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Protein
Submitted name:

RNA 2'-O ribose methyltransferase

Gene

TTHA0275

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-289-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RNA 2'-O ribose methyltransferaseImported
Gene namesi
Ordered Locus Names:TTHA0275Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA0275.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4X3LX-ray1.70A/B1-260[»]
4X3MX-ray1.85A/B1-260[»]
ProteinModelPortaliQ5SLL8.
SMRiQ5SLL8. Positions 1-255.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 9970SpoU_sub_bindInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108RWN. Bacteria.
COG0566. LUCA.
HOGENOMiHOG000218799.
KOiK03437.
OMAiVGCVFTN.
OrthoDBiEOG6GBMDM.
PhylomeDBiQ5SLL8.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
3.40.1280.10. 1 hit.
InterProiIPR029028. Alpha/beta_knot_MTases.
IPR029064. L30e-like.
IPR001537. SpoU_MeTrfase.
IPR013123. SpoU_subst-bd.
IPR029026. tRNA_m1G_MTases_N.
[Graphical view]
PfamiPF00588. SpoU_methylase. 1 hit.
[Graphical view]
SMARTiSM00967. SpoU_sub_bind. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
SSF75217. SSF75217. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SLL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIESPQNPR VKALAALKER KERERTGRFL VEGRREVERA LEAGLSLETL
60 70 80 90 100
LLGPKARPED RALAGGAEVL ELSERALARV STRENPAQVL GVFRLPRRSL
110 120 130 140 150
AGVTLGAAPL VLVLLGLEKP GNLGAILRAA DGAGADLVLV AEGVDLFSPQ
160 170 180 190 200
VIRNSTGAVF ALPVYPVAEG EAARFLEEHN LPLVAATPEG ERLYWEGDYR
210 220 230 240 250
GGVAFLLGAE DKGLPEAWKR RAQVRVRIPM RGRADSLNVA VTAALLLYEA
260
LRQRSGGAPL
Length:260
Mass (Da):27,998
Last modified:December 21, 2004 - v1
Checksum:iFBF19A1BF28669BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70098.1.
RefSeqiWP_011227823.1. NC_006461.1.
YP_143541.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD70098; BAD70098; BAD70098.
GeneIDi3168330.
KEGGittj:TTHA0275.
PATRICi23955505. VBITheThe93045_0275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70098.1.
RefSeqiWP_011227823.1. NC_006461.1.
YP_143541.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4X3LX-ray1.70A/B1-260[»]
4X3MX-ray1.85A/B1-260[»]
ProteinModelPortaliQ5SLL8.
SMRiQ5SLL8. Positions 1-255.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA0275.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD70098; BAD70098; BAD70098.
GeneIDi3168330.
KEGGittj:TTHA0275.
PATRICi23955505. VBITheThe93045_0275.

Phylogenomic databases

eggNOGiENOG4108RWN. Bacteria.
COG0566. LUCA.
HOGENOMiHOG000218799.
KOiK03437.
OMAiVGCVFTN.
OrthoDBiEOG6GBMDM.
PhylomeDBiQ5SLL8.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-289-MONOMER.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
3.40.1280.10. 1 hit.
InterProiIPR029028. Alpha/beta_knot_MTases.
IPR029064. L30e-like.
IPR001537. SpoU_MeTrfase.
IPR013123. SpoU_subst-bd.
IPR029026. tRNA_m1G_MTases_N.
[Graphical view]
PfamiPF00588. SpoU_methylase. 1 hit.
[Graphical view]
SMARTiSM00967. SpoU_sub_bind. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
SSF75217. SSF75217. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579Imported.
  2. "Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)."
    Demirci H., Belardinelli R., Jogl G.
    Submitted (DEC-2014) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS).

Entry informationi

Entry nameiQ5SLL8_THET8
AccessioniPrimary (citable) accession number: Q5SLL8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: May 11, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.