 3.71 g - [» ]
    2UU9 X-ray 3.10 F 1-101 [» ]
    2UUA X-ray 2.90 F 1-101 [» ]
    2UUB X-ray 2.90 F 1-101 [» ]
    2UUC X-ray 3.10 F 1-101 [» ]
    2UXB X-ray 3.10 F 1-101 [» ]
    2UXC X-ray 2.90 F 1-101 [» ]
    2UXD X-ray 3.20 F 1-101 [» ]
    2V46 X-ray 3.80 F 1-101 [» ]
    2V48 X-ray 3.80 F 1-101 [» ]
    2VQE X-ray 2.50 F 1-101 [» ]
    2VQF X-ray 2.90 F 1-101 [» ]
    2WDG X-ray 3.30 F 1-101 [» ]
    2WDH X-ray 3.30 F 1-101 [» ]
    2WDK X-ray 3.50 F 1-101 [» ]
    2WDM X-ray 3.50 F 1-101 [» ]
    2WH1 X-ray 3.45 F 1-101 [» ]
    2WH3 X-ray 3.45 F 1-101 [» ]
    2WRI X-ray 3.60 F 1-101 [» ]
    2WRK X-ray 3.60 F 1-101 [» ]
    2WRN X-ray 3.60 F 1-101 [» ]
    2WRQ X-ray 3.60 F 1-101 [» ]
    2X9R X-ray 3.10 F 1-101 [» ]
    2X9T X-ray 3.10 F 1-101 [» ]
    2XFZ X-ray 3.20 F 1-101 [» ]
    2XG1 X-ray 3.20 F 1-101 [» ]
    2XQD X-ray 3.10 F 1-101 [» ]
    2XSY electron microscopy 7.80 F 1-101 [» ]
    2XUY electron microscopy 7.60 F 1-101 [» ]
    2Y0U X-ray 3.10 F 1-101 [» ]
    2Y0W X-ray 3.10 F 1-101 [» ]
    2Y0Y X-ray 3.10 F 1-101 [» ]
    2Y10 X-ray 3.10 F 1-101 [» ]
    2Y12 X-ray 3.10 F 1-101 [» ]
    2Y14 X-ray 3.10 F 1-101 [» ]
    2Y16 X-ray 3.10 F 1-101 [» ]
    2Y18 X-ray 3.10 F 1-101 [» ]
    2ZM6 X-ray 3.30 F 1-101 [» ]
    3FIC electron microscopy 6.40 F 1-101 [» ]
    3HUW X-ray 3.10 F 1-101 [» ]
    3HUY X-ray 3.10 F 1-101 [» ]
    3I8G X-ray 3.10 I 1-101 [» ]
    3I8H X-ray 3.10 I 1-101 [» ]
    3I9B X-ray 3.50 I 1-101 [» ]
    3I9D X-ray 3.50 I 1-101 [» ]
    3KIQ X-ray 3.30 f 1-101 [» ]
    3KIS X-ray 3.30 f 1-101 [» ]
    3KIU X-ray 3.60 f 1-101 [» ]
    3KIX X-ray 3.60 f 1-101 [» ]
    3KNH X-ray 3.00 F 1-101 [» ]
    3KNJ X-ray 3.15 F 1-101 [» ]
    3KNL X-ray 3.45 F 1-101 [» ]
    3KNN X-ray 3.45 F 1-101 [» ]
    3OGE X-ray 3.00 F 1-101 [» ]
    3OGY X-ray 3.00 F 1-101 [» ]
    3OHC X-ray 3.00 F 1-101 [» ]
    3OHD X-ray 3.00 F 1-101 [» ]
    3OHY X-ray 3.00 F 1-101 [» ]
    3OI0 X-ray 3.00 F 1-101 [» ]
    3OI2 X-ray 3.10 F 1-101 [» ]
    3OI4 X-ray 3.10 F 1-101 [» ]
    3OTO X-ray 3.69 F 1-101 [» ]
    3T1H X-ray 3.11 F 1-101 [» ]
    3T1Y X-ray 2.80 F 1-101 [» ]
    3TVF X-ray 3.10 I 1-101 [» ]
    3TVG X-ray 3.10 I 1-101 [» ]
    3UXS X-ray 3.20 F 1-101 [» ]
    3UXT X-ray 3.20 F 1-101 [» ]
    3UYD X-ray 3.00 I 1-101 [» ]
    3UYF X-ray 3.00 I 1-101 [» ]
    3UZ3 X-ray 3.30 I 1-101 [» ]
    3UZ4 X-ray 3.30 I 1-101 [» ]
    3UZ6 X-ray 3.00 I 1-101 [» ]
    3UZ7 X-ray 3.00 I 1-101 [» ]
    3UZG X-ray 3.30 I 1-101 [» ]
    3UZI X-ray 3.30 I 1-101 [» ]
    3UZL X-ray 3.30 I 1-101 [» ]
    3UZM X-ray 3.30 I 1-101 [» ]
    3V22 X-ray 3.00 F 1-101 [» ]
    3V24 X-ray 3.00 F 1-101 [» ]
    3V26 X-ray 3.10 F 1-101 [» ]
    3V28 X-ray 3.10 F 1-101 [» ]
    3V2C X-ray 2.70 F 1-101 [» ]
    3V2E X-ray 2.70 F 1-101 [» ]
    3V6U X-ray 3.90 F 1-101 [» ]
    3V6V X-ray 3.90 F 1-101 [» ]
    3ZN7 X-ray 3.10 F 1-101 [» ]
    3ZND X-ray 3.10 F 1-101 [» ]
    3ZVO X-ray 3.80 F 1-101 [» ]
    3ZZP X-ray 0.96 A 55-100 [» ]
    4ABR X-ray 3.10 F 1-101 [» ]
    4AQY X-ray 3.50 F 1-101 [» ]
    4B3M X-ray 2.90 F 1-101 [» ]
    4B3R X-ray 3.00 F 1-101 [» ]
    4B3S X-ray 3.15 F 1-101 [» ]
    4B3T X-ray 3.00 F 1-101 [» ]
    4B8F X-ray 3.70 F 1-101 [» ]
    4B8H X-ray 3.70 F 1-101 [» ]
    4BYD X-ray 3.35 F 1-101 [» ]
    4CR1 X-ray 2.95 F 1-101 [» ]
    4DH9 X-ray 3.20 F 1-101 [» ]
    4DHB X-ray 3.20 F 1-101 [» ]
    4DR1 X-ray 3.60 F 1-101 [» ]
    4DR2 X-ray 3.25 F 1-101 [» ]
    4DR3 X-ray 3.35 F 1-101 [» ]
    4DR4 X-ray 3.97 F 1-101 [» ]
    4DR5 X-ray 3.45 F 1-101 [» ]
    4DR6 X-ray 3.30 F 1-101 [» ]
    4DR7 X-ray 3.75 F 1-101 [» ]
    4DUY X-ray 3.39 F 1-101 [» ]
    4DUZ X-ray 3.65 F 1-101 [» ]
    4DV0 X-ray 3.85 F 1-101 [» ]
    4DV1 X-ray 3.85 F 1-101 [» ]
    4DV2 X-ray 3.65 F 1-101 [» ]
    4DV3 X-ray 3.55 F 1-101 [» ]
    4DV4 X-ray 3.65 F 1-101 [» ]
    4DV5 X-ray 3.68 F 1-101 [» ]
    4DV6 X-ray 3.30 F 1-101 [» ]
    4DV7 X-ray 3.29 F 1-101 [» ]
    4EJ9 X-ray 3.52 F 1-101 [» ]
    4EJA X-ray 3.52 F 1-101 [» ]
    4G5K X-ray 3.30 I 1-101 [» ]
    4G5M X-ray 3.30 I 1-101 [» ]
    4G5T X-ray 3.10 I 1-101 [» ]
    4G5V X-ray 3.10 I 1-101 [» ]
    4GKJ X-ray 3.30 F 1-101 [» ]
    4GKK X-ray 3.20 F 1-101 [» ]
    4JI0 X-ray 3.49 F 1-101 [» ]
    4JI1 X-ray 3.14 F 1-101 [» ]
    4JI2 X-ray 3.64 F 1-101 [» ]
    4JI3 X-ray 3.35 F 1-101 [» ]
    4JI4 X-ray 3.69 F 1-101 [» ]
    4JI5 X-ray 3.85 F 1-101 [» ]
    4JI6 X-ray 3.55 F 1-101 [» ]
    4JI7 X-ray 3.50 F 1-101 [» ]
    4JI8 X-ray 3.74 F 1-101 [» ]
    4JUW X-ray 2.86 F 1-101 [» ]
    4JV5 X-ray 3.16 F 1-101 [» ]
    4JYA X-ray 3.10 F 1-101 [» ]
    4K0K X-ray 3.40 F 1-101 [» ]
    4K0L X-ray 3.30 F 1-101 [» ]
    4K0P X-ray 3.30 F 1-101 [» ]
    4KHP X-ray 3.10 F 1-101 [» ]
    4NVU X-ray 3.00 F 1-101 [» ]
    4NVW X-ray 3.00 F 1-101 [» ]
    4NVY X-ray 3.10 F 1-101 [» ]
    4NW0 X-ray 3.10 F 1-101 [» ]
    4NXM X-ray 3.65 F 1-101 [» ]
    4NXN X-ray 3.54 F 1-101 [» ]
    4OX9 X-ray 3.80 F 1-101 [» ]
    ProteinModelPortali Q5SLP8.
    SMRi Q5SLP8. Positions 1-101.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA0245.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD70068 ; BAD70068 ; BAD70068 .
    GeneIDi 3168355.
    KEGGi ttj:TTHA0245.
    PATRICi 23955435. VBITheThe93045_0245.

    Phylogenomic databases

    eggNOGi COG0360.
    HOGENOMi HOG000040440.
    KOi K02990.
    OMAi RRYELMI.
    OrthoDBi EOG6P33DH.
    PhylomeDBi Q5SLP8.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-254-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q5SLP8.

    Family and domain databases

    Gene3Di 3.30.70.60. 1 hit.
    HAMAPi MF_00360. Ribosomal_S6.
    InterProi IPR000529. Ribosomal_S6.
    IPR020815. Ribosomal_S6_CS.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view ]
    Pfami PF01250. Ribosomal_S6. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54995. SSF54995. 1 hit.
    TIGRFAMsi TIGR00166. S6. 1 hit.
    PROSITEi PS01048. RIBOSOMAL_S6. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    2. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 1-16.
    3. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    4. "Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution."
      Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P., Capel M.S., Ramakrishnan V.
      Nature 400:833-840(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT.
    5. "Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain."
      Agalarov S.C., Prasad G.S., Funke P.M., Stout C.D., Williamson J.R.
      Science 288:107-113(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF A 30S SUBUNIT FRAGMENT.
    6. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    9. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    10. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    11. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    12. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    13. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    14. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    15. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

    Entry informationi

    Entry nameiRS6_THET8
    AccessioniPrimary (citable) accession number: Q5SLP8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 89 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3